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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR1944c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_kelch-like_protein_5_[Amyelois_transitella]
Ontology
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
Transcript
Level		FPKM:1.72 TPM:1.69
ORF EntryO_TrvaFAMAMG1108_complete:A_TrvaFAMAMG_TR1944c0_g1_i1
Sequence
(Nucleotide)
GACTGTCTTTTGTAGTGCAAGTGCTTTGTGCTCAAAACAAAATCAAACAGAATACAAACA
CTGTGCTTTTTGTTGAGTTAATTGGAAAGCGACATTTGAATTTAATTCTTTTTCAATTAC
AGTAATTGAATACAAAAAATTTGATCTTACATCGTGATTACATAGAGAACTTTATACGCT
ACTAAATAAAACAGAATTCTTTATCTCAAAGGAGTGAAAAGTTTAACAAAAATGTCTGGA
TGTGAAGCTCACAAATCCGAAACTGCAAAAGACAATATTTCCACTAATTCCGTCGATGAA
GGCTTACCTCGAGAACTCAGTCAGTTAAGTCTATCAAGTGCTTCAAGCCAGGATGAGTTA
TTTTGTGACAAAGGACACGCCGAAGCCGCCTTGAAGAATATCTGCGGTTATTACCAATCT
CAAAAATTGTGCGATGTAATTTTAATAGCAAGTGGTTGTAGGATTCCAGCACACAAGGTA
TTGTTAGCATCATGCAGTGAGTACTTTGCGGCAATGTTCACTGGTTCACTGCGAGAGTCT
CAGTTGACTGAAATAACACTTGAGCGCATTGACTCACAGGCACTACAAGCTCTTGTTCAC
TACTGCTACACTGGCACAATAGAGCTAAGGGAAGAAACAGTTGAAGTTCTGTTATCAACA
TCAAGCTTGCTGCAACTGCATTCAGTAACAAATGCATGCTGTGCTTATCTGAAGAAACAG
TTAGATCCTTGTAATTGTCTGGGAATAGCTCTGTTTGCTGAACAACAATCATGCATGGAT
TTAAACAAAACTGCATTGAAATATACATATCAAAATTTTATGCAGGTTGTTAAGCATCCA
GAGTTTCTAGGATTGCAGTCAGATCAGTTATCAAGTCTTCTGAAATCTGATGATCTGAAT
GTTGTTACTGAAGAAAATGTCTTTGAAAGCCTTATGACATGGGTTCAACATGACTGTGCT
AATAGAGAAAAGTACCTTCCAGCACTACTTAAATTGATAAAGTTACCATTGCTTTCATCT
GAGTATCTTATAGATAAAGTTGAACTAGCATGCGGCAATGTACCAGAGTGTCAACCTTTG
ATCATGGAAGCAGTCAAGTGGCATCTACTGCCAGAGCGACGGTCATTACTCTTCTCACAC
AGAACCAGACCTAGGACATCTACTATTGGACGTCTCTTGGCTATTGGGGGCATGGATGGC
TATAAAGGTGCCAATAATATGGAAATGTATGACCCTCGCACTAACACATGGACTCCTTTC
ATGAAAATTGGTGCCAGAAGGCTACAGTTTGGTGTTGCAGTCATGCAGAACAAACTAATT
GTTGTAGGTGGCAGAGATGGACTGAAAACTTTAAACACTGTTGAATGTTTTGATCTAACA
TCTCTGAGTTGGAGTACTTTAGCTCCGATGAACACTCACAGACATGGCCTGGGCGTGGCG
GTGCTGGGCGAGGGACCCAACGCTCCGGTCTATGCAGTCGGCGGACATGACGGATGGATT
TATTTAAATTCTGTAGAAAGATGGGACGCGTGTTCCCGCACGTGGACGCTGGTGGCCCCG
ATGAGCGGCGCGCGCAGCACGTGCGGCGTGGCGGCCCTGCGCGGCAGACTGTACGCGGCG
GGCGGGCGCGACGGCTGCGCGTGTCTGCGCTCGCTCGAGTGCTACGACCCCGCCACCAAC
CACTGGACCAACTGCGCGCCCATGAACAAACGACGAGGCGGACTTAGCGTGTGTGCGGCC
GGTGGCTACCTGTACGCGCTAGGAGGTCACGAAGCGCCCGCCAACACTGTGGGCGGTCGG
CTGGCCTGCGTGGAGCGCTACGACCCGGTGGCGGACACGTGGGTGCTGCTGGCGAGGCTG
GCCTACGGAAGAGACGCTATCGGCTCCTGTCTACTTGGAGATCGTATCGTTGCTGTCGGT
GGATACGATGGTGTTCAGTATCTGTGTGTCGTCGAAGTATACGACTCGGAATCGAACTGT
TGGCGGAAACTGGCGCCCCTGAGTTCGGGGCGAGCCGGCGCCGCCGTGGTGGCCGTGCCG
CCGCCGAGAAACCTGTTCTGATACAACGACAACCAGTTGACGACCTATGTGCTCGCGTCT
TCACGTGACCGCCCTTCGTCGCCGGCCTGTTTGCCAGAAGACGGTGTTTTGCCTTCCTAG
ATGTTTGTACTGATCTAGTGAAGTGGGACATTTGCTGGATAAATTAATTCAAGGTTGACT
CGTATAATATCAGACAAACCGAAAACATTGTTAAAATGGTCCGAAGTGGTTCAATTTAAC
TATACATATTTTTTGAAGTATAGATACCAAGTCGAAGCAAGGAGGAAATTGAACGAACTT
GTGAACCCACAATGTATTTCGGAAAAAAAAAATATCTCGACAACTTCTTTTGGGGTTAAA
AGAGACCAAAGAAAAACGATTGTTAGTTTGTTAGGAAAAATTATTAACTTTATGAATTCT
CACATAATACTAATTCTTAATCAACAAAATTATGAAATTGCACAGCTATTGATTGCTTAA
AGCACTCTGAAAAAACATCACTATATTAACGAGTCCCGATTTAAAGAGTGTATCTTATCA
CTCTTAGCTACTTAAAATAGCAAAAAACCATGTTGAAACAACATAATAATACACTATGAA
TAGAATGAATAGAATTCAAAGTATATTTGACCGACTTCTCAAAAGGCGGAGGTACTCAAA
TTGTTTTTTTGTTTCCTCATAACTTTAGTTTCGGTGGACCGTTTTGGATGATTTTTGTTT
TAGATGAGAGGTAATCACCTCGGCGTGCAGTACGTACCTTTTATTTAAAGATCGAACATA
AACTGTTGAATCTGTTTACACACATAGGTATGTCGTTCCATCCAGTGCAAGTAAATATAC
AGGGTGGATCTGTAACTTTGGACAAACTGACTTGGGGTGAATGACCTG
(2928 bp)

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