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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR1966c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_A_member_5-like_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031902 C late endosome membrane
GO:0033344 P cholesterol efflux
GO:0034375 P high-density lipoprotein particle remodeling
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043691 P reverse cholesterol transport
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:5.21 TPM:5.11
ORF EntryO_TrvaFAMAMG1140_complete:A_TrvaFAMAMG_TR1966c0_g1_i1
Sequence
(Nucleotide)
TTCGGGGCGCGCTGTGCGTACATTCAAGTAGCCGGTAGTACCGCGTCCGATTCGAACCGA
TATCAAAAACATAATAAATTGTACACAACTACAATGTTATAGTGCGTTAACCAGTGATCG
TATCAAGTTATATTTCGTGTGTCAGTGCTGTTGTTTGCATGAGTGTTATTGATGCGGGAG
GTCGGGACGATGGACGTGACACGCCGGCCGGCACTGAAAAGCTAACGAAATGCTCGGAGA
AGGAGTCGATAGGGGTGGATTGCGCCGCCGTGGGTAGTCACCTGCGCGGCACCATGGGAA
CCCGTCCTGCAGCCAAGTTTTGGCCGCAGCTCTGGGCGACTGTCGTCAGGAATTTGCTGC
TCAAGAAACGGGATACTAGAAAGACTTTGGCTGAAGTCCTAGTTCCCCTGTATTCGTTGG
GCGTGCTGATCTTCCTGAAGATGCTGGTGCCGAACCCTAACTTCCCTGAAGTGCGGAACC
CAGGCCGTCTTCTGCGCATCCACCACGACGCCTTCCCGGAGAACCATTCCATCGCTGTTG
TAGCGGATTGGATCAACGCCAACGGAACTATGGGTTTCCTAGGAGACATCAACGGAATAC
TCATAGAATCAGATCAGCATCCAATCCACTGGATCCTGTACAACAACACGGAGGATTTGA
ACGACGCCTACCACAGCAACGCCAAGAACTTCCCGATCGCCGTCATATTCCATACAGACC
CCAGCTCGAATAGTGACCCACTTAGATATACAATAAGAACAAATCCGTCTCGAGTTGGGA
CACCTTCCACCCGCAGCCTCACGACGTCTCCAGCTAAATGTCGCGAAAGAACAGGTGTCA
AGGACTGGTCTTCAGACTGGTCTAGAGGTGGTCAACTCATTCCCCTGTCAGAGATGCATA
GAGAGGACACGTGTCCTGTGCTGCAGTATTATTATTCAGGGTTCTTAGCACTGCAGACGC
TGATTGATTATACCAAAATTAAGGCAGACACAAACTTAACATCATCAGAGGTTCCTCCAA
TCCGCGTTGACATCAGACAGTTTCCCAAACGCCAGCACACCGGTGATTGGCTGGTGATAT
TCCGTGTCATCATGCCCATGTATATGGTGATGACGTTGTCACAATTCATCACTTATCTCT
TGATGTTTGTGGTGGGAGAAAAGGAGAAGAAGATCAGGGAGGGAATGAGGATTATGGGAT
TGAAGGACTCTGTTTATTGGGGCTCATGGTTCTTAATTTACGCAGTATTCGTCATGATTC
TTTCATTAGTCAGCACTGTACTGTTATTTACGCTAAAGGTGTTCCAGCATTCATCCTACA
TTCTCATATTCCTACTGATGCTCTTGTTTGGGTTCACCATCATCACCTTCGCGTTTATGC
TCACACCTTTCTTCGATAAAGCCAGGACGGCTGGCATCCTGGCCAGTTTCGCAGTTAACC
TGATGAGCAGTCTCTACTTCATCCAAGTGTTTGTGTCTAACGCTGATTCCCTCGCCTTCT
GGTTCGTCTCGCTCATCAGTTCCAGTTGCTACGCTCTCGCTATGGACAAGGCTCTGGTTT
TGGACATGGCTGGGGTGGGAGTGACGTGGGATAATCTGTGGTCTGGTCCAGGAGTACCTT
TCGGTGGGAGTCTCATCATGATGGCGGTCGACACAGTCTTGTACGGTTTGGCTGCGTATT
GGCTCGATGCTGTCATACCTAGCGAATATGGCATCAAGCAGAAGCCCTGGTTCTGTTTAA
TGCCATCGTTCTGGCTCGGTAGTCGACGAGGACGAGTGTCCGCTGTACATTTCCATTCCA
ACGGAGACGCGGCTCATAACAAGGATATTGAACCAGTACCTAGAGAGCTTCAAGACAAAG
AAGCAATCAGGATCGTAGGCCTACAGAAGAGTTTCCGACACTGTCGCCGTCCTGAAGTGA
AAGCTATAGATGGCATCGACTTGAGCATCTACGAGGGACAGATCACAGCCGTGCTTGGAC
ACAATGGAGCCGGGAAGTCAACACTTTTCAACATTCTGACTGGACTTACTGCCCCTACTG
CGGGCACTGCTTATGTTTATGGACTTGATGTTAGGGATCCAAACGACATGTACGAGATTC
GTCAGATGATAGGCGTGTGTCCCCAACAAGATGTCCTTTTCGATCTTTTGTCTGTGAAAG
AGCATCTACAATTCTTTGCAGCTGTCAAGGGTATACCTCGTAAAAGAATTCAAGAGGAGA
TTCAGAAGGCGTTAGCTGAAGTAGGTCTGTTAGAACAATCTGGTGTCTTCGCCAAACATC
TATCTGGAGGACAAAAGAGGAAACTCAGTATATCCATAGCTTTCATTGGAGACCCTAAGA
TAATAATCCTGGATGAGCCAACGGCGGGAGTAGATCCTGTTTCACGAAGACAAACATGGC
GGATTCTTCAACGAGCAAGAAGGGGCCGGGTGCTTCTATTAACTACACATTTCATGGATG
AAGCTGATATACTTGGGGATAGAAAAGCGGTGATCAGTAAGGGGAAGGTACGCTGCGCAG
GTACTTCATTGTTCCTGAAAAACAAATTCGGTATCGGATACCATCTAACTCTAGTACTGG
ACGGTGTATGTCGCGAGCACCAGATCACGCGCCTGGTGCGCGGTCACGTGCCGCGCGCGG
AGAAGGCGCGTCGTCACGGTCGCGAGCTCTCCTACATTCTGCCGCACTACGCCGTGCATC
TCTTCCCGCCGCTCTTCCAGGCCATCGAGCACGAGATCAAGGAGAAGACTAACAGGCTGG
GTATAACTAGTTACGGTGTGTCAATGACGACTCTAGAAGAAGTGTTCCTAAGTTTAGAAG
GTGAAAACGCTGAGGAAACAGAAGCAGTCGAAGGAGTGTCATCTGTCAAGTTAGTCAGAG
CCAGAGCTTTGTCCAGAAGTCTGTCACTTCAGAGCAAGACGTTGAGTTATCAGGAGCTAA
ATGACAAGGATCCTCAGAAGACACCAGTATCTCTTCCCACACCTCCGGCGTCACACGCTC
TACATTCCACTACTCATGGTGTCGAGCATGTTAAGGTAACTCCTGAAGCACCGATCTCAG
TGGACGCTTTGGGAGAACTTGTGAAGACTCGACCTTCATGTTGGAGAACGTTCTGCGCAT
TGGTCTACATCAGAACAGTGAGAATGATCAGGGACCCATACAAGTTGTATGTCATGATCT
TCTTGCCTATCATATCATGCGCTCTCGGTCTATACATGAAATCTCGTCAAATAGTTTTCT
TCAGAATGCAGCCTCTCACACTAGATCCTGATGCTTATTTCAACAAGACCCCAATAGGCC
TGCACAGCGAACAAAGTATATTAAAAGAAGATTTCAGAGATTCCTTAGAAATCTTAGGAG
CTCATCCAATAGTGGATTTTGATGGGAACTTCTCAAGTCTGTTGGACATGGAGAACTTTG
GAGCGTTCAGTTTGAAGGAGAGCTCGAATTTATACGGGAATGTGATGGCCTATTACAACA
CGACTTACACGCACAGTTTACCGATTATCATCAATTTGTTGGATAATAGTCTTTACAGGG
CCCTAATGTCAGCATCAGGCCTAGAGCAACAATTCAAGCCAATAGAGGTGATGACGCATC
CCTTCCAGCAAACAGAACAACAGGAAGAGTTCAACTTGGGAAACGTTATCTGTGCTGTTT
TCGTCGGAATGATCTTCGCTTTGGTTCCTGTCACACTCGCTGTGGACATCGTGTATGATC
GAGAGATCAAAGCAAAGAACCAGCTTCGTGTGAACGGTCTATCGATGAGCATGTATTTCC
TGACTTACTTCACTATTCTTATCATCATTATGTTCATCACCAGCGTCGGAGTTTTGATTC
TGGTAATCCTAAACGACATTCCAAGTCTGACCAACGGTTCAGCCATCACGATGCTCTGCG
GTCTCCTCCTCCTCTACAGCCCATCAGCGATTCTCTTTAATACCTGCCTCTCCTATATAT
TCGACAAGATGGACTCTGCTCAGAGCATTATGCCGAATATTACTACTTGGGTCGGAGTTA
TACCATTTATACTTGTAGCTGTACTTGATACTTTTAAATGGGGTAGTGATATCGCTTTCT
ATCTACACTTGGTGTTTAGTTTCCTGGACGTTATGTATATACCTTATGCTATCATTTATT
ACGTGGATAGAGTATATGTGACGTGCAACCTACGTGGTCTGTGCACGACGCCATCTTTAG
GGAGTTACTTCACGGCGGAGGTGTGGGTGCTGATAGCGGCCATGTTGTTGCACGTGCCTA
TATGTGGGGCCGCTCTGTTGGCCGCCGATAAACTGAAGACTGGAGGGATTGCTGCTTTTA
GAAGTCGTAAGCGATCAGACAGGGCGGGTAGTGTGAGTACTGCTGCGGGGAATGAGGAAG
CCGCATGTGGAGGGGAGGGGCTGGAAGATGTGGACGTGAGGAGGGAAAGAAGACGTGTGG
CCAATATACTAGCCACAAATCAGGCCAACATGCCGCCGTTACTTGTACATAATCTACGCA
AAGAGTACAAGGTCCGCGGCACAGAGGATGCAGGTGGTTGTTTCGGAGACAGCAAGAGTT
CTACTCGACGAGCTCGCAAGACGGGGCTGGCGAGGCTCAGCCTGGCGGTGGAAGGGGGCG
AAGTCTTTGGATTGTTGGGACATAATGGAGCGGGGAAAACTACTACGATGAAGATCATTA
CTGCTGAGGAGAGGCCTACTTGTGGCACGGTAATGCTCGGCAGTCAAGACATCAGGGATT
CCCAGTCGTCTGCGTTCCGTATGCTCGGCTACTGTCCGCAACACGACGCGCTCTGGAAGA
ACGTCACCATACGGGAACATCTCGAGTGCTATGCTGCGATACGAGGCGTCAGCAATACTG
ATATACCACGGATCGTAGACGCGTACCTCAACGGTCTTCAAATAGCGGAGCACTCCGGTA
AGAACGCGGAGGAGTGTTCGGGCGGTACTCGTCGCAAGCTCTCGTTCGCTCTGGCGATGG
TCGGCGCGCCCCGCGTGGTGCTGCTCGACGAGCCCTCCACCGGCATGGACCCGAGGAGCA
AACGGTTCCTGTGGGACACTATTCTTGCTAGTTTCCAGGGCAAGAAGGGTGCTATACTAA
CTACACATTCCATGGAAGAGGCTGATGCATTATGTTCTAGAGTCGGTATTATGGTTAAGG
GAAGTTTGAGGTGTATAGGATCAACGCAACATTTAAAGAATCTATATGGAGCAGGGTATA
CACTGGAGATGAAGATTGGACAGAGTAATCAAAAATCAACGATGATGGACGGTGACATTT
CAATGTCGCCATCACCTCTGCGATCAACGAACAACTCTCCTTCACTCGGCGAAGCTGATG
AAGGTGGGTCAGTGACGTGTAGTGCGGAAGGTGAGACGGAAGCAGTAGATGCATCGATAC
ACACTCCACTCGTCGCTGGCACACCACCGCTACTCAGGCATCGACATCAAAGGACGGAAT
CTAGTGGTGGGGCAAGTGCAGAAGCCGCCATAGCACTGGTGGGACAGTTGTTCCCTTCAG
CAGTGCTGGAAGAAAGTTTCGCAGAGAGATTGGTCTTCTCCGTACCGCAATCAGCCGTCT
CGAGTCTCGCGAGATGTTTTCAACAGATTGAAGATGCTAAAGAAAAACTGAACATAGTTG
AGTACAGTTTCAGTCAGACAACTCTCGAACAGGTGTTCCTAAAGTTTGCACAATCGGAAA
ACGTGGAGTCTTTAGACCAAGATCAATAGCATTTGCTGATTTTCGTCCAATATTTGGGCA
TATTGCTGCACTTTTCATTTGGATACATGTTTGTCATAAAAAGTTGGCCAAACATTTGGT
CCATACTATTTATAATGTTAATCTTATTACACGCTGTTCGTTAGTTTAAATTTTTAGTTC
TTAATTTGGTCGGTAGATATCGCTACTTCAAGTTGTTACATAGTTCAAATAAATACCAGT
GTTGAAGTTTGGATATTTTACCATTAAATCTGATTTAAATGAAAAGTGCAGTACTGATAT
ACGTGCTTTATAAAGATGTAAGATAATCAAATCAATTGCTTTTATTATTGAACGTTTAGT
TTGTTTGATTTAGCTTTATAATACGTACATGCGAGAATAATGACAGAAAATAAATTGAGA
TAGATCGTGGCTCGTGTGCTTTTGTAAAAGAATGACAATAATGCGGATTCGTAGTCTTAT
TTTTGTAATGAACAATGAAAAGATTCCTGATATTTCACATTAAAGTGATTCTGAGAAAAT
TTGTTAAGAAATAAATTACATACATTCAAACAAATATCCAATCAAAAATGTATAAGGAAA
CTGATGCTCATCTTGCATAGTTTTGAAAGACATTGTTACATATAACTATAACACACGCTC
GTTAGCGAAAGGAGGCCAGACGGAAAAAATTCTTAGACGGAAAAGTTGTCACGACACCTT
TTTAGTTGTCATGACACTTTTTTTGTTTTAGATGATTATCGCTAGATGGCGCTGTGATCC
AAATCTTTTAAAACACGTTCGCGCGTTACGAAAGGAAATGATTTTTATGAGATACGTTTT
AATCGAAAGGAACTTCGTTCCACCCGAGTGTCCCTTGACACCTCTCAAGT
(6590 bp)

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