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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18751c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
Transcript
Level		FPKM:40.51 TPM:39.69
ORF EntryO_TrvaFAMAMG22552_complete:A_TrvaFAMAMG_TR18751c0_g1_i2
Sequence
(Nucleotide)
GCGGAGTGAAGTTTCTTACTCATCAATTCGATTGAAACAATTTGTTCTCTGAAGTTCCTT
TCGGATGTGGGCGGTTTTGTGATAGTGCGTTATGTGCGACTAATAATATAAATAGTCTAG
TCGGAACAATTGGAATAAAGTGTATTGTTTAAAAACCCTTTCAATATAATATGACAAATT
GTGCTTATAAACTTCGTAGTGAGAATTAACTGTAAAGATGGCTGATCGCGGAAGTTTTTT
GCGACGATTTCTACCTGCCTTGTCTTGTATGGTGATATTGCTGCTAGTGGAATGCCTTCC
TTTAACGCAAGCAGCGGACGATGGTCACTGCATCTGGTATGGCGTTTGTGCGAACGCTAC
AGAATTCAAAAAGAAGAACTGTGCCTACAATGGTCCTGCTAAACCCATCGAAGACAGGGC
TATGCCCATCATTCAGAAGTACTGTCCCGAGATAGCCAAAGGAGGTTACTCATGTTGCGG
CTACGACCAGCTGTCCCAGCTTCAGATGAACATCGGTATCGCCGAGTCGTTCCTCGGGAG
ATGTCCGTCGTGCTTCCAGAACTTTCTGAAGCCGATCTGCGGCATGGCCTGTGCCGTCGA
TCAGAGCAAATACTTGAAACCGTACATCGAGAAGTTCAATGCTACACATGAGCGAGTTGT
TTCGATCGATTATATTCTCAGCAAGAAATTCATGGATGACATCTACCAATCTTGCAATGA
GGTAAAAATGACATCAACAAATGACAGAGCGGTAAAAGTGATGTGCGGTCAGTGGGGCGA
GGAGTGCACCGCGCAGCGCTGGTTCGACAACATGGGCAACGAAGCCGACAACATGCAAGT
GCCCTTCCAGATCAACTACAACGCTACTGATGTGCCTCTCAACGGATATACTCCTTACAC
TCCTATCGCGACGCCTTGTAATGTGGGGATCGATGGCCAGCCGGGCTGCTCGTGCCTGGA
CTGCGAGGCGTCGTGCCCGGCGCCGGGCCCGCGCCCCGCCCCGCCGCGCGCCTTCTCCAT
CGCCGGCCTGGACGGGTACGCGGTCGTCATGGCCATCGTCTTCCTCATATTCACCACGCT
CTTCCTCAGCGGCATCTTCTGCTGCAACCAGGGAGAGAACATCGTCGGCGTCACATCAGG
CAGTAATCAAGAAATGGCCACTAACCCAGCGGCTGTGAGCTGGACTATGGAAGGGACGAC
CGACGCGACCGACGCGACCTTCTTCGAGAAACTCGGAGCCGCGACTGAGTCCTACATTGA
AGACTTCTTCCAGTGGTGGGGATGTGCCATGGCGTCGAGGCCTTGGCTTGTGCTGTTTGC
GGGTGTGTGCGTGGTGGCGGCGATGGGGTCGGGCGTGCTGTACACGCAGATGACGACGGA
CCCCGTGGAGCTGTGGGCGTCGCCGACCTCGCGCTCACGAGTCGAACGACAACGGTTCGA
CTCATACTTCGAACCCTTCTACAGAACTGAGATGTTAATCATCACCTCAAAGGGATTACC
CGAGATTGAATACAAAAACATGACTTTTGGACCTGTGTTCAACGCCACATTTATGTTGAA
AGTATTAGAACTGCAAAACAAAATCTCAGCGCTCGGCAACGAGACCGGCATCCAGGACAT
CTGCTTCGCGCCGCTCTCCTCGCCCTTCCGCGGGCCCGTCACCCGCGACGACTGCGTGCT
GCAGAGCGTGTGGGGCTGGTGGCAGAACGACGACAGCGACTTTGATAACAACAACCAACA
TCTGGATAAGATATTAGAGTGCTCCAGCAACCCGATCTCCGTGAACTGCCTGGCGCTGTA
CGGCGGGCCCGTGCTGCCCAGCGTGGCGCTCGGCGGGTTCCTGGCGGACGGCGCGCCGCT
CGGCTCGCACGCGCCCTACCACCGCGCGCAGGCGCTCATACTCACCTTCCTTGTCAACAA
CAAGCAGGACAAGACCCAGTTAAAACAAGCCCTTCAATGGGAGAAGCAATTCATAGAGTT
CATGGAGCACTACACACAGAACGAGATGCCGGACTACATGGACATCGCGTACACGTCGGA
ACGATCCATCGAAGACGAACTCGATCGGGAATCCAAGTCCGATATATCGACTATTCTCGT
CTCGTACTTCATAATGTTCGCGTATATCGCTATCTCGCTCGGACGGTTCACGACGTTTGC
GAGACTGCTGATTGATAGCAAGATTACTTTGGGACTTGGAGGTGTACTGATCGTGCTGGC
GTCAGTGCTGTGCTCGATGGGTCTGTTCGGGTACCTGGGCGTGGCGGCCACGCTCATCAT
CGCCGAGGTCATCCCCTTCCTGGTGCTGGCCGTCGGAGTCGACAACATATTCATCTTCGT
GCAGACGCACCAGCGGGAGCCGAGGCGGCCTGATGAAACTGTTGCACAACATATTGGAAG
GATTTTGGGCAAGGTGGGTCCGTCGATGTTCGTGACGTCAGTGTCGGAGTCGGTGTGCTT
CTTCCTGGGCGCGCTGAGCGACATGCCGGCCGTGCGCGCCTTCGCCCTGTACGCGGCCGC
CGCGCTGCTCGTCGACTTCCTGCTGCAGGTCACGTGCTTCGTGGCGCTGCTGGCGCTCGA
CACCAGCCGACAGCTCGACAACAGATTCGATATATTCTGCTGTTTCCGCGGAACTAAGAC
GGATCAAGCTGAACAAGGGGAAGGAGCTCTATACAACTTGTTCAAACATTTCTACGTACC
TTTCCTAATGAAGAGGGAGGTCAGAGCGTCTGTTATGATCGTGTTCTTCGCTTGGCTCTG
CTCCTCTGTGGCTGTGGCCCCGCACATAGACATAGGTCTAGACCAGGAACTATCGATGCC
CCACGACAGCTTCCAACTGAAGTACTTCCAGCACCTCAAGAAGTACCTCAACATCGGTCC
GCCGGTGTACTTCGTGCTGACGGACGGCACCGCGGACACACAACTCAACTACACCATACC
GGAAGTACAGAACTTGTTGTGCGGGTCGCGGTTCTGCAAGCAGGACAGTCTCGCTATGCA
GATATATGCAGCATCCCGCAGTCCGAGTGAGACGTACATCGCGTCGCCGGCCACCTCGTG
GCTGGATGACTTCTTCGACTGGTCCTCATCCAAGAGTTGCTGCTACTACTTCCCGTCTAA
CAGCAGCTTCTGTCCCAATGATTATTCAGATGGAGACTGTCAAGAGTGCGACATCCCTCT
GATACAGCCGGAGGGTCGCCCGCAGCCGGAACAATTCGGGCACTACCTGCCGTACTTCCT
GCAGGACAACCCGTCCGCGCAGTGCGTGAAGGCGGGACACGCCGCCTACTCGCACGCCGT
CAACCTGCGCGACACCGACCCCGCCGCCATACGCGCCACCTACTACCAGACATACCACAC
AGTGCTCCGCAACAGCTCGGACTACTTCTCCAGCCTGCGAGCGGCGCGCACCCTGGCCGG
CACCATGACGGAGACCCTCAACAAGCACCTGCGCGACATGGGCTACACGAACACGATCAA
CGTGTTCCCCTACTCCGTCTTCTACGTCTTCTACGAGCAGTACCTCACCATGTGGTCCGA
CACGTTGAAGAGTATGGGCATATCGGTGCTGTCTATATTCATCGTTACCTTCGTTCTGAT
GGGCTTCGATCTGTTCTCTGCTTTGATTGTCGTGGTGACGATCACAATGATCGTAGTGAA
CCTCGGTGGTCTCATGTACTGGTGGGGCATTAGTCTGAACGCAGTCTCATTGGTCAATTT
GGTGATGGCGGTGGGCATCGCGGTGGAGTTCTGCTCGCACCTGGTGCACTCGTTCAGCGT
GTCGCGCGGCGCGGGGCGCGTGGAGCGCGCGGCCGAGTCGCTGGTGCGCATGGGCTCCTC
CGTGCTGTCCGGCATCACGCTCACCAAGTTCGGAGGGATCATCGTGCTCGCCACCGCCAA
GAGCCAGATCTTCCAGGTGTTCTACTTCCGAATGTATCTCGGTATAGTGCTGTTCGGTGC
AGCCCACGGACTTATATTCCTGCCAGTAATGCTCAGTTACATAGGTTCGCCCGTCAACAA
ACAGAAGCTAGCCAATCAGATGCTGCGCGGTAACGAGACCGCCGTCGCCGAGAGCTCGCT
CACACGAGTACAACTGTAAAACGTCACCGAACTTGAGAATTATATTTTTTTATAAAGTGT
ATTATTTATAAATGATCTGTATGTTATCATGTGATTAATGAAAAGAGATTGTTTTTATAA
TGTTATTTGTTACCCTCACGAGTTCCTAATTAAACTTAACGTGTTTCAGATCAATTAAAA
TATATATGCACAGGAATCTCCTACTTAATCGTAGTACTTAACTTAGAGGGTATTTATCTA
AAGGTTATGGCTTAAATGTACCGACCGACATTTAATTTTGTGATAGATAAAATAAATTGG
GCTTTTTTATAAAAAAAAAAAAAAAA
(4406 bp)

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