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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR1962c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_04775_[Danaus_plexippus]
Ontology
GO:0000339 F RNA cap binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0051028 P mRNA transport
Transcript
Level		FPKM:7.63 TPM:7.47
ORF EntryO_TrvaFAMAMG1131_complete:A_TrvaFAMAMG_TR1962c0_g1_i1
Sequence
(Nucleotide)
GCGAACTATTGCTAGCGTTTTTTCGTTTTGATCGTAAACGGTGCATTAAAGTTAATCAAT
ATTTGTGATAATCATTATAGTGACTCTTTAACTATGAACCGAAGAAGAGGTCACGACGAT
GAAGAGGGATATGAGCGTCTCCATCGGAAAAGGCGTCGTGTCTCGGAGAATCAAGAGATT
GAAGATCGATTAGAGTCCTTAATTCTAAGAGTTGGTGAAAAAAGCAGTTCTAGTTTGGAA
AGCAACCTCGAAGGACTGGCGAGCGTACTAGAAGCCGACCTGAGCACTTTCAGAGTTAAA
ATATTACGTATTCTAACAGACTGTGCGATTCGTATGCCCGAGAAATGTACAATATATGCA
ACTCTTGTTGGTTTGTTGAACGCAAAGAATTATAACTTTGGTGGAGAATTTGTAGACTAC
ATTGTTAAAACATTCAAAGAGAACCTTAAAGTGGGGAAATGGAATGCTGCCAGATACTGC
TTAAGGTTCATAGCCGATTTAGTTAATTGCCACGTCCTGGCTGCTTCATCACTGTTAACA
TTATTAGAGACTTTAGTTGATTCTGCAAATGAAGATAGCGTACCAAATGTTAGGAGAGAT
TGGTTTGTGTTTGCGGTGCTATCCACATTACCGTGGGTGGGTAGAGAGCTTTACGAAAAG
AAAGAATCTCAATTAGACCATCTACTTGTAACTATCGAAGTTTTTTTAAACAAACGGAGT
AAGAAACATTGGCCAGCTCTAAAAGTGTGGTCTGCTGACTCACCACATCTTCAAGAAGAG
TATTTGGATTGTCTATGGTCACAAATAAAGAAATTAAAGCAAGATAATTGGTCAGAGAAG
CACATACCGAGGCCTTACCTTGCTTTTGATTCCATTTTGTGTGAAGCTTTACAACACACT
TTGCCTGCTATTCAGCCACCACCACACAATGACACTGATAAATATCCGATGCCAAGAGTT
ATCTTCAGGATGTTTGACTACACCGACTGTCCAGATGGTCCTGTCTTGCCAGGAGTCCAT
TCCATAGAAAGATTCCTGATTGAAGAACATTTACACAACATCGTAGAGTCATACCACTTG
GAACGTAAAGAATGTGCAGCTCAATTACTCTGTTTCCCTTACAAAGCTAAAATTCCTTTG
GAATATTGTATTGTGGAAATTATATTTGCCGAGTTATTTAATTTACCGAAGCCACGGTAT
TTGGAGATCTGTTACGGTTCGATATTGATTGAGTTGTGTAAGCTTCAGCCTTCGACGATG
CCACAAGTCTTGGCTCAGGCTACAGAGATATTGTTTATGAGGATTGATACAATGAATGTT
GCTTGCTTTGATAGATTTGCAAATTGGTTTGCGTACCATTTGAGCAACTTTCAGTACAGA
TGGTCATGGGAAGATTGGGAAGGTTGTCTCCAGCTAGACCCTGAACATCCAAAACCAAGA
TTCATCAGAGAAGTACTTGGAAAATGTTTAAGGTTATCATATCACCAAAGAATAAAAGAC
ATGGTGCCAGAGACTTTTTCAACTTTCGTTCCGCTGAAACCTGAACCAATCTACAAGTAT
TCCATGGAAGGAGCAGCTTCACTCCCAGGCACCGAAACGGCCCATCAGCTCGTTATATTC
GTCCGTAACAAGTGCACCCCCGAAGAAGCCCTTAACGTCCTACGCGACCTCCCCAACCCC
CTTAAAGAAGGGGAGCAACCGGCCAACCAACCCACCGCGTACAACCCTCTCAAGATTGAC
GTGTTCGTTCAGACCCTATTGAACTTGGGCAGTAAAAGTATCTCGCACAGTTTTGCTGCG
ATATCCAAGTTTCATTATGTTTTTAAGATCCTAGCAGAATCAGAAGAGGCTCAGATATGC
GTCCTAAGAAACGTGTGGGAGCTCTGGCAGCGTCACCCTCAGATGGTGTGCGTGCTGGTG
GACAAGATGCTGAAGACTCAGATCGTGGAGTGCAGCGCGGTGGCCACGTGGCTCTTTTCA
AAGGAGATGGCGCCGTTCTTCACGCACGCTTGTCTGTGGGAGATGTTGCATTTAACTATA
GACAAAATGAACAAGCATGTGTCGAAGCTCAGTGGTGAACTACAGGAAGCCCGGGAAGCA
TTAGCTAGGGCAGACTCAAGCAGTTCAGATTCAGAAGACGAAACCAATAAGAAGAAAAAA
GATCAAGACAAACCAACTGAAGAGGCCGTAGAGCGCATGGAGGAGCGCCTGGAAGCCGCT
CACATGGACCAGAAGCGTCTGTTCCTGATCGTGTTCCAGCGGTTCATCATGATCCTGTCG
GAGCACCTCGTGCGCTGCGACACGGACGCGCGCGACCCGCACACGCACTGGTACCGCGCC
ACGCTGCACAGACTCACGCAAGTGTTCCTCATTCATCACGAGCAAGTCCAGAAGTACAGC
AGTACACTGGAAACGTTGCTGTTCACACAAGATCTCGATCCTCACATCTTAGACGTGTTC
CATCAGTTTGTTGCGCTCACTGCGTGAAACATTCGCCATGACACGAATACAAGACTGTGC
CTCGAATGGCTCGGGCACATTAGCGGGCTACAGCGAATATTTGTATTAAGATGAGCGTGT
TAGTAGGCTGCAAATATATGCTATATGTCATGATTTTTTTTGTAAAAATGTGACAAATTA
AATTTAGATATGGCCTACCAAAGTGTGCGTAAATTTAGTTCACATAAAATGTAGAAGAAC
GGTTACAAATTGTCGATAAATTGCATTGTGATCTGATAGTGTTCCATTGATGCGATGAAT
ATGGCCTCATTAAAAGTCTCAACATTAGTCAAATTGAAAAAAATATGCAGACGCAAACCT
TCTTTGAAGATTTCTGTACTGTTTTATTTCGTCTCTGCCCGTTCAAGATCTTTTAGCATA
CACGAATACTTGCCCGCTAATGTAGTCATGCTATAACTTGAAATATAAATTGAGCTGTTT
AATTAACCCTTAAATGCATGGTTTTTTATTGCGGCCTGGAAAAAATGTTTCCTG
(2994 bp)

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