SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19177c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagenase-like_[Bombyx_mori]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level		FPKM:198.36 TPM:194.35
ORF EntryO_TrvaFAMAMG22848_complete:A_TrvaFAMAMG_TR19177c0_g1_i1
Sequence
(Nucleotide)
GTGGGATTATAGAGTATACTAGTTGATGTATAAGACGACATTCAGGATGAAAGTCTTAAT
AACTGTGGTGGTGGTGCTGGGTGTGGTGGTGGCGCTGGGTGCCGTGGCGGCGTTCGAGAC
TCCGGTCGAAGTAGACTATCACGAGAATGTCGGGATCCCGATGTACGAGAGCATGAAGCG
CGCTGAAGAAGCTGCCGACTTCGACGGCGCCAGGATCGTGGGAGGAACCACCGCCGTCGC
CGGACAACACCCACATCTAGGAGGTGTTATCATAGCTTTGACAAGTGGTTGGACTTCGTT
GTGCGGTTGTTCATTGTTGACGAACACTCGTTCACTGACTGCCGCTCACTGCTGGAGGAC
CAGGAACGCCCAGGGTCGCCAGCTCACCCTCGCCTTCGGCACCGCCAACATTTTGTCCGG
AGGCACCAGGGTCACCACCACTACCATCCACATGCACGCCAACTACAACATGGTCACTCT
CAACAACGACATCGCTGTGGTCGTTCATCCTTGGGTTGCCTACACCAATCTGATTCAACG
CATATTCTTGCCGAGCGGTGCTCTCCTCAACAACAACTTCGTCGGTACGTGGGCGTGGGC
AGCTGGCTTCGGAAGAACATCCGACGCGGCGTGGGGAGCGAACAACCGCCAGAAGCACCA
TGTATCTCTGCAGGTGATCACCAACGCGGTGTGCGCCCAGACGTACGGCACCTCCGTGGT
GATCCCCGCCACGCTCTGCGTGAACACCGCCGGCGGTCGCAGCACCTGCAGCGGAGACTC
CGGCGGACCTCTCGCCATCACCAGCGGTGGACAACGCGTGCTGATCGGCGTGGTACAGTT
CGGTTCCCAGCAGGGTTGCCAGCGCGGGTTCCCGGCCGGCTTCGGAAGAGTCACCTCCTA
TGTCTCCTGGATACAAGCTAGACTTTAAACTGGACGCGCTTAACTATTGTAACAGAATCA
TGAAAATAAAATAAACATTAATTTTACCTTCTACTTTATTAGACTTTCTTTATAATTGTG
AAAAGAGGTATCTCAATGAAATAAATATTTAAGCCATTGATTTTTAGTTCCTATGTTTAT
GATTTAAACCATTACGTAGTAGGTTGACAATATAAAACATGTAATAAATATTATATTAAA
AAAAAAAAAAAAAAAAAAAAA
(1161 bp)

- SilkBase 1999-2023 -