SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18749c0_g3_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nephrin-like_[Bombyx_mori]
Ontology
GO:0003094 P glomerular filtration
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019904 F protein domain specific binding
GO:0030507 F spectrin binding
GO:0036057 C slit diaphragm
GO:0043234 C protein-containing complex
GO:0045121 C membrane raft
GO:0051393 F alpha-actinin binding
Transcript
Level		FPKM:1.31 TPM:1.29
ORF EntryO_TrvaFAMAMG22545_5prime_partial:A_TrvaFAMAMG_TR18749c0_g3_i2
Sequence
(Nucleotide)
AGAATTTTGGTGACAAAATACGCATTTAAATTTATTGGGAAAAAATACCTAGGTGGACCT
ATCTAGAAAGAAGACAGTCACGAAATATTAAAGAAGAGAATATAAAAATAAACATTATAA
TAATACTGAAACTAACAACATTCTCACAAATTAGAGTAACTTCAATACATTTTACTATTT
TAGAATCAAACCTATAAGTTCCAGTTTCACCAATCTGCTTAATATAACCATAGATTATTT
AAATAACTTTTAATAATGTTTTAATATAAAAATAGTTAATTGTCATTAGTAAAATTGGGA
ATGTGAAATAAAATACATTAATTTACTCAACTTGTTTAAGATTGCCAAATATCACCCACG
CCAATTTTGGTTCATTCTCAGTTAAGTGGTTAATTAAGGTGTTAAGTTTTTGTTACTCAT
TAAAATTACTCGTAATACTAAAACAACGTATTAACATTTAGTTTAAAACATTTAATCAAG
ATATTCTTAATTTATCTTAATCTACATTACAATTTATACTTTATGCGTTTAAGAATAAAG
TCCTATTTAACAATTTGTAATTTTGACAACCATGTTTCATACATTATTTAAAATCAAACA
GAATCGGAGGAGATACTTTAAAATCTTTATTTGAATAGTGAAAAGAACAAAAAAAAAATG
TTCCACTACGAATTGTACCGAATACTTAAAATAAAATACAATTAAAATATATTTCGACAA
AAATGGTTATAATTTTTTACACTCCACCTAATACAACCTTCATTCATAGAACTCTGCAAT
ACCAGCAATCAAAAATTTACTTCCCATGAACAATTAAGAAATTTGGATAAACTGTTTTTT
ACTTTTACTTATATTTAAAAAAACTGTTAACTGACAGCGGTGGAATCGGACATTTATCTT
CTTTCTTTATGGTCTTACGTATCCCTTTGTTTCTTGTAAAAAATATCAGGAAAGAGTAAT
GGCTGAACAAACGACTAAACTTTGGTAGTTTTTGTTTCAATCCTTACGATAATGTAAATG
TGGGTTTGTTTCTTTGTTATTTATTATTTTCGTTTCATAATAAAAAAAAAACAAAAAAAA
ATAATATTTAGATTTTATTTAAAACTAAGCAACATTTTTTTTTAGTAATTCTGATATTTC
AATTTATCATTTCCTTATGACTGGTTTATCTATGACAAATTTTTGGTTCGACTTTAGTTG
AAAATAGTAATAGTATTACCGTTGAAAAGCTTTACTTTACATTACAACATTCAAGAAGCC
TTTGAATTTTCATTTTAAAATTGAATAAAAACATTAATTGAAAAAAAGCGTTTTTGGTAT
ATTCGACTTCAAACACGTGTGTTTCGGTCGCCGAAATGCACTTTTTTTTTCCTGTTTTGA
ATGAATATGAAAAAATACTCAAAGAACAAAAATCATCAAATGAATCTAATCTAAAGTATC
TCCCCCTATGAGCTACCTAAGTTGCATTATATGCAGCTCTCTCGCACTTTCCCGATAGTC
GCGAGACTGTCGCGTCGCAGTTGCGCAACAGTCGCACTGCACGCACTCGATATATCTGAA
CTCCGCGCCGTCACACCCCTGTTCACTCTTATGCTTATTGATGAGGCACTAGCAGGTATA
CTAGTTTTTTCGCTGTACATACTATGAGCATCACAATCGACGCCGATACCTAACTTGTTA
TAATCATTTATTGCTCTTTTATCATGATGGCAGGGTATGATGTCAGGGTCCGTGTCCTCT
CCCGTGTCCACCTTCAGCTCGTACTGGGAGCAGTACTCCAGCTTGGGCGAGCCGCAGTAC
GTGTTCAGGTTGTCCTGCTTCGAGAGGGACTCCACGCTGTGTTCCATGTAGAGGCCACTC
GCTGAAGGTGGATGCTTGTCTAGGTCATGTCTTCTGACAGCATGACGTCTGTACAAGGCG
GTGATGACGGCGCATATCCCGGAGCACAGCATTGCCGTCACCGACAGCAGAGTCACCAGC
ATCGGTGACCAGGGGATGGCGGTGCTTACTCCAGTATACTTATCAGGAGGTCGTATCGCC
ACAGTGTACAATGTCACCTCTTCGCTCCTCCCCTTAGCGTTGGCGGCGAACAAAACTAGA
CTGTAACTGACTCTGCTGTCCAAACCACGGACTTCGAAGCTTGGTGTGTGGTTCGATGAG
ATGTTTGCTCGGACAGTCATAGCAGGCAGTTCTAGTACTTCCATATAGAACACCTGAGGA
AGTCCACCGTCGAAGCCTTCCACGCATTCCACCTGGAGACTCTCCGAGCTCTGGTTGACT
ACAGAGCAGTTCTGCAGTACCATTGGTTGACCAGCAGCAATGAGCTTGTAGATGCAGGGA
ACCTTCTGTTCTCCGACCATGTTGCTGGCGACGCACAATATTGTACCGAAGTCCATCTCA
GAAGTGGGCGTATAGTGGAGTTTCGAAGTAAAACCAGTGGAGGTAAATGTATTAGCAGCC
AGTTCTGTCTGATCTCCAGAGCTGTTGAAGATCCAGCTGAAGCTAGTAGGTGGAGGACTG
GAGTCAACAGCACAGTTCAAAGTGACTGTCTCTTGTTTCATAGCTCCATACACTTCACCT
TCATTCACTGTCTTGCAGAGAGGAGCATACCTTATCTGTAGAGACACAGGGTTGCTAGTG
GCACTGCCCTCGCTGTTGTAAGCCAAACAGCTGTAGTCCCCAGCAGCTGCTCGGCTGACG
TATTGTAACACCAGACTCTGATCGCTCAGAATGACACCAGAACTCGCATTGTGCTGGATC
TCTTTGGTTCCCTTATACCACGTCAGTTTGTGTATCTTCGGATTCGCTTTGACCAAACAT
TCGAAGTAAACGTCTTCTCCCTCCTTAATGGCTGAAGGACTGAGAATGGAGCCCAGCTTC
AAGGTCACTATGGGCACATAATGCACATTCATTTTCCACCTATCTTCAATAGCGGAGTCA
GCGACGCTTGGGTTCTCTGAGCGACAGACCAAACTCTTCTCGTGGTCTTCAGCTACCGGC
ACGAAGGTCAACACGCTGGTTGTAGCATTGCTCTCCGAGAAATTTTTAGCTGCACTTCTT
TTATACTGTCTTCCACCTTTCCACCAGGTGACTTGGGCTTCAGGTCTTGAGCCAGTGGTT
TTGCATTCCACCTCATATGTTCTGTCTGCTGAGAGTTGCGACCTCTTGTT
(3170 bp)

- SilkBase 1999-2023 -