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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19400c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_ankyrin_repeat_subunit_C_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030904 C retromer complex
GO:0031410 C cytoplasmic vesicle
GO:0032439 P endosomal transport
GO:0034058 P endosomal vesicle fusion
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044354 C macropinosome
GO:0046872 F metal ion binding
GO:0048549 P positive regulation of pinocytosis
GO:0070062 C extracellular exosome
GO:0090160 P Golgi to lysosome transport
GO:1901981 F phosphatidylinositol phosphate binding
Transcript
Level		FPKM:10.83 TPM:10.61
ORF EntryO_TrvaFAMAMG23096_complete:A_TrvaFAMAMG_TR19400c0_g2_i1
Sequence
(Nucleotide)
GTTTGTTTCATTGCAGGTAGAAAAATTGTTTTTCTTCTTTCTCTTCAAGGTTTAAGTAAT
ATTTCAGCGGCTTCAAGGTGTTGCAAAAAGTTTCGTCATGGCTTCAAATGAGGTGACGAA
GCTTCAGCAGCATTTGACATTGCTGAAGGAAGAGTACGGTAAACTCCAGAGTCATTGTGC
AGAGGTGGAACGAAAGTATACACTAGCTGCAGCTTCTGCCGGCGACCTCAGCGAAACTAG
TTTTGTCGCCAGACTTTTGATGACCGTTGCTTCCTTGTACGGCAGAGAAACCTATTCAGA
TATTAAGATCAAACTACAGAACAAGTCTATGCCTGGACACAAGTTTGTACTCAATGCTCG
CTCTGACGACTGGAATGAAGAGGCATTAAAAAACTTGGAAGAATTAGATTGGTCATGTCT
ACCAGATGAAGTAGGATCAGCTCTTCTGAAATGGTTGTACACAGACGTTGTTGATTTAAG
TAGAGGAGATTCTTTTGCTCTGCAACTGATGAAATCTGCGGCAAGTTTTAAATTATATGG
TCTGGTGAATAAATGTGAACAAGCACTTATTGCATCTGTTGGTGTTAGGACCTGTGTGAA
ATTTTATTCAGCAGCTGATGAAATCGGAGCCAATGCATTGAAGGAACACTGCTCTGGACT
TATTTCTGCACATTGGGATGATCTAACAGGCGATGACTTTGCGCACATGTCATCGGCACT
TCTTTACCGCATGTTGAAAAGTAAAACTCCGCAACCACTCCACGGCGCCGTCAGACTGAT
GCGAGAAGATGTTGTGTTCCTGTGTCTCGTTGAAAACCACGCTAATTTAACCGATATAGT
GAATGCTATGTCATCAAGAGGAGAGCTGCCACTAGAGCTGGCGTTACGAGGACGAAGTGC
GTCCATAGCCACAACACTACTCCAACACCAGGCCGACCCGGACTCCAGGGGGCCACGTGG
TAGAACTTTATTACATAGGGCCATAGATTCACGGGACGCATTTTCCGCCAAGTTCCTGGT
TGATAACGGCGCTGATCCTAATCTAACAACAAAGGAAGAAGGTGACACAGCATTACATCT
CATCGCTTCTCTAACTTCAAGTTCATGCGATGAAGAAACAATGGAACAAATGACTGCAAT
CGCTGAAACAATGACACAGAAAAACGCTGACATAAACAAACAAAATAGAAAAGGATTCAC
ACCACTACACCAAGCGGTCATAGCGAGAAATCAGAAGATATTCGACATATTACTTAGGCA
GCCAACCTTGGACCCAAATCTACGTACAATAACGGACGAACATCCGCCATTGTATTACGC
GCTCGTTGACGACAGACGAGCGTCGATATCGTCCAGCGAGACTCTGGTTATGAATGGTTC
GAATCCATTCGATACTCCGGTGACGAATAAGAATGCTTTTAGCGAAGACCCGGTCGAAGG
CAAGAGTGAAAGCGTGGTCGAAAGAACTTTTGCAGCCAAGTTACTGGAAAAGGGATGTAT
ACCGAATCCGTTGTATTCTGGATGCGGTGATAGTCTTCTGCATATATTGGCACAAGGATG
GTTTGAGGACTCAGCAGTATTCCTAACATCGCACCTCCATGGCGAGTTGAACCACACTAA
CGAGGCGGGACTCACGGCCCTGCACGCCGCCTGCGCTAACGGACTCGCCCGCCTCACCAC
CGCGCTGCTCGAGCACGCCGCGCGACCCAACGTGCAGACCATATACGGAGAACAGGACGA
TACTGTTTACAGACAAACTCCACTTCATCTAGCAGTATTGAATAACCACGAGGGCGCGGT
TCTAGCGATCATAGAACACAAAAAGTTGATAGAAAAAGGAGATTATCCATCGACAGACCG
AAGCAACGTCACCTTAGTGCCTAATCTCAACTTGAAGAACTCTGAGGGCGACACTCCTGT
TAGTCTAGCTCTGTCTGAAGGTCACAAGAACCTAGTGGCCCCGCTGGTCGAAGGCGGCGC
CGACCTGAACGTTCGGAACGGGAAGGGGTTCACGTTGCTGCACCAGGCCATCGTCGAGGA
GGACTCGCGCACCGCCATCTACTTGCTCGACCACGGCGCCGATATGAACGCGCTGACGGA
GGCCGGTGAAACTCCATTACAGCTCGCGATACACTGTCGCCTTGGCTTAGTCGTTGAAGC
TCTTTGTGTTAGAGGAGTGGACATGAGTCGACTCGACGCTAACGGCGTACCTCCACTGTG
GGCCGCACTCGACTCCGGACAGGAGGAAGTTGCAAGTATATTGGTTAGAAATGGAGCAGA
CGCAGATTGCTGGGGACCCGGACCTGATGGCTGCATGCAGACGCTCTTACACAAAGCGAT
AGATGAGAACAAAGAGGCGTTAGCTACGTTTCTGATTCGTTCTGGTTGTGACGTGGAGTC
CGGTCGTCGCGCCGGGCTCGCCGGAGAGGGCGCCGAGCTGGCGGCCGAGGCACAATCACC
GCTGCACCTCTGCTGCACCTGGGGACTCACTGACGTCATACAGACACTACTCGAACACGG
TGCTAACATCAACGCTAAAGACGCTGAAGGTAAAACTCCGCTTCACATCGCGATAGAAAA
CCAGCACGCGGCCATCATCTCTCTCCTTCTAACGCAGCCGAATATAGATCTGACAGCAAG
GGACAACAAAGGTGTGTCACCATTCGCGGCTGCGCTCATTGCACGGAATAATAAGGCTGC
CCAAGCTATACTTGAAAAGAATCCATCTGCAGCTGAACAGGTGGACAAAAAAGGTCGCAA
CTTTTTGCATGTCGCGATTCAGACTTGCGATATGGAAAGCGTAATGTTTCTACTTTCTGT
GGAAGTTGACGTGAACTCACGAGTACAAGACGCAACACTAGCGCCACCTTTGCACCTAGC
GGCGAATGCTGGAAACGAAGTTTTACTCAGGAGTTTGTTATTAGCCGGAGCGAGACCAAA
CGACAGGGATGCTCATAAACGCACAGCCTTGCACGTGGCGGCGGCGGCGGGTCACGCCAG
CATCGTGTCGGCGCTGGTGAGCGACGGCGCCGAGTACAGCGCGGTGGACGCGGCCGGAGA
CAACGCGCTGCACGTCGCCGCGCGCGAGGGACACGCGCAGGCCGCGCGCGCACTGCTCGC
TGACTGCGACATTGACGCGGCCGCTACTAATCTTAAAGGAAGGAATCCATTGCATGAACT
TTGCTGGTGCAAAAAGGATAACGCTGCCACAATATGCGAAATATTTTTAGAATTTATGCC
TGACTATCCCATCAACAGAACTGATTTACAAGGTAATTCTCCACTACTGCTCGCCTACAT
GAACGGTCAGGGCGCGATGTGCCGCGTGCTGGTCAAGGCGGGAGCTTGCCTCGCACAGGA
AAACAAAGAGGGAATCTCTATATTTAACTACCAGGTGGCGACGAAACAACTGTTACATAG
ATTGCTCGACTCTCTCCCTAATGAGGCGCCGTGGGCGGACAGCGACCTCTGTCAGGAGTG
CGGGACCAAGTTCACCATCACTATGAGGAAACATCACTGTCGCCATTGTGGTAGACAGCT
GTGCAGCAAATGTTCGAGTCAAGACATTCCAATACTCAAGTTCGGAATGAACAAACCTCA
GCGAGTTTGTGAGATCTGCTTCAATGTTCTGCAAGTCGGGGCTAGTTAGTGGGTGCGAGT
GGAATATGGCTTTTAAATCGATTATGTGATGTGACCTTTTATGGTGAAATCATTATGTAT
TTTTTTAGTTAGCCGTATATTATTTTGAATTTAACAAGAAAAAAACGCTTGGACACAGTA
TTCTAAATATATTCTATTTTTTATTTAATGGCATATCAAAAAAATATATTTTCCTTCTTG
GAATGTCTGTCAATTATAATCTAAGTTTTAGGGATCCAACTTTATCGAAAAATCTTTTTG
CAATAATTTCAGTTGTCAACTCAGTTCAAGGTGTTCCTAAATAAGTTCAAAAATACGGCT
AACATTAATACAGATTTTATTGAATAATAGAATAAAACCACTGTTCATTGAAAATAAGTT
GTAAACTTCCAACATCAGCTATTTAAAATTAGTTTACTTGAAATAATAATAAATACTGTG
AAAAACATGTTTCTGTGAAGAGTAGTAAATGTAAACTATCGTTCTCAAATTCATATTGAA
CAGTTTTTATTTTACACTTGCAAAGTAATGGATTTAACTTTCGTAAAGTAGTTTATTTTA
AGTCACAATCTATATTCTTTAAAATTATTTTTGTAAGTTTTATTACTAGCGAAGCGCGTC
CATTAGATTTACGGCCGAATGAAACGTAGTGCCTCGAACTTGTTTGTAATATTACTGAAA
TTATTAAGCCAAAGTTTGAAATTGCTTTTATGTTCTTACTTTAACAATTAACACAGAATG
CTAATTGCTGCTGTCAATTTTGTATTTTTTGTTCAACTGAACAATGTTATTGTATTTATG
ATATTATCATTAGATTTATGTTAAAGAAATATAATCATTCCTTTTATCCGGCTAGGCTGT
GGAAATTTTTGACTGGGTACTTATCTTCAATAGTAATGAAAGTGCCATTTCTTTTAAAAT
TTATTACGTCTTGTGTGATATTCCAAAGCTTAAATTCTTTAGTACCTATTTATGATGATA
TATTTTTTCTTTTAAAATTTTATATAATATTGCTATAATATAAAATGTTGTAACCAAAAA
AAAAAATATATCATCATAAATAG
(4703 bp)

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