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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18733c0_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		putative_sorting_nexin_[Danaus_plexippus]
Ontology
GO:0001770 P establishment of natural killer cell polarity
GO:0001772 C immunological synapse
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042493 P response to xenobiotic stimulus
GO:0071203 C WASH complex
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:3.76 TPM:3.68
ORF EntryO_TrvaFAMAMG22511_5prime_partial:A_TrvaFAMAMG_TR18733c0_g2_i3
Sequence
(Nucleotide)
AGCAGACGGTACAGGGAATTCGCTGCTTTACATCAAGTATTGAAAAAGGAATTTATTGGT
TTTAATTTCCCCAGACTGCCTGGGAAATGGCCGTTTAATTTGAGCGAACAACATTTGGAT
TCGAGGAGGCGAGGTCTTGAACAGTATTTGGAGAAGGTGTGCGCGGTCCGCGTCATCGCC
GAGTCGGAGGCGGTACAGGAGTTCCTATCCGACGGCGACGACTCGTGCGGCGCGACGCCC
GTGGAGCTGAAGGTGCTGCTGCCGGACCGCGACGTGCTGACGGTGGCGGTGCTGCGCTCC
ACGCACGCCGACCACGTGTACGCGGCCGTGTGCGACAAGATACAGCTCGCTAAACACTTG
CGGAAGTACTTCTATCTGTTTGAGATCGTCGAGTATAATTTTGAACGCAAGCTGCAGCCG
AACGAGTGTCCGCACTCCCTGTACATCCAGAACTACTCCACGGCGACCAGCAGCTGCCTG
TGCGTGCGGCGGTGGCTGTTCAACCCGGCCGTGGAGCTGGCCGTCGCGAGGGACCCCAAG
GCAGTCAACTTTATATTCTGGCAGGCTGTAGAAGACGTGAACCGCGGTACATGCGTGGCC
GGCGCGCGTCTCTACCAACTCAAGGCGCTACAGGACCCGCGACGAGCACACGACTACCTC
GCCCTCGCGCGCACCCTGCCCGGGTACGGACACGTCGCCGTGCCGCACCCCACCACCGCG
CTCCGTCTGGGCTGGAGCGGCATCCGTCTGTCCCCCCTGTCCCCCGGCGACAAGTCCCCC
GAGTGCGAGCGGACAGCGCGGGGAGAGCGGGGCGAGACGGGCGAGGCGGGCGAGGTGCCG
TGGTCGCGCGTGCTGGGCTGGGCGGCGGACGACGACGCGGCCGCCGTCACCCTCACGTAC
GAGGGGGACGACCAGCAGCACCGCACCGTGCTCATATACACACCATATTATCAATTCCTA
TGCAACTGCATGGACAGAATAGCCGAAGAGGCAAACTGGGCTGACACCGGAGAATAATAT
ACATTATAACAACTAGACAGTAAGAATCTGAACTAATATAGTGTAGCACTCTGGCAACGG
TCACCATATACTGTTCACAATAGATTTTATACACTTACACTTAAAATTAGGAAGAGTTAT
GCGAATCATCTCATTAGGCTATAAGATTTTGTAACCGTTGCCCGTTGAAATTCGAATTTC
ACCATTTAAAAATAGGCTACAAAATCTTGTAGCCATTGACCGTAAATTTATCGAGGCTAT
AAATTTTGTAACCGAGGACCACAAACAGAACTAAATTTAAAAATTTCTAGTTAATTGTTT
GCAACACTGCCAGTAGAGTAGAAAAAAGTAGTAACAGTGTTGCCAGAATTTAGTGTAGTT
TTAGTGGTGTGATTAGAAATCTCCTCATTTTGCAACCTGTGTTGCTAGACGTAGAAAAAT
ATTGGTAGTTTTCTTCTTAACGTAGAATGGCCATCGGTGTTGCCAGAGTGTTAAAATTCT
ACCGAAATTTCGGTGGTTTATTGAATTATTATTTTAAAACAATTGACTAATTATTTATAG
TTTAAATTCTATTTTGTAGGTAAAAAAACCTTGTTGGCAATCGAGTGTTGAACGATTCTA
AACATATTTTTTTTATTATAGTCTTATCTGTGTTTAAAATGAGTTTTTAAGTGAATGAAA
ATAGACAATGTACAAACTCGATAAAAAATAATAAAACCTTAACCCTTAAATAGACCATTT
TTGTTTCACGTTATAAAAAATATATTTGTGTAATGGACATGTATTACTGTCTAGGAAAAA
TG
(1802 bp)

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