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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19401c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106100834_[Papilio_polytes]
Ontology
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0019788 F NEDD8 transferase activity
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031466 C Cul5-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0051775 P response to redox state
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
Transcript
Level		FPKM:54.29 TPM:53.20
ORF EntryO_TrvaFAMAMG23100_complete:A_TrvaFAMAMG_TR19401c1_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTAAAAGACCTAGTTTTATTTCATCCATAACTTTCACATTAATTATTTTCCCA
TTCGCTGTATGGACCATTCTTGTTGACAAAGCGGGCATCTATTATTCTGTTTGACCCAGA
GGGACATGCAACAGAAGTGAAAACTGTGGTTGCATTCGCCCCATACCACCACACAATCTT
GCTTCCCGTACGAATCCTTTTTGCTTTCACCCTGACATCGAAGACATGCATCCATAACTT
GGACGCGGCAAATAGCGCAGGTATCACATTCGACATCCCAACTCCACATTGCAACAGCAT
TCCATTTCTTCAGTGTGAACATTTTATCCGACTTCTGTCCGTCATTATCACCCCGATCCA
TAGCATCATAATCTTCACCAGACATTGTTTATGAGACAAATATACTTATTAAGATTAATA
AATAAATAAAGGAGAATTGTTTATTTTTCAACAAACACAACAGCTGAGATTCGCGAATTG
ACACAAATTGACATTTACAATTTTTCTAAACTGTCAGCTGTCATTGCTCTCTGTCAAAGT
CTGACATTTTATTTTTTCAACCTGTCCTTTTTGTTTGCTTTTAAGCAAAAATAATAAACT
TAACAGTCTAATGTGATGAAAGATAAAAGTTATGCTGGTAAAACGTACAAAAACATGTTT
TCTTTGAAACGCGCTTATTGTTGTCTAGCTCATTCATCACCACTTAATCGAGCCTTTATT
ACTCAGGACTGTAGAGAGCAACTGGTCTCGGATATTCACTGTATAGGATGGAAAAGGGAT
ATGACCGACTTACAAGAGCCAAATTCTGTTTGAGGAATTCACAAATTTGCTGTCGATGAG
TACTGGTCTATGATGAATCAACTATAATTGATGTTTTTCTTCACTATTTTCAGCCAGTGG
TTTTGTGATTTCACAGAAGTCAATTACAAATTAACTGACGACCGGCCCACCTAATAGTTA
CGGTCAGGTACCGTGACTCATGGACCCTGCAATTAATGACCTACCTAATAAATACCTACA
TACTTAGGTAAAATGTAGGTAAAACAAAAAAAATGCGTGGTATTGATTTAATTTTATTTG
TAAAAAAACACAGTAAGTACATATTTACTTATGAACTAACTACATAATATTATTATAATA
AACCTGTTTTACAGTTGTATAAAATTATTAAAATAAACCCTGTGCTATAAATTTTACTTC
TGGCTTTTATTACGGGATAGGTACCTACATTGCATCTTTAATTTAAACCACAGCAGATGC
CTTACTCGTTTTAATCAATATTTTATAATATAACATCATTAAGTTATTTCAATCACAGGA
TAGGTAAATAACAAGAAAATTACAAAAATGTACAGAATGTGATATTTAAAACTAAAAGAA
TTAGCGTTGTATTTTAAATATAACCTAGTACTATCGGTAGGAAAGATTAACACTGCTTCA
TAATAATAACTATCTAGAAATTATAAAAGGCAAGATACAATGAAGTGATGATAATAGCAA
GGCTAGCTCCTAGACTAGGTGCACCACTAAAACAACCCAAGTCTTCAATTTGGACTTGAT
ATCTGATGTTGTATGGGAATCTGCACAGCGCAGCATCTGTGCAAATAGCAGTCGATGCAT
CAACACCGCCGGTTTCTGATTGTACTGAAATATACAGTGGTGCACAAGATCCTATTGTCC
AAACGCTGTCACAGGCATTCAGAATTCTAATTTCGACATTTCCGGTCGAAGCCAAATTTT
CACAAGTAATTGCATTGGGTTCCATACCGATAACCGTTGTATTCCGTCTTGGTTGAGGAA
CCACCCTAGAATGGCATATTACAAGACTGCCTATTCCGCTTGCACTTCTACTGATCCTAA
TTCTTCTGTTATCGTTGTGCACATAGAAATAATTGGGACTAACAGTGTAGAAGTTAATGT
AGCCCGGCTCCACGAAGTCATCGAACTGTCTCGTTCCCGACAGTTGATCGACAAACTCAG
AGCCACACAGAGGGTTCACTATTCTTCTTCCAACTGTCTGGATTCTCTCTAAAATAGGAT
TCATAACGAGTGGTATATTTGTGCCAGCTGTCGTCAATGAGATTGATCTGATATCATTGT
GGATATCGCGGACTAAATTCCATATGTTATCAAATTGATTCGTTGCTGTTGCAAAAACTA
GTCTCAAATCTGGAACAGTTTCGTTCAAAAGACGAGCTTGTTCAAAAACTATTTCATTGT
TCTGAAGTTGACCGGTGTTGATCAGATACAGAACAACAGTTGAATTTCCTCCAACGTAAT
TCCGAGAGCTCTCGTGTCGTAATTGTTCTTGCATCATTACTCTAATGTTTGTTAGACTGT
TTTGCAGACTCACACCATTCAGCATTGCTTGATGTGCTGCCAAAGTGTAATTAGAGTGGA
ATTCAACCTGCGAGAAGGTTGTATTAACAACAACACTTCCATCAAAAGCATTGAGCAAAG
TGATACTCGATCCAAACTTGTCTACTTCTATTTCATCCACTAAATATGAGATAGCTGGAT
ATACTGCTTGATACTGCCATGAAGAGTCAAGTACTACGTATAAATTCGCTCTTAATCTGT
AATCATTATTGGTAGCTTCTGATGTTACGCAGCTTAAATCATTTAAGTTGTTTGTGGTGT
ATGTTTGGAAATTGGTAACGGCGCTTGTAACTAGTTGCTCAAGACCTCCCATAATAGTTC
CTCTTAGAGGCATATTGGTATCGAGGGCTGCAGCAAATGCAAAAGTTTCACTAATTAAGT
TTTGATTCACTATTTGTGTTTGGCTCAACTCGCGGCGATTACATGCACGGAATGCTGAAC
TGAATACACCATTCCGGGGAGAATAGTACATGTCCAAAAGTTGAGAAAGCCTTAAGGAGC
TGAAAGTTGACAGGACTGAAGTGATCGAACTGCCGACGACGAAACCATCGATTCCTCCTC
TGATTTCTGGATCTGTCATTTCTACATTAACACGACTGTTAATCATAAAATGTCTGTGTG
CTTGAGTGCTATTCCAGTTACCGGCGGTACCGATGGAAATTGACGCGCTACCTCTTTCAG
TTCCTTGAATAAGAATAGCTTCGGCCAAATCACCTGAAAGTGTTGCTGGAAATATGGAGG
TCACTGTTGCTTGTACATTTTCATAGTTTAAAATAGAGCCTTTAGCGAGTTCAAGTACAG
GGACTTGTTGCGGTTGAGCGCCTGCAGCAATACCAGCTATTAGGTTTCCGCCTGACACTG
CTCCCCATTGTGTAGATACAACTCCGTTTAAAAGGGGACATGTGCTCTCTCCAAGAATTT
GGCGCTCAGATTTACTACTATCGTAGTTTCCGGTGAATTCAACGTCGTTGTTTGGATTGA
ATTGTCGCATCTGGCCATTTTTGTTGTACTTTTCTAATACGGAGGCATCTAGAATTTCCA
CATCATCGTCAATGGATCGAGCTGTTCTAAGAGCTCGGTATTGTGACAGCTGGTTACAGT
TATTTTCATCCCCTCTAACTCTCGCATCAACAGTTGTGGACAACATGTGATGCAAAGTAC
ACTTTAATACTGAATTAACGGTAGTATTTCCCAATGTCTGCAAATTGCTGGGAATCAGTC
TTGTTAGTAGTAGTCTGTGACGATGAAATGAGTGGAAAGTTGGTGCAAACGGTATCACGT
TCGAAGACAATGCTAGATTGGTTTCTGGCTGATGAAATTCTATACCATCCTGACGGTATG
TATGAAGAAGCAACGCCGATAGTTGTCGTAAATCCATATTAACATCAGGGTTGTCTTCGA
TCCTCCGAATGATATCAATCAAAACTGGCATAGTTGTTGGCGGCAAGTTGTTTCTGTTCA
GCAATATGGGGTCAAAATAACATTCTCGTAGTTCCGGAGCGATGCTGGACTGTGCTGTCA
GTTGACTGTGGGCGGTACCCAACACAGTTGCCACTAAGACGACTGGCAGCCAATGCATGA
TGATAAACTATTCGAGATAAACTCTGCACTGGATACGAACACAGACCACTGAGCACATCA
ATCCACAAACTATAACAAAAAGAACACCAAAATTGTCCACAGCAATTGTTTATGAATTAA
AAAACATGCAAGGGCCTCATTTAGTACGGACGCGCCCAGCACATAGTCTACTTGTAAAAT
AAAGGGTGCCAG
(4152 bp)

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