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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19217c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_Grunge_[Operophtera_brumata]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001105 F transcription coactivator activity
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007275 P multicellular organism development
GO:0008267 F poly-glutamine tract binding
GO:0008270 F zinc ion binding
GO:0021549 P cerebellum development
GO:0021691 P cerebellar Purkinje cell layer maturation
GO:0021930 P cerebellar granule cell precursor proliferation
GO:0021942 P radial glia guided migration of Purkinje cell
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048755 P branching morphogenesis of a nerve
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:8.31 TPM:8.14
ORF EntryO_TrvaFAMAMG22918_complete:A_TrvaFAMAMG_TR19217c0_g1_i1
Sequence
(Nucleotide)
GGCGAAGCTAAACAAAAGGGTAGCATGTAGATAACATTTACTAAATTATTAGTAAATCAG
TCATATTTAATAATTAAAAACAGTTAATCTTATTATACAGTTAAGTGAACTAAACAGTTA
CAATACGCTGGAATCATATAATATTGTGAAATGAAGCACAATGCATCGTGTGATGGTGGC
CATTAGAAGCAATAATTATGTATATTGGCATACTTACTGGTTTACGAACCATCAAATGTG
CTCGCAATAAAGGATTTTGGAGATTTCACACGACAGTTTTACGGAACAAAATGTAAACGG
ATCATTGTGTTGTTACATGTGCTTGAGTGATAGTGCCCAGTGTAAATATTCTACTTAACG
ATGGCCCAAAATCAAGGGGAAGTTCCAGTAGGCACTCCGGCACAGCCCGTTAAGGACAAG
GATATATACGCTTGCTTGCCGGACATTCGTATTGACGGTCCGCTGGGACCCGACGAGCCT
TGTCCAGGAGGGGAAGACTTACGATGGTTACCTGCACAGGCCACGGACAGAGATCTCGTT
ATGTACTTACGTGCGGCTCGTTCTATGGCAGCGTTTGCCGGTATGTGTGACGGTGGCTCT
CCCGACGACGGCTGTGTCGCCGCCAGTCGAGATGACACGACAATCAATGCACTGGATGTG
CTCCACGACTCTGGCTACGACCCTGGTCGAGCGCTACAGGCTCTCGTCAAGTGCCCAGTA
CCAAAAGGTATTGAAAAGAAGTGGTCAGAAGACGAGACAAAACGTTTTGTGAAAGGTATA
AGACAATTTGGTAAAAATTTCTTTAAAATCAAAAAAGACCTATTGCCGCATAAAGACACT
GCTGAGCTTGTCGAATTTTATTATCTGTGGAAAAAGACTCCTGGTGCTAGTAGTAATAGA
CCACATAGGAGAAGAAGGCAAGCATCGTTGAGAAGAGTACGAAATACACGCAATTCTCGA
GCAGGTACTCCTAAAGAACAAACGCCGGAAGTAACTCCTCCCGTGCCGGAGACCAATGGC
TCTAGACCGTCTCCAAATCCTAAAGAGGCAGGAGAAATGAGTTCTGTAACGGAGGACGAA
AATTCTGAGGATGATAGTGATTCAAGAGATGCAGGTGACTTGGCCAAGAGTGAGAATGGC
AGGATACCAGAAAACCCAGAGGATTCACCAAGTCGAATGAGAACAAGAAATAAGTCTAAA
GAACAAACGACACCAAATGGAAAGAAAGCTCAAGAAGAAAGTGACAATGATCAAAAAGCA
AAGGTAACAAAACCAAAACCAACTATACAAAGTAATAATAACAATATCCCTGAAAAGGTT
ATATCCTCACCCGTTAGTAAAGAACCCAAGAAGAAGGTGACCAATGGTAAGGTTGATGCA
TCTAAAGTGAAGAAACGACTTCCTGATGACACGAAACCGGATGGAATTATGGATGGTGAT
GTACAAATGAAAAAGAAGAGAGAAGATCCACCTGAAAGTCCATCAGAAAGCTTAACTAAT
GACAGTTTCCCAGCCATGGATGAAACAGAGAGTCAGGAACCTGAACCGGAGGCTTGTGAT
TTTAGTTTCAACAAGACTGATAAAGAAAATGTTGAGCAAACCAAGGAATCTGAAACTGAA
CAACAGCCCGCAACTAATGATCATGTTGAAACTCAAATTAAATTGGAACCTAATACAGAA
CCAGTCATAAAAACTGAGAAAGATCCCATTCCTCCTATGTTTAAGCCTGCCAATGAAAAG
GAACAAAAGAATATCTTGGACTTGAAAACGGATGTTAATGTGACTAAAAACCATGAAAGT
ATGGACACAAGACCACTGCCAATACAAAATTCAGTGTTCCCCAAAACCGAGCTAATCATT
CCTAAAGTGACTCCGATGACAGTTGAAGCAATGGAAAAAATAAAAATCAAAGAAGAAATA
GATCCAGAAGATCAAACACTTAATCTACATAAAGATGATTTCCAGAAAGACCCATTATCT
CACAGTTTTCCTGGGCACCCTATTAATCAGGCTAACAAACCATTAAATCTAGAAAACACC
AATTTCTTTGTAAAAGACAGTCACATATACAATCCTAAACTCAGTCATAGTATCAAAATT
GAAGGTGTTCCAAATATATTCAATCCAATGAACATCACAAAAGAAAATATAATCAGAAAT
TCAAAAGAATATTCATCTAGCATACCCCAATTTCCATATCCATCTAATCTCAGTTTTGGT
GGTGACCCTGGTAAACATAATCCTCATGGAATAAACCCATTGAAAACTGTCATAAAATTA
GAACCAAGGGATGAAACTACTGAATTAAAGAGTCAAAATACACCTGAGATTTTCACTGCT
ACTATATCTGCTGGAACCAAAGTTGATTCACCAAACACTCCAAGATTGGATTCCTTACAA
AGAATAAGTCCTTCACCAACAAATGTGCATGGATCTTCACCACCACCAATGGAACATCCT
ACTGCAGCAGCCAACACTGAGCCCATCTCACCTGCAAACTCACAAGAAAAGGAGTCAGAT
GGTGATGATAAACAACCCACAGATTTGAAAACTCAACAAATATCAAAACCTGAAAATCAG
AGAGATAGCTTGAGACCACCAGCATTTGCCCATCCAATAAGACCAGAGAACTTGGGGCTC
AGAACTACAGAAGCTCCGAATGTCTCTGTTGCTGGTCAGAATATGCCACCTCCTCCACTT
AGCCAATCTATGCCCGGGCTATTACATCCAGGACCTTTGATATCTGTTGGAAGTGGTGCC
AATGTTGGTCCTTATGGATTTATGCCAACATCTCTGTATGGTCATCCAAGTCATCCTGCA
TTAGATAAACCAGGCTCAATGCCTCCTCTTATGCAACAAATTCCGCCTTCTCATGGTCAT
CCTAGCAGCAATTCTATACAACAATCCAATCAAAATGATCCATCCATGCCTCAAGATTTG
AAGATAAAACAAGAAATACCTGATAACATGCCTGCCAACTTATCTACACAACCAGCAGAT
CCATTACAGTCATTGAAAGAAGTCAAAGTACCAGGTTATCCAATAGGAAGTGCCATAGCC
CAGCATTTGAATACAGAACGAGATAGAGAGTCAGTTTCAAGTGTTGAAAACAGTAGCAGA
CCCCCAAGTCAACCAACAAATGAAAGTTCGAGTATGCCTAGTGGATTTTTGGGCCCTAGG
ATCGAAAGTATAAAGAAGGAACCAGAATTCCTTCATCAACCTCATATCACTCCTGTGTCG
ACCTCTCACGGGCCGCATTCTGACTCTATCAACACTATAACTCCGGTAAAAAGTCCACAT
ACGCCTACACCTATTAAAAGTCAATCAAGTCACAATGGAACTCCTCATGGTTCTCATCGA
TCTACAACTTCACCGTTTTCGAGACATCTTACAAGTCCATCACAGTCTAGACAAATATCT
GCTTCACCGGTGCAACCTAATACACCTGTTTCCCATTCAGCCTTAAACTTAATGAATCCT
ACACCTATTTCGATAGCAGCAACAATACCAGGCCCAGTTATGCATTCTGGTCAACCTGGT
CATCCGCCTCCACATCCATTTTCATCACCTTTACATCATCCTCCTCATCCTTTACTCCAT
CATCCATCTATATTTCAACTATCTGCTGCTGCAGCTGCTCATGCTATGCATCCATACTAT
CCACATCCCCATCCTGGATATTCAATGCCTTATCCCTATCCTTACGGACCTCTACCACAA
CCACACCCGATCCCTCCAATGCATCCGTCGGTCAGTACACCTGGACGACACGATCCAGTG
AAACCTTCGACGATAGAATCAACAACAATGCTTAGTTCACATCACAGTACAAGTTCTTCA
GTTACGACAAGATCGCTCAGGGAGATATCGGAAAGTAGTGAAGATCCGAGAAATCCGAAC
GCTACTACTGAAAGACAACTCCACGAAACTACAATGACACACCATCATTCTACAAGTCAC
CACAGTGCAGTACATACAAGCACAGAAAAGCAACCGAGTCATGCAGGAGGAGGCACGAAT
CACACCCTATCAATATCACATTCGACGTCAAGTAGTTCTTCGCAATCAATACAACACAAA
ATTAATACACAACAAAAGACCGGACATTCAAGTTCACCGCATCATTTATCAGCAAGTGTC
TCTCAAACTACAAGTTCATCGTCAAGTGTGAATGTTAGTAACAATCATACACATCACCAC
TCTCACCATCTTGCCCATCACCCAGAAAGATTGTCACCTGCGGATTCTATGTTGCTACGT
CATCATCCGAAAATGCTTCCTGGTAATCATCTTATGATTCCACCACCATCAATGGGTCAC
CCAATGGGAATAGGACTTCCACCCGGACCTGGCCCAAGTTCAATAGAAAGTTTAAGATTA
CATGCTCAAGCTGCAGCCGGACTGCCCCCATCTCATCCGAGATCTGGATCTCCTCATCAA
ATGCCACACGGCCATCCGCATCTGAGAGGGCCTCCGCGCCCGATTCCTGATGATAATCCC
GAACTTAAACTTGAAACACAATCACAACCGGAAGAAGAAGAAATCCCAAGTCCGGCTCAT
ATACCACATGGACCCAGTCCAGAACCGAAGATAGAGGACACGGAATGTCATAGATCACAA
TCTGCAATATTCCTCAGACACTGGAACCGTGGTGATTATAACTCTTGTGCGCGAACTGAT
CTCACATTTAAACCAGTACCAGAATCAAAATTGGCTCGTAAGCGTGAAGAGCGATTAAGG
AAACAAGCAGAACGTGATAGAGAAGAAAGAGAAAAAATAGCGCAACAGGCGCATAGGAAA
ATAGCGACGCCAGAGAAACCAGATACGAAGCCCCCATCACGCGGAGCCATAGAGACGATA
TCATCACCATACGATCGATTTCCTCGTCCACCCGGATATCCGGATACACCTGCACTCCGC
CAACTTTCCGAATATGCACGGCCCCACGCTGGTTTTAGTCCAGGTAATTTGCCACGACAT
TGTATGGACCCAATGTTACAATATCAACTCAGTTCAATGTATGGCGCGCCAGGTGCCAGG
GAGAGATTGGAACTTGAACACCTTGAAAGAGAAAAGCGTGATCGAGAAATTCGGGAGTTA
CGCGAACGCGAGCTCAACGATCGCTTAAAGGAGGAGTTACTCAAAAACAATGTAGGTCCT
CGTGCGCTCGATCCTCATTGGTTGGAAATGCACCGACGGTATGGAATGCCACCTCCACCA
CCCCAGGGCGCGATCCCTGTACAATTTGGGCTATATCCTGGAGGTCACGCCCCCGGTGCG
TTGTCCCAATTAGAACGCGAACGTCTCGAGCGCCTGGGTATCCCGCCGTCGGCACCCGGT
CCCGCCAATCCCGGAGGCGGTCCTCATCATGGGCACCATCCACACCCGGTCGCCGCTGCG
CAACTTGAAGCTGCAGAACGACTTGCACTCGCTGCTGACCCAATGGTGCGGTTACAGATG
GCGGGCATAAACCCAGAGTATCACGCACACACACATGCGCATACTCATGCACATTCTCAC
ACGCACCTACACCTACATCCAGGACAGCAAGCGGCCGCAGCGCAACAAGAAGCGCTCGGT
CTCGGTCCTTACCGGCCTCTACCCCATCCTGACCTCTTAGGTCGACCGTATGCTGAACAG
TTGGCGCAGCAGGCGGCGGCACATGAGCAGTTGCAGCGACAACTGTTGCTAGACAGAGAG
AGGGGCTTCCTGCACCCTGCGCACCATGAAGACTTCTTGCGTCAGCAGCGCGAGAGAGAG
CTAAAGGTGCGTGCTTTAGAGGAGGCGGCCCGTGCCTCGCGGCCCTAACTCTTTGCCTAT
CAAAGAACTCTCAATGAGTTGTGTATTGTGTGATGATATGACGCTGTAATTATTATTTAT
GTAATATTATGTTATTATAATATGACACTGTCTTAACTTATTCGTTTTATACATTCTGTA
TCGCATGGTCGTATAGTATGCTTGTTTTCCATGCTCAAATATTGTTTCTTACCTACTAGT
CATAATTAAACATTATTTTAAACGAGTTGATGAGTTGTAATTTAGGTCACCAATACTTTG
TATTAAATTATTTGATTTATTATGTATGTCTTGATGGTAACTATTTCGTGTCGTGTATTG
TTGGATAGAAAAAGCAAATGATGGTTTTTCAGAGATAGAGAAAAATACCAACAGTCCACG
TCTCGAAATTGGTTAACCATTTTACCTAATAAGGGTGCTGGTGAGGGTCTTTAGATCGGA
CCACATTATGCTACTTATATTTTATTTTCATGACATAGCGTATAATAAGAGATTTTAGTT
TTAAGATAGTAGGGACTGTGACTTGCCTTTCTAATCGATTGCCTTTTGGACTTAGTGACA
TTCACGTTTAAATATTTTTATAAAGAAAACGTCTGCAATCATAAATTATTTTTAAAAATT
GAATAGTCGTTTGTAGTTGGTGATAAATAACGTTTCCCTCGTAGAAATCAATTGTAATCA
AACGTATAATCGACATATCAAAATACGAGATTGTTTTCGTGAGAATATGAAATGATACAT
CGGCTTCAGTGTTAGTGATTGCCGACAGCAATAACTGTTGATGAACGAAAGGTGCTGACC
TTGCGATTCACGTTAATAGTTCATTCGAATTTTTAATACATGGCTTCGTTTTAACTATAA
GTTACGATTGCTAATAATACTCCTTGAGGAAATAATTCCAGTTTTATGTAATGAGCTATA
ATAACGTCGACCAATGGCTCGGTGCGACTACACCGATCGAAATTACAGCGCATACATTGT
TTATTTATGTTCAACTTTACTTTTTATCGCTTAATATTGCTCAGGCAAAACTAACTCTGC
CGACGATGTCTTAAAGTCTGTTTTACCTCAATAGTTGTAACCGTAGGCACAAATTAGTCT
TACAACATGTCAAATGGACGGTCATAGCTTTTTAGCAGAATACCAGATGTTAACATTTCA
TTTATTGTACAGTCTTCAATGCATAAGCAATAAAGTGTTCAAAGTGTACAGTAAATTTAG
GATATTTTGAGTACCTTAGTCAACTAGTGGATATTTATTGATGATTATTGCGTAAAATTT
TCTTAAATAATAATCCAGAGATTTATATAAATAGATTAAGTAAATAGAAACACAGTTTTA
TCACTTGTCTATAAAAGATGAAATGTAGAAATTGTCGTAAAGGTACAATTCAGATGTTCT
TGTACAATATAACAATTTATATTCATTGTTTTTAAATCAGATAAATGAAGATAATATTAT
AAATAATTAAGAGTTCTAAATATTGTTAAAAACTTATTGTAAATGACAGCCTTATTACTT
ATAAGAAACAGAAACATGAGATTGAATTTCAAGTGAAATAAATAAAGTTAATTGTTTCTA
TAGTCTGTACCATCGACCGTGGTTAATGTACGAGAACATGAACAAATTAAATTATTATAA
AAGTTATTGAAAAGTGAACGCATTAACGGTTTTTTTAAATAGGTCGTGTAACACGATTAA
CATTGTATAAAAGTCAGTTTTGTATTTATTTAAAAAATGTGTAGTGTTGTAATAACACTT
GAATGAAAACACTTTCATTGATTCAAATGCACTGTAAAATAATTTTTACTTAACAAATAG
ATTAGATTTGAATTAAAAAGATAGATTATTCTAGACTTAATGTTTTACGATCGCTTCGTA
GATTTTATGTTGTAGGTAACGCCATAACTACAAATTCTGACAAAAACGCGGGAGTAAAAA
AATGAGTATTATTTTTAGAGACAAATTATATAAGAAATGAGAAGTTACATGTCGATTAAA
TATTCGATTTATTTAGACGATAAGGAATGGATGTCTTAGTGCTTTTGTGTAATTTTTTTT
GAATAATATATGTGAAAAAAAAAAAAAAAAAAAAAA
(7896 bp)

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