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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18648c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sodium/calcium_exchanger_2_[Bombyx_mori]
Ontology
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005432 F calcium:sodium antiporter activity
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0006851 P mitochondrial calcium ion transmembrane transport
GO:0006874 P cellular calcium ion homeostasis
GO:0007154 P cell communication
GO:0007612 P learning
GO:0007613 P memory
GO:0014819 P regulation of skeletal muscle contraction
GO:0015297 F antiporter activity
GO:0015368 F calcium:cation antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016528 C sarcoplasm
GO:0021537 P telencephalon development
GO:0030001 P metal ion transport
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031226 C intrinsic component of plasma membrane
GO:0031594 C neuromuscular junction
GO:0035725 P sodium ion transmembrane transport
GO:0042383 C sarcolemma
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043204 C perikaryon
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048709 P oligodendrocyte differentiation
GO:0051560 P mitochondrial calcium ion homeostasis
GO:0055085 P transmembrane transport
GO:0060291 P long-term synaptic potentiation
GO:0060402 P calcium ion transport into cytosol
GO:0070588 P calcium ion transmembrane transport
GO:0071320 P cellular response to cAMP
GO:0071456 P cellular response to hypoxia
GO:1990034 P calcium ion export across plasma membrane
GO:1990035 P calcium ion import across plasma membrane
Transcript
Level		FPKM:5.83 TPM:5.71
ORF EntryO_TrvaFAMAMG22305_complete:A_TrvaFAMAMG_TR18648c0_g1_i1
Sequence
(Nucleotide)
GTAATAGTGTAAGTGATGTAGATAACCGCGAGTGTTTAAAGAAATTTACTACTAGTATTG
TTAAATGAAGAGTTATTGCTCAAAAAAACACAAAAATATTTCACTCAATTCTATGACATA
TGAAGCAAAAAAGCTTATCTTTATTTTTATAGCTTTTTTATTTCCAAGAATATTTAATAT
TAATTTTACAAACACTAACACATACGCCTAGATATACCACAGCCTTTAAGGCTACCGATA
AATATGTACACACACGATTTAAAGTTGCATCTATCAATTCAAATTGCAAAAAATATAAAC
CATAAATAAATTAAATTAGTGAAAATGACTTTTACTTAGTAAAATGTGAAAAATAAAGAA
ACTGAACTGGAGAACCACGAAAAAAAAATAAAAAAATATTTTCGTCATATTGCTCTAATA
TTTATTTACTGTTAGTAGACAAGTTTATGGCCCATCTGATGGTAAATCGTTACTGTCACT
CATGGATGTAATGTCCGGAGAAACAACAGGACAACCTACGGCCTACCATAATCAACAAAG
ACAAAATCAAAAATATATATTTTTATATTCTTTTTTTTTCGCATTCTGAATTGAATGTCG
CAGTATATCGTGTGTGTAACCAATCCTAAATTTTACCAAAGTTATCGAAACATGCTAGAG
GAAGAAGAGTCAAAAGTACAATACAATTTGAGCATGTATTGTTAAAGACGCCATTTTCAA
TTTACATCTACAATATTGAGAATTACTCATTTTATCAAATTTACTATGTTAACACATGCG
CTGCATGACCATCTGTCGATCATTTTGAATCTATATTTTTGGGTACAAATTGACCCACAC
CTTATCGGTCCATCCATTATAATAAAGGATCAGATTTGAACAATACCTTGGACAAATACC
CAAAGTGGAAGTCACCTTGGGTCGATATGGCCCCACGCAGCGACGTGTTAAATGATCTTT
AACATTGTTTACAAAATATACCAATCCATACTTTGTTATTGAAAATGACGATAAATTATT
TTTAGTAGGAATAATGATAGGAAAATTTTCGTAATTGGCTACCAGGATCCAATTACTGCT
ATAATTAATATGACACGTTGTTTAGTGTATAAAATGTCGCAGTATCCACTCAGTTAAGGA
CAAAACATAAATTTTAAAAGAAACACACTTGGTACCCATAAACGTAATCACTATTAAAAT
TTTGATCCAATTAAGTGAAGATTCACTAGCCAATTAAAACATCAAAATCAGTTCACCCAT
AAATATAATATACAGATGATTGATAAACCTATTATTTTTGAAGTTGTTTAAATCATTTTT
GTAACTTGCATTTCGTAGACCAAACAACATGTCATGGTATTCAAACATACCAATAGACCG
CCTTAAAAGCCTTCTATAACGTCGTAAGCTTCCAAGCCGGACATGATAAGGTAGATCAGC
CATAGAGAGAAGAAGAACATGGAAGTGACTATCTTGACGCCTTTAGGACCACCGAGTTCA
CCGCCGATACTTTTGCGCCTTCTAAGGACTAGTACTAATACAGCTACCGCTGCCTCCGAG
CAGAACATGGTTACGCTGAAGGCTAAATTCCCAGGGTCAACATGGAACTTCTCGTTCTTG
CTCCAATGGAAGATGGCAGCTACCGTCCACGCGACCCCGATGCCAAGGAACACGTTGACA
GCATTCGACCCAGTCACATTCCCCACTGACGCATCAGCATATTTGTCCTGGATCGCTGCC
ACTTTACTCGCGAACGTGTCAGGAATACTCGTTCCCAAGGCAACAAACACGATGGCTGTG
ACAGAATCCTTGATGCCGAGTGTACATCCGAAGTGTGAAGCTACATCTCCAATGACAGCC
GTCACCAGCCCGATGCAGATTATGGATACCACGAAGCACACGTATCCACCACCGATGTCT
GTCGGTGGTATCAAAGCGAATAGAATTTTCCAGAACAATGTGACCACGTGGAGGATGTAG
TCAAAACAGGAAGGGGGCTCGTCTGGATCATCTGAACCTGAATTAGCAGTCAAAGCCTCC
GAGAACTGCTCTTTCCACGACGATGTACCTATAATTATGGACGCATTTGCTCTCTGCACT
AACTTATCTACGGTATTCTTAAACTCCTTGCTTTCTTTGATCCGGAGTTGAGCTCTGGTT
ATTTCTCCGGCTTTAGGAAGACCCATCATGGCCACCACAGCTTCTTCTTCTGGCAACGTT
GCAAGATGATTAGCTTCATTACCAATTGTGGAATCATCGTTGTCCTCCGAACATTGCACT
GACATCGAAGCATCATCAGGTATACTTTCATCAGGCTCTCCCAATAGTTCAGGGTTTCCA
AGGTTCACGTAGAACAGCACATCTTTCTCGTAGCTATCTTCTTCGATGATGTGTAGAGGA
ATGTACTTTTCGGTTTCGTTGTTCTCGAAGTAAATGTGGCCTTGTGCGATCTCGTACTGC
GCGCTGCCCTTCGCCGTACCATCCTCGGTCCAGTACGGAATCCTGACCTTGCCTCGAGCA
CCAGCCGTCCTCACAACCTTCAGCTCATACGTCCCCACCGACTCCGTCAGCTCAAAGTCC
CGTTGAGGAAAGGAGAACACGCCGGAATGGTCATCATCCAGGATCACAACAGTGGCTGTA
GATGGTGACGCTAAGCAAGCACCTTTAGGCGAAGTTAAGCGGACATAGAAATGCTCGTCC
TCTTCGAAAACGTCGTCGTCAATTACTTGGACGCTGAAGGTTTTCTCAGTTTCCCCGTGC
TTGAAGTGAAGGGAGCCTTGGGCGGCTACGTAGTCTGAACCAGCTTCGGCAGTGCCGTCT
TCAGTTGTGTACTGAACGGAGATCTCTCCAGTCAGGTCTCCTGATCTTACAACCCTTACT
TCGAAAGATCCGCAGTTCTCCATGACGGTGTAGTGATCGGGGTCAAATCTGACGTTTGGC
CCGCGCGGCTCAATGGACGGTGTACCTGATTCTCGACGTTGTAACTCTGCCTTCACTTCG
CTCAAATCACTTTGGGCTCTCTCAGAAATCTTGCGCGAGAAATCTCCACCGCCTGTCATC
TTCCGAGTCGCTGCAACACGGTAGAACGCACGCGACTTTGGACCTCTAGACATTAATGTC
TCAAGAGCCATTCGTTCTACTGTTTCTAAGTCTTCATCTGGATTCTGTCTTCTCAACTCA
CGAAGAACAGAGACGTATTCTCGTCGCGACTTTTCTAATTCTCGTCCTTCTTCGTCGTCT
GATAAAAAGTCGTCTCCACTGGGCTTCAGTGCCATCTCCACAGAACCGTCGCCCTCCGCT
TCAACGATAACGCCTCGTTCATTCACTCTGTATCCTTTCTTCAGGTATTTGTAGACAAGG
AGGCGGCGGTCCGCGATGTAGGCCGTCATTACAGTCGCAGGAAAGAAAAGAAAAGTTACC
GCACCCTCCCATACTTCGACTTCACTAGGCGAGATGACGGCAAGTATCATGTAAAGCCAG
ACGTAAGCAAATATAGACCATGTCGCAGTCACAAGGAATACTCGAAGATGTTTTATTTTA
CGGACTTCTCCTTCGGGTATCACCACAACACAAATGGCCATAATTACAAATAAATTATAA
GCTGCGGACCCCACAATGGTGCCGGGTCCCAAATCTCCAGCTTCGAAGTTCTTTCCGGCA
ATCTCAATTACCGACAGTAGAATCTCAGGTGCACTGGATCCGAGAGCCATCAACGTCAAG
TTTGCAACAGTCTCGTTCCAAACTCTGACCACAATAATTTGTTCGCTGCCATTCCGCCGC
ACGCGCACCTCCTTCTCCCTGGACGTGATGACTTCTATGGCGGCCATGAAACGATCGGAG
ACGATAGACACTCCGATGAAGAGGTACATCAGCGCTAAGAAGTAAACAAGACCGCGGAGC
GCGATTTGATAGGTGGGGACATCCTCGAGCGGCTTCCAGGCGGGGAGCACCAGGCCGTCG
GAACACTGGAGGACGTGGTGGGGGGTGGTGTTGCGGGAGGCGGCTGGGTCGGCGCGTGCC
GCCACGCAGCAGGCCGCGAGCGCGGCGAGCGCGGGCCGCATGCCGCGTTACCTGTCGCGT
CCCATCTGCGGCGACCGGCG
(4100 bp)

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