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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19659c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_40-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:0.64 TPM:0.62
ORF EntryO_TrvaFAMAMG23319_complete:A_TrvaFAMAMG_TR19659c0_g2_i1
Sequence
(Nucleotide)
GTTTAAATGAAGTTAATTTCGAAAGAGCCAAAATTAAATTACTACAACATTACAACATTT
GCATATCAGAAGAGCAAGAGAATATTTAAGTGAATCAACAGAAAAATCCGACATAAGTTC
TTTCGAATATAAACATTATTTAAACAGATAAAAACATCACCAAAGTGTAATAATTTAGTA
TGTCGAACACTTTAATGATCAGGCATTTGCCGACTGCTTTAACTTTCGAAGACAAGGAGC
AACTTTTAAAACACTTTGGCGCCGAATTAGTTTGGGAAACGTCCAAAAAACGCAACTACG
TTTTCGCGTCTTTTGAATCAGAAGAACGGGCCAAGGAGTCTTTACTGCGGCTTCATCAAC
TTGAAATAGGAGGGAGACGGTTAGTTGTGGAATATTCACATGAGAAAACATCGGAGCCTG
TCGTCAATAAAGATAAAAATGAATCGTCAGCAACACAAATGATAAAACGATTCTTGCGGA
ACCTCAATGCTTGGAATCCATCTTTAGATCTGTACCAACCGCCTTCACCACACCTGAAGT
ACAAATACCCTGATGTGAATCCAGTTGTGGCCATAAACATAGTTCATATGCTGTTTACCT
ACAAACCTTTCTACGTTCAAGTGTTACATCTCATGAACAAGATGGGTCTGACCACCCCAT
TTGATTCAAATGAAGTAGCACTTAAATTATTCAAAGAAATTTTTCAAAAATACTTATCAG
AAACAGTTGGTCCTGTCTACATAAGTGACTCTGAATCAGAGTTGTCTAACGATGAATTGC
TGGATGCTGAACAAAGACCTAATTTCCCTGTAATTGTAAGGAGAAAACACAAGCTACCGA
AACCTTCACGTAAAATACCAGCAACTCTGCCGCCTGAATCTAAAATGAGAAAAATTCCAG
TGGACCAAACTGAAGTGTTTGATCTGACAACTGTAGCAGAGCAAAGGAAAATAAGTGTTA
TTGTATCCCAAGATGTACTTCACAAAACAACAGAGGAACCGGAAGTTATTGGAGAACTTG
GAAAATACGGAAAAGAGGCACAATTATCACCAGAAACTGAAGAGGACTCGACTGCACCAG
AACAACCAACAATCACTAGAAGAGAACTACTAAAGAACAGAATATCATCACATGACATGA
AAATCATGTCGGTATACAGAAACTACCATCCAGGTCAACCATCAATGAGGTTGTACATTA
AAAACTTGGCTAAAGGAGTCACCAGCCAAGATGTAGAGAGGATATACCGGTTGTATGTAG
GGCATCTTCCTAAAGATGAGTGCCAAGGGTTCGATGTGAGAGTGATGCAGGAAGGACGAA
TGAAGGGACAGGGTTTTGTCACATTCCCATCACAGAGGATTGCAGAAAAAGCACTGAATG
AAACTAATGGATATTTATTGAAAGATAGGCCAATGGTAGTGCAGTTTGCCAGGGCAGCAA
ATAAACCAACTATAGATTAAACTAGGTAGGGATGTTGAGAATGTCGGTTTTTGGACATTA
ACGAATGCAAATATTCAATGTTGCCCGTGTTGGGTATATTTTTTTTGCGTTTTGACTCGT
CATAACTTCTCAACGAAAAATCCCATTGGAATAAAACAAAAAGTGATTTACTTCTACAT
(1619 bp)

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