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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19659c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_40-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:1.36 TPM:1.33
ORF EntryO_TrvaFAMAMG23318_complete:A_TrvaFAMAMG_TR19659c0_g1_i1
Sequence
(Nucleotide)
GAAAGAGCCAAAATTAATTACTACAACATTACAACATTTGCATATCAGAAGAGCAAGAGA
ATATTTAAGTGAATCAACAGAAAAATCCGACATAAGTTCTTTCGAATATAAACATTATTT
AAACAGATAAAAACATCACCAAAGTGTAATAATTTAGTATGTCGAACACTTTAATGATCA
GGCATTTGCCGACTGCTTTAACTTTCGAAGACAAGGAGCAACTTTTAAAACACTTTGGCG
CCGAATTAGTTTGGGAAACGTCCAAAAAACGCAACTACGTTTTCGCGTCTTTTGAATCAG
AAGAACGGGCCAAGGAGTCTTTACTGCGGCTTCATCAACTTGAAATAGGAGGGAGACGGT
TAGTTGTGGAATATTCACATGAGAAAACATCGGAGCCTGTCGTCAATAAAGATAAAAATG
AATCGTCAGCAACACAAATGATAAAACGATTCTTGCGGAACCTCAATGCTTGGAATCCAT
CTTTAGATCTGTACCAACCGCCTTCACCACACCTGAAGTACAAATACCCTGATGTGAATC
CAGTTGTGGCCATAAACATAGTTCATATGCTGTTTACCTACAAACCTTTCTACGTTCAAG
TGTTACATCTCATGAACAAGATGGGTCTGACCACCCCATTTGATTCAAATGAAGTAGCAC
TTAAATTATTCAAAGAAATTTTTCAAAAATACTTATCAGAAACAGTTGGTCCTGTCTACA
TAAGTGACTCTGAATCAGAGTTGTCTAACGATGAATTGCTGGATGCTGAACAAAGACCTA
ATTTCCCTGTAATTGTAAGGAGAAAACACAAGCTACCGAAACCTTCACGTAAAATACCAG
CAACTCTGCCGCCTGAATCTAAAATGAGAAAAATTCCAGTGGACCAAACTGAAGTGTTTG
ATCTGACAACTGTAGCAGAGCAAAGGAAAATAAGTGTTATTGTATCCCAAGATGTACTTC
ACAAAACAACAGAGGAACCGGAAGTTATTGGAGAACTTGGAAAATACGGAAAAGAGGCAC
AATTATCACCAGAAACTGAAGAGGACTCGACTGCACCAGAACAACCAACAATCACTAGAA
GAGAACTACTAAAGAACAGAATATCATCACATGACATGAAAATCATGTCGGTATACAGAA
ACTACCATCCAGGTCAACCATCAATGAGGTTGTACATTAAAAACTTGGCTAAAGGAGTCA
CCAGCCAAGATGTAGAGAGGATATACCGGTTGTATGTAGGGCATCTTCCTAAAGATGAGT
GCCAAGGGTTCGATGTGAGAGTGATGCAGGAAGGACGAATGAAGGGACAGGGTTTTGTCA
CATTCCCATCACAGAGGATTGCAGAAAAAGCACTGAATGAAACTAATGGATATTTATTGA
AAGATAGGCCAATGGTAGTGCAGTTTGCCAGGGCAGCAAATAAACCAACTATAGATTAAA
CTAGGTAGGGATGTTGAGAATGTCGGTTTTTGGACATTAACGAATGCAAATATTCAATGT
TGCCCGTGTTGGGTATATTTTTTTTGCGTTTTGACTCGTCATAACTTCTCAACGAAAAAT
CCCATTGGAATAAAACAAAAAGTGATTTACTTCTACAT
(1598 bp)

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