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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18665c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_striatin-3_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000159 C protein phosphatase type 2A complex
GO:0003700 F DNA-binding transcription factor activity
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0032403 F protein-containing complex binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051721 F protein phosphatase 2A binding
GO:0070016 F armadillo repeat domain binding
Transcript
Level		FPKM:27.44 TPM:26.88
ORF EntryO_TrvaFAMAMG22341_complete:A_TrvaFAMAMG_TR18665c0_g1_i1
Sequence
(Nucleotide)
AAACATTTCGTTTCCCTTTTTTTTTTCGGTTATGTTGCTTTTTACTATCAATTTTGGGAT
GTATGTGTACAAGTATGAATTCGAGGAAAATAAAGGGATACGTAATGTTTTATAATATAT
ATTCTACAAACGCAGTATTAATTACGAACAAACATTACTTACATTATTTAAGATATAGTA
ACACTACTCAATCATTTTTGTTCGAATGCTCACAACTCACATATGAATATTTGAGAGCAT
TATAAATAATGTTTTAATAGAAATTTAATTGATTTAAAATTAAATATTCAAGCTAAAGAA
AGACAATTCGTTCTTTGCAATAGAATATAAAATACTGCGTAATATACTAACTGTACAGAC
ACATAAAAACTTACAAAAGAAATATCATCGGTGTCCTTCCGTATATTATTATATAATATT
TTAATCATAAGATCGCTTAACGATGCATACAAACGAACAATATTCTCACTGCATACCGTA
AAACTGGTGAAAAAGTCGCGATAAAACCTAAAATTCACGTAATGAAAGTCTAAAAATATA
TTATAATAGATTTCAAATGTCTATACATAAATGAGTTGAACGCTCGTCCGGGCCGAAGCT
TCGAGCGAGCGACGTTACATTACTAGATACGACAACGAGAACCCGTCGCCGCGCCCGACC
GCGGAGAGACCGCGGAGACCACGGCAGGCGGCAGTCGGACCGACTAGACTCGCTACTAAA
CGTTCGCATCCAAAACAAAATAACACGGATGTACGTGACGCGTTCAGACGAATACTTTGG
CGAGCCCGTCGGCGCCCGCGCTCGCGATGTACGGCCGCAGCGGGTGGAACGCCACGTCCA
GGATGCTCTCGTCGAACTTCTTGCGGTGCGCCGTGATCTCCTGCACGCACGTCTTCGTGT
CCAGGTTCCACAGCCGCACCGAGCAGTCGTGCGAGCCCGACAGCAGGAACAGCCCGTTCG
GGTCCAGCGCCAGCCCCGTCACCGCGTCCAGGTGCGCCACCATCGCGTGCGAGCACTGCC
CCGACACCGCGTCCCAGAACCGGATGTGCCGGTCCTCGTGCGCCGTCACCACCAGCGGCA
GCGTCGGGTGCGAGCGCACGCGGTTGGCCGGGCTGTCGCACCCCAGCCGCACTGCGACCT
GTCCAGTTTCGAGGTCATAGATAAGGAGCGAGCCGTCGCGGTATGCGACAGCGGCGCGCG
AGGCTGCGTCCGCGAAGTCGAGCGCGGCGGGCACGGGCTGCGGCGCGGAGCTGGAGGCGG
GCGGCTCGTCGGGTCGCAGCGTGGCCAGCAGCGGGCGCGGGGCTCGCGGCGCCCACAGCC
GCACCGTGCCGTCCGCCGACGCAGACGCCAGCCGCCCGCACGCGCTCGCCAGCGACCACA
CCGCGTCCGTGTGCTCTCGCAATACCGCGCCCTGGACAGTAGGGTCGTAGGGATCGTAGG
GGTCGGCAGTGGGAGGCGGCAGGTTCCACACGCGGATGGTTCCGTCGAGCCCTCCGGAGA
AGCACTCCTCAGAGCGCGGCGCCCCCATGGCGAGGCAGAGCACGGGCGCCGTGTGAGCGC
GGAACGTGTAGAGAGGCTCCACGTCGAGTCCGGCGGAGCGCTTGGCCGGTACAGTGCGTT
GTAGGTTCCACAGTTTCAATGTGTGGTCTTCGGACGCTGTCACGAGCGCTGCCTCGGTGG
GGTGGAATGCGATCGCGCGCACCCCATCGAAATGCGATCGTAAAGTATATTTGGCATTCC
ATGTTTTGCGGAAGGATTCCTTGTTGGCCCCGGCGACGTCGTAGGCCTCCGGTTCGTTGC
TGACGGTGAGCTGAGCGAGCTCGCCCAGACCGAGCGTCTCCTCGTCCGCCTCGCCGCCGC
CGCTCGAGCTGCTGCCCGGAGACGCACTCGCACCGCTCGCTACACCAGCCTGATACTCGT
CTCCTTGTCCTGCACTCACAACTTCGTTTATAGTGAGCATGTTGAGTTCATTTAAAACTT
CTTCTGCTTCATGATCCACCTCCTCGCCCTGTTTCCCAGAAGCATGAAGTGATTGTTTGG
CATCAAGATCGTCAATTTCGTCCATGTCCATTTCTTGATTGGTCAAGAATTCAAAGTTAG
CAAACACTGCAGCTGTCTCCTGAACGGACATGCCTTCGTCATTGTAACCACCTCCAGATG
ACCCGCTCGTTTTACGTGGCTCTTTAACATAATCATATTTGCGAACCATATGGTTATTGG
AATAATCACATCTGTCATGTTGTTGTTTATCATAGTTTCTGTAGTTAGAGTTCTCTGCTT
CCTCATTGTTCAGACCCAAAAGTGCACGAACTCTATTTGAACGCACATCCAAAATTGTAT
CCGTATAGCCTATTTCCTGCAAGTACTGTTTAATAAATTGTCTGCCCTGCTTCCATTGCG
CGCGTTCCGAAGGTTCAGGCTCAGTTGATGACTCTTCTGGCGGTGGTCTCACATCGCCTT
GTTGCAACTCCACACCGTACTTGAGCTTGTGGAATTTCGCTCTTTCTTGTTTCAATGCAT
ATTCAAGCATTTTAATCCGCCTAACGAGGTCATTCTTGAGATTTTCTTGACCCTTCCTCT
CGCCTTGAAGGAAGGCAATCCGTGCCTCAAATTCAGCTTTGTCCACCTCCCATTGTGATC
TCTCCAATTCGAATCTTGCCCATTCGTGTTGAATAAAATGCAAAATGCCCGGTATTGAAT
ACTGCACACTTTGACTAGGTTCTTCATTTTGTTTATTATTTACACTGACTCCAATTTGAG
ATCCCACTTGCGCTCCGTTGTGATGAGATACGGAGTTATCATCCATGGCTGTAGGGATTT
TCATGACATGGCCACCATTACCGAACTTTACTTGTCACACTCCTAATAAACTAAGACCGA
GAATAATATAAAACGAAATGCTAACACATGATTAAATACTAATTCTTAAATAACGTCCAC
AGATGTGCCACCATTTAAAAGAAATTTTATCGACGAATTCATGAATGACAAAATTATTGC
ATGACGGAAAGAAAAGTCGAATCGACGTCCGCTCGCACTTCGCTACATTGCTTTTCAAAA
TGTTGCCATTAT
(3072 bp)

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