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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19468c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_B_polypeptide_1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0070449 C elongin complex
Transcript
Level		FPKM:30.74 TPM:30.11
ORF EntryO_TrvaFAMAMG23185_complete:A_TrvaFAMAMG_TR19468c0_g1_i1
Sequence
(Nucleotide)
TAAAAATTGATCAATATTGAGTATCTGAAAATAATTTACTTGCTACTGAAAGAGAAGATT
AATTTAGTAACTTTACAAAAATAGAATTATCAACAACTCAAAACTTCCATCTGCAAAACT
AATCTCAACACAGCAAAGATGTCTGAGCCATCTGCAGCCAATGTAGCCGATGAACACTCT
GCCAGCGGATCTGGTAGCATCGGTGAGGAGAAAGTCTACGGAGGATGTGAAGGTCCAGAC
GCTATGTACGTAAAGCTGGTGTCATCAGACGGCCATGAATTTATAGTCAAGCGAGAACAT
GCTCTGATCTCCGGAACTATTAAGGCAATGCTGAGCGGTCCAGGACAGTTCGCTGAGAAT
GAAGCTAACGAAGTCAACTTTAGGGAAATACCGTCACACGTCTTGCAAAAGGTCTGCATG
TACTTCACATACAAAGTACGCTACACTAATTCGTCTACAGAAATCCCCGAGTTTCCGATC
GCTCCAGAAATCGCTCTCGAAGTACTGATGGCCGCTAATTTCCTTGACTGTTAAGTGATA
CTAACTTTGTGTACAAGGAATCAATATTATGAACAAAAAAAGTGAAGTCGTCACAGTCTA
ACGTTCAGAATATCGTGTAGTTAAGCGCCATTGGCGTACTTTCAATTGGCTTCATTCTGT
TGTTCATGATGTTGAATCCAGATGTAATAATGCTATGGTACAATGAGAGATAATTATTAT
AAAATATCAGAAACTGCTGACAATTCGTTATAAAATAATTTAAAGCGTTTAAAGTACTGT
TTCTCTCATTGTATTGTTTTTTTCTTGCTATAATTAACTGTACATCAAGAAGGTGGATTA
CAAGTTCAAATAATCTGACAATTTTGTAGTTCTAAGACCAATAATGGTGTATGTCTATGG
AGGATGTTGGACTTCAATAGTTGAGGTTTTAGAGTGCATATTATTATGTATTTTGTTAAT
TTTAATCTTTTTTTCAAACTGCTTCAAGTTAGCAAAATGGCAAAAATTCAAAACCATCAG
TTTATAAGTTATTTTCCAGTTAAGTTTTTCCCAAGTTGAACATTGTCAACACTTCCCTGG
ATTCATTGAAAAGTTTTATGTATCATCAATTAAAACCTTGATAGTAAAAGCAATTATCAA
ACTTTCTAATACATTGTTTGTATTTTATAGTATTTCTTAAGTATTTTTTACAAGTTAGAC
CTTTTAGAAATTCTTACTTTTCCTTAATATATGAAAAAGTAGAGGATCGATAATATCTAT
TGAAACTTAAGAATATGGTTTTTTTTTTAACGTTGGCAACACTAAACATCTTTTGGATCA
AATAAGGGCAATGTCATTCTGGTTTCCATTAAATTTTACTTCTTAGTTAAATTTACGTCC
TATGTATTTACGTAAGAAAACTGGACAGTAAAGTTGGTCTTAAAATTCTTATGTATTGTA
ACCAATATCCTTAAAAACTGTAGCAATAGGTTAAAATAATGCTCCTTATTTTTTATAGTT
TCGAAGTTAATTGCTAGTTATGTACCTACAAAATTTCATAGATTTTAGTATTTATTTTAC
GGCTCACGCATTAACATTTTTTTGTACCAAAAACTGAAGTACGGCTTTGTATTTTGTTTA
AATAAATTATAATACTTTGTAAAAAAA
(1647 bp)

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