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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR19147c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TNF_receptor-associated_factor_4_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0019901 F protein kinase binding
GO:0030054 C cell junction
GO:0030323 P respiratory tube development
GO:0031625 F ubiquitin protein ligase binding
GO:0031996 F thioesterase binding
GO:0042981 P regulation of apoptotic process
GO:0045860 P positive regulation of protein kinase activity
GO:0046330 P positive regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050699 F WW domain binding
GO:0090073 P positive regulation of protein homodimerization activity
Transcript
Level		FPKM:1.39 TPM:1.36
ORF EntryO_TrvaFAMAMG22783_3prime_partial:A_TrvaFAMAMG_TR19147c0_g1_i1
Sequence
(Nucleotide)
TAATTATGACTTGTTTTGATTTGCGCGCCGTTGTTATTACTAAACCTAATTAAACTTAGT
GTAAACTTAAATCTTTAGTTTGTCATACAAAACATTAATGACACTAATAAAAAAAAACAG
TCTGTCAATGTCAAATCAGATACCATAGACTACAGAAGGTAAACGTAAAGATAGTGTCAA
AAAATTACAAAATGGCGCCTAAACACTTAGTTAAACTACTCTTTACTCTTGTTAATAGCA
TCAAAGTACCTAGTCAAGAACTTCTTTGAGTTCATTTGACAGTTCTCTTTACATCTACCC
TCCATACTTAAAAAAATGGCAGTGTTACCAACAACAAAAACTTAAACGGCAACAATTTTA
CTAGGATCGACTTTGACCCTCAAGAACATGACGTCGTCCTTCACGAAATTCCTCTTTTTC
AGCATCTCGTGAGACACAAACCTCGGGAATCCGAAGCCTAACGCATCAGGCTCTTTTGAG
GGTCGTTGGAAGTTTTTCCACGTTGGGTCTGGGACAAAGGATTCTACGATGTTGCAGGCT
CGGTCTGGGCTTGAGCTCTGGTCAAACAGAGTGAAGGACACTGTGTGGGCGAAGGGCCAG
CGAAGTAACGCATCGTATTCGCCCGGTAAGATTTTGATGTAGACTGACATGTGGGTCGCT
TCACCGGCTCCATTGCCGTTTAGGAATAGTGACGCCTGCAACTTATATCCATATTGGCTC
GTATAAAACGCGGGTGACACAAGCTCGACGCCATCTTTGCATTTCGCCTCCGCCATCTTA
GCTGTCCAATCAGCGATGCGCCACACCAGTGCGCCGGTGCAGTTGAGCGAGAGCCGCGCT
ACTGCTGCACGAAGCGCATCAAGTTGTCTGGCTTGGCGCGCTGCGACCCCTGATACTAGG
GATAGGTGGGCGCCACAACTCTCTTCTGTGTGACGTTCTACGGCTTGACGTGTGCCCTTA
AACCTACAACCCGCGTCTCTAAACGAACAATGCACGGATGCCGCCGAGCAATGGTCCCTC
AGGTGCGCGTCCAATAAGTCACGTGGTAAGGGCGGCGCCGCACATCGCTGCGGGCAGGGC
ACCGGCGCTCGGGTGCAACTCGCCCCGTGAGCTGATACTGTGTCCTGTGTGTACTTTTGT
CCGCAATGTCTGCAAGGCACGAGCCGTTTGTTGCAGTGCTGCTGTAGGTGTTGTTGTGTG
TGTCTCCTCTGAACTTTGGCACCGCACTTGTTCTCGCAGTATATCGGCTCGTGTCCGCAG
TTACCTTGGTGTTCCTCAAGTGCGCTACCGGAGAACTCGCTATGGCAGTGCTCACAGTTA
GCCCGGCGTCTCGGGCACGTGTAGCGTAGGTGATCCTGCATGAGCACTCGTGGAATCATC
GCGCCGCAGTGAGCAGCGCAGAGCACAGCATCGTGCTTGCACGTGTTCAGATGTGCCTTC
AGTTTACGGAGCTCGTCAGACCACTGACATCCTTCTTTATGATGAATGCAGTACACCACC
GACCCCATTATGGCCTTCTCAGACTCAGGATCGGGATATATGATTTGGCTGATCTCCGTG
ATAGGTATGGGAGAGATTGTTTTCTCTGAACCCTGGGGGAGCGACGAGGAGCTTGGCGTG
GGAGACACTCCAGGGGATCCAGGCTGGCCATTGCCGACGCTCTCCTTCGAAGTTCTGTTC
GGGGACAGCCTCGAAGGGAAGCTGAGGGTCTTCGTCCACTGCGACAGGCTACGCACCATG
TTTACTGTTCATATGCACAACACGTTCACTAAACTCGGCGACGCGCAAACACGTCCGCTC
CCG
(1803 bp)

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