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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18711c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Plexin-A4_[Operophtera_brumata]
Ontology
GO:0002116 C semaphorin receptor complex
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0021602 P cranial nerve morphogenesis
GO:0021610 P facial nerve morphogenesis
GO:0021612 P facial nerve structural organization
GO:0021615 P glossopharyngeal nerve morphogenesis
GO:0021636 P trigeminal nerve morphogenesis
GO:0021637 P trigeminal nerve structural organization
GO:0021644 P vagus nerve morphogenesis
GO:0021784 P postganglionic parasympathetic fiber development
GO:0021785 P branchiomotor neuron axon guidance
GO:0021793 P chemorepulsion of branchiomotor axon
GO:0021960 P anterior commissure morphogenesis
GO:0030334 P regulation of cell migration
GO:0048485 P sympathetic nervous system development
GO:0048812 P neuron projection morphogenesis
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0050923 P regulation of negative chemotaxis
GO:0071526 P semaphorin-plexin signaling pathway
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
Transcript
Level		FPKM:22.64 TPM:22.18
ORF EntryO_TrvaFAMAMG22421_complete:A_TrvaFAMAMG_TR18711c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTACATTCGACGATATTTATTAATGGAATCGTTCACGGGTTCACTGTCGGTT
ATTTCATTAATAAGACTGCGAGTACAAATTTTAAAATCACCCGTTGGCGAGCGAAGCCTT
CTCGCTCGCCGGCGAGCTTACATGCGAATTCTTTGCGACACACATTATACACCGATCGAC
GTAACATTAACTCGTACGACGCGAGCACACATAAGACAGACATACACAATTTATTTTATT
TATTACTTTAATATGAATACTTCCGGCACGACCGTGGCCGGCCGAGCTCGTCGTGTAAAA
TCAATACAAAGTTCATTTATATAAAATTAAAAAACGATCTGACCGCTGAAATTATACAAA
AATTACAATATTAAAGACTGTACACTATCTAATATATACAATAAATGCCAGCATAGATAT
GTGCGTGAGCGTTATATACAGGGCGGTGGGGGTTGGCGTCACAGCCTCACAGCATCAGGC
GCGCCGATCACACGTTGTAATCGTGGGCCATGAGGCTGTGCACCTGCTCGAGGCGGTACG
CGAGCCGCTGCTTCTGCGAGAACTCGTCCTCCTCGAGCGTCACCGTCAACTGTTCGTTGT
ATCTGTCCGCGTACGCGTACAGCTCGTTCAGCGCACAGTTCGTGTTGAACTCTTTCGTGT
GGAGGCGGGACTCCTCCGCTAACATCGCGTTCATGTCCTGGTCCGATATTGCTGGCATCA
ACTTAATGTCGGCATAGTAACGCTCCACCCACTCCTTATATACCGGAATGTCTTTAGCGT
AGAGAAGCTTGGACGAAGGCGAATCTTTGCCTAAAATGTGATCAGAAGTCGAACAAGAAT
CCATGAAAGTTTGCGCGATGACAGATAAGCAAGAATCTACAGTATTTGACTTATGAACAT
CGAACACGAAATTAGGATTTTTTATCAGATTCACCCAAAAGCGAAGAGGAAGGGAATTGC
TTTTCCAAGTGTGTACGACTTCAGGGTCGGATATTGCGTGATGTAACGCCTGATCATCGA
GGAAATCGAACATATACTTTATGGCTAAAGGCAACGCCGATCCGCGATGGGCTGTACTGA
AGATGGTCTCGAATAAATCATCGACAAATTTTTGCAAAGTGCCTTTCGTGGCAAGAAGAC
GAGTCAGATAAATCTCGGAGACCATTTTATTGCCACGCTCACCCTCTTTGCGCGCGTCAT
CGTCGTGATGTCTTACGAGATGCCAGTATTTAAAGCCACCACCGTGATCGTATTTCAGTG
GGCTTGCAGGCGGACTAGCAGAACCGTATTTACCACGATTTAACGTTTCATAAGTATGAG
ATTTGTCGTTCTTCTCCATGTTAGATAGATTGTAAACGGAACTCTGTTTTGCGACAAGAC
TAAGGCAAGCGCCATCCGGAACGCGGTAATGATTGAGAGTATTGAGTTTACGCCATTCAC
CTTCACATTTAGTAGTGCTATCCTCGTCGTAGAGAATCAACCTACCACAGGCACCCGTGC
GCCATTCTAAATCGAGTTCGTCACGACTTGGACGTTGGGAGTACGAAGTTGAGCGGTATA
TGGAATCCAAACATTTATCTTTCACTTGACTTATTGTATCACAGTCTAATACTTTAACTT
GTACGTTTTCAGCAGTAGCCTCTAAACCGCTTACAAACAGTGTTTGTTGCGAAATCGATA
CGTTTACGGTCATTGGTTTAAAATCTATTGATTGACGGATAAGTTTTTCTTCACTGAGTG
AATAACGAGCCTCAGACGTAATAGCATCGACGGGTCCTTTATCGACTTGTCCTTTCATCG
ACCTGAATAAGAGATACAAAGGTTCTCCGGCACATTCGCGGAGGAATTTGTAAAGCAAGA
AAGTGAACCAAGCACTCAACATCTTCTCAGCCACACTTTCAGTTCGTCTGAGCAGTAATT
TAGGGTGATTTTTACCTTCCATACACTTCTCGATTAAGTCAGCTAATAATGTCTTTAGTA
CATCAGTACAATACTCCATTTTACTTTGGAGAGTAACCATAATTAACGAAGCAACATTCA
CACGATCACGCATCGAAAAATACCTATTGCTTTCTAAAGTACGAATAAATAATAAAAGGA
ATGTTTTATTCATAATAAGCTGCCCAAACATTCTGAGACCCTTGTCTTTTCTAATAAGCT
CTGGACGTTCCCATTGCAGGACGGCATGGTCGTCGATATTCGGGAACAAAATTTTCATAG
CGTATGTGCGGTAATCCAGGAACGGAATACCACCCGTAACGTCTCCAGTCAAATCTGTCA
TCTCAGTTTGCAACTCCGCAAACGCTTCCTTACACTCCGCAGCTACCCTTAATTCTAAAA
TATCCATCTGTTCTTGCATACTTTTTAATACCCTAATATTTTCTGTTGACTTTCGCCTAT
ACATAACTAAGAATCCCATGACTATAAATAGTAGAATGCCTATACTGATTCCGACTCCTA
TCAATGCTGGTTTCCCTATAGCGGCTTGCAAACCAGTCTGTGAAGTATATGATAGTTTCC
CAATTTTATAAGTAAGAGAACGTCCCACTTTAACAACTACCTCAGGAGTATCAACACCAT
CGGGAAGATCGTCTCTCGATGGAGGACGACAAGTCAATTGGTGTCGAGACAATGAAGTGA
CATTGCAAATACTATCACCGATACGAACTTCTACGTCAGCCTCAGTGCAAGCCCTATCCA
AATTCTGACCATTGATAGTTAAGTAATCAGACTTATAATACTTAACGTCTTCGTCAAATT
TTTCATAAATAGGATCAGGATACATAAGGAAAGCGTCACCAGTCTTGGTGGTTAGATTCT
GTACACTTTGTACATCGTCCATATTAAAACCGTACTCTAATGCTAGAGGCCTATCTGGAT
CTAGATTGAGACTAGCGCTTTCAATGCCGGGTGATTCACAAATAAGTACAGTTTGGAAAT
CTGCTCTATAACAAGGAGCAATATGTGGTCTATTATCATGATATACGTATATTTGAGGCA
AAAGAATCGAATGGAAATTTCTACCTATCACTTTAATATTTATCCCGCCAGAGGGAATAC
CTTTGGGTTGTTTACGTTGTGATGACGACGGCGGACCGGATTCGACAGATACCACGACAG
GATCCTCGATATATTCAAACTTTTGTCGTTCTAAAGTACGCATTCCGTTATCAAAACGCA
TTCGCAATGTCCCCATTTTAAGTTGATAAGAATGGCTAGTTCTACACACAGCCTCTTCAC
GCGATACGGACAATATAACGCAAGGCAAGTCGTCTATATAAGCCTGTATATTGCTACCGG
CATTTAGATATTCACCCGTTATACGTAACTTTGTACCGCCCGACTGAGGACCGTAGATCG
GTTCGATAGAGTTAATTTTAGGATTAACGAAGGTATAATGTTCTTTGGACTCATCGCGAT
AATCAGCAACACGTACAACTACAGGGCCATCTCGGGGGACCTCTTCTCCCGGACCGTCTA
CAGTACATACTATTTGTTTGGTTTTAATGTACAGTTCAATAATAGGTTGACATTTTATAC
CCGCAATAGTAACACCGTTGTAAATGTCCGAAATATTACGACCGAGATTAATTCCCTCGA
TGGTTATATTAGTTCCACCATCCCATGGCCCTAATTTAGGTCTGAACGAATGAATTTCAG
GATTGGGACAAGTTTGTGTACGATTTAACCACACGCTAGGAACCCCGCACTGCTCTTGTA
CTTCACACCTATCAGACCCTTGACACCAACCACATCCAAACTTCTCAGGGAGAGCAAGAC
ACATGCCGCAGTTATCAGCCATATCGTTACAGCGATAAATAAGAATGTGAGTATTATCCG
GATTATCGAGAGGTTTCGATCCACCCCATATAACGGCAAATGAAGCAGTAATATTAGGAG
CACGTGACGTATAAGTAAATTCAACGGCTTCACAGTATATGGTATCAGCTAAAAGCTGAG
CGTTTACATGAGTGACTCGACCCTCTATATTGAATTGACAAACGAATCTTGTCTGAACGA
TAAATTGGCCTATTATGTGGACTTTAACTTTGATTTGCTTTTTAACACCGGAAGGTACTA
ATATCTCGTTGGTACCGTCGGACGTTGAATTTATTGTTGGACAAAAACTCGGACCAGAAC
GATAGCTGGGGCCTATTCTACTGACTCCCGTTACTAAAATATCATTTCGACAATTTTCAG
CGGTATCGTGGGTGCAGCGATGACCATCGACACACCAGTCACACGGAAACGATGAACTAA
CACACTGTGTGCACGAGCTGTACGTATTACAATCAAAGAAAGTAAAATTAGTTGCCACAA
AATCAGGTCCCTGAGTAGTGCGTACCGACAACTTGGCAGTGAAATGATGCTGACCGGCAG
GTATCGGTGGGAGTGTGTCGGTACGCGGAGTTGTACAATTAACACCGTAAGTCTTTCTAG
TTGCATTAGTTATAAGAGTACGATCTAAAGCTGTAAATGCACATAAAAATTGTCCATTAA
GTGTTGGCAAGTTTTCAATAAGTAAATCTAGTGTCCTTGCTGTTGTTCGTTGCAGTTCTT
TAGGTGTTACTTGAGTAATGGTAGTACAACGTCCACTGCGGTAAGGGATCCAATATAGAG
GATCTTTAGCTGCTTCCTGACAGTCTGAACGTAAGCTGCACTTGTTTTCAAGAGAACACC
ATCCACAATACGGGTCTTTGGCTCCGAGACACGTTAAGCATGATTTATAAACGCTACACT
CTTGCACTTTCACTTTAGACACTTTACGTTCAGTCATTACGTATAAATGCATCAATTGAG
TATCAAAGAATAAATCTTTATTCACTGGTGAATCTTCGTCGACTACTATATCTCCATATT
CAAATGCGGAAGTAGCACTTTCAACGACTATTTTCTTAAGATGTCCTTGGGCCGTTCCTG
CAAATACTACTGTATAATCTCCCGTCGCTGTAGCTGCTACCGCGGTAAGTCTTTTCTTGA
AGACTGCGACGGGAACGGCCTCTACTGGTTGTTCACCTCCCAAAGGCGTATTGACATCTA
ATCCACAAAAATCTTCACTAATCGTCTGCAATTTAGTTCCGACACAAGCATGTGAGGGTG
ATATAAAATCAAGTCCCCGAGATCCATTTCCGCTGAAGCATGTCTTAATGTTATGCATGA
ATTTACGACGAATTGCTTTGAGGGAATACACGCAAAGAGCTGACAAATCCGATGGAGTAT
TTGTATTTATTAGCTCACTCTGACTGAAGGCAGCAAATAGAACGTCATGTTGTGCTGTTA
TTCCCAATTCACCTGCAATGACGGAACCGGCTTTTCCCACAAAAGCAGCTTGTACGAGAT
TGTATCCAAAATTACCTCCTCCTTGTGCAGTGCAAGACATTGGGATTTCAGTATATGAGT
AGTAATTCTCATCATCATGACATACACGGACTAACTTACTGTAGTAAGTATCTGATCCTA
CGCCTCGCAGTTGCGTTGTTAGGAAATAACTGAATCCCTCTGAACTAAAGCCATAAACAT
AGTTTATAGGATACCGCTCTCGCGATAGTGAATTGACAAACATTCTCGTGCCAGTCGTAA
CTGCCGTACGTGCTATTCCAAATAGGCGGTCATCTTCTAGCGAACGGCTGCTAACTGTAG
GAACTTCTGAACGATATGGCGAATTTCCGGTAAATGTAACGCCAACGTACATGACTTGTG
TCATAGGAGGATTTGGAGGTCCCGGTGCAATGAATGCAACCGTTGATGCCGTAGCATTGT
TTGCTACTACCGGTTCACGAACTTCACGAACATCGTGAGAAATATTGTTTAAGTTGCGTA
CGGAGCATAATCCTTGAAGTACAGAGCCGCATGTTATGAGGCGACTCGTCGCGTAGTCAA
TTACCAGTGCCTTATTAATATTGTCTGTCGGCTTCTTGACATAGTTGGCTGGACAGTCAA
AAGTGCAGAGAGCAGAATCGTTGACGGGGCCGGTAATAATCGACTGAGCTACTTCCAAAT
CGGGTGATAACTGGTAGATTCTATTGACAGCGCCGATGTAGACTCGGCCCGTATTGCGAT
CCACGACGAGGTGGTTGAACTGGGAGCCCGGTGTAGAGACCGGATCGCTGAAGGTCCGCA
CGACGTCCTGCGAGGCATGCGCGGCGACGCACGCGGCCGCTAACGCCAGCAGCACGCGCC
ACATGTCGACGCGAGCGCATGTGGCCGGCACTCTACCGCGCGCACCGCCGCCCATCACCG
ATGCCACCCGCGCGCTCCGAGCATGGGAATTCCATTGTTGGAGACACAACGGGCTTATTG
TGGTAATCCTGTTCTATATTGAGATCATAGGCGTGTAAGACGCACTGTCATAGTGCGTGC
AAGACGAGACAAGTGACCGAGACCTTTTTAAAAAAATCTCTTTATTGTGTAAAACAATCC
TTGAAAATCCAGACTGGGTGAACTGAGAACACTTATTGCACCACACACAATCTTTGTATA
ATTTGCCCGTAAACGTATTCGTAATACTAAACACCACAATCGACGGTTTGTATCACAACA
TTATACATATAAAAATAACTTAAACGAGTTAATATAAAGCCCGTTGATGAATAAAATATC
ACGTTTGCACTATAGTCCACGATAAGAGCATCAGTCTTCGCACATCGCCGCGGAATGATT
TGGGATTCGCTTTTCGAACGAGTCTAGGCGTGACTGAACGAACAAAACCGAAATCATCCG
ATCACGG
(6727 bp)

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