SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19519c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_factor_2B_[Danaus_plexippus]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0018095 P protein polyglutamylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0060271 P cilium assembly
GO:0060296 P regulation of cilium beat frequency involved in ciliary motility
GO:0070062 C extracellular exosome
GO:2000147 P positive regulation of cell motility
GO:2000253 P positive regulation of feeding behavior
Transcript
Level		FPKM:6.20 TPM:6.07
ORF EntryO_TrvaFAMAMG23199_complete:A_TrvaFAMAMG_TR19519c0_g1_i1
Sequence
(Nucleotide)
GCGTTGTTAATCACTTTATAAATCATAGGCAGCAAACCTTTGCAAATTTGGGACAAAAAA
AGTTAGAAATGGGCACATAAAACGGATTACCGACAATGATATCCAAAGCCTGGTGCTGGA
GATCGTAGGGACCAATGTCAGCACCACCTACATAACATGCCCGGCTGACCCCAAGAAGAC
TCTCGGAATCAAGCTACCGTTTTTGGTTATGATCATTAAAAATTTAAAAAAGTATTTTAC
TTTTGAAGTACAGGTCCTAGATGATAAGAATGTACGTAGAAGATTCAGAGCCAGCAACTA
CCAGTCAACGACAAGGGTGAAACCGTTCATCTGCACAATGCCTATGAGACTGGACGAAGG
CTGGAACCAAATACAGTTCAACCTAGCAGACTTTACACGGAGAGCTTACGGGACCAACTA
TGTAGAGACATTGAGAGTTCAGATCCACGCTAACTGCAGAATAAGGAGAGTTTACTTCTC
AGATAGACTGTATTCAGAAGATGAGCTTCCCGCTGAGTTCAAGTTATTCCTCCCGATACA
GAATAAAGCCAAAGCAGCAGTAGCAACTTAAAATTATAAGTCAATTTTGGAGTAGACATA
TTTTTTAAGTTTTATTTTAGTTGATGTTTCAATCCTCTGTTTTAATGTTTGGAAGTGATG
TTTTCCACATTTTATAAAAAAGTGCACTTAATAAACACTTTATGCATTTACTCAAAAAAA
A
(721 bp)

- SilkBase 1999-2023 -