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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18627c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_CCCH_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008143 F poly(A) binding
GO:0016607 C nuclear speck
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:1900364 P negative regulation of mRNA polyadenylation
Transcript
Level		FPKM:5.98 TPM:5.86
ORF EntryO_TrvaFAMAMG22246_complete:A_TrvaFAMAMG_TR18627c0_g3_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTAACATTAAAAACATTTATTTACACACTATACTTCCA
TTTAGGTACATCACTATGATAAAAATTACATTCTAGTTTATTAGCACAGTTCTTTCCGAA
ACGACACGGCTTCGGATGATAGAAATGACACACGGGGTTCACACAGTTCGGGTAGAACTT
GCACATCCCCGACACGGGAGACGATGCTATGGATTTGTAGTTCGCTGCCGGGATCACGTG
GGATGCGACAGATGGCGTTGTCATTGCCAAAGGCGCGCCCGGTAAATGCGAATAAACGCA
ATTCCGTCGAGTACAACTCGCTGCAAATTTACATCGCGGATGTATGAAGGCGCAGGTCGA
TCCGTACCTACACATCGGAAACGCTTTGCACCATATTGGCTTGCGTTCTGCTTGAGATAA
AGGAGGAACTGTATCATATTTATGTGTATTAGTTGTAGTTACTACGACATGACTATCGCT
ACTGGTACTCTCTGTCCTTTGTCTTTCTTTTTCACCTTTCTCTTTTTTAGGCACATCAAA
GACAATAGGAGATGCTTTTCTTTTCCTAACAGGAGGCGAAACTTCTAAGGTTTCCGTACT
TTTCCTTTTTTCTATCTTTTCTTCTTTTATTTCTATTTTTGGAGCATCTTTTGAAACATC
AGTAGAGATTTTGGTAATTGAATCCTTATTTTCCGTAGTTTTAGATTCATTTTCTTTTGT
GATTTCTTTATCTTTTTCTTTTGTGATGTCAGTTTCTTGTTGTGTTTCCTTTGTTACTGT
TTCTAATGGTTTTTCTTTTTCTTCTTCGTTTAAAATACCTTCGTTTAGTAATTTCTTTTT
TAGGAAAGAATTTGGATGGTAGCCGTCCATTGTAACTATGAATTGTGTACTTTTGTCTTT
GTCTACTGTTGGGTTATGGATATTTAAAGTTTCTATAATAAGTGTATCGTCTTTTTTAGT
AGTAAACCTCTCTTCTTGTCGCCTCGAGGGAACATAATCGGTATTAACTATTCTCTTCCT
TATAGGAGCTGGTATATACTCTTCTTTTTCTACATCACTTGGTGCTCTCGAGCTCTCATC
ATCATTGCTGTCCATTTCTCCCAGGCTGATGGTGTCAGCGTTCCTATCAGCGTCGTCGGC
GTCAGGCTGGGGGCCGGCCGGGACTTGGATCACGATATTCTGAGCGTCCACTCGACGCAT
CGGCAGTACTAACGCACGCTTCACTTTTTGACCGTCCGTCTCTATTTTTGGGGGTATATT
GAGTAAGCTCTTATGAGCGTCAGCTACGGCCCGCATCAGTAAACTAGAGGCAGTCGGCGC
CACCCGTGGCCTCGGTCGAACTCTCACTACGCTCGTGCAAGACGAACGGACAGGACGATT
TTCTAATACTGACACCCTTGAAGTAACTTTCTTAGAACTATTATCAGATTTATCACCATC
ATCGGATTCAGACTTCCTTTTTTGAGGTTCAGAATGTTCATGGTATTTAATCTTTGTTGG
TTTTTGTGGAGGTTCCGGTTCTGGGGTGAACCTTTCTTGACTATCAGACTTTTTCTCAGT
TTCCCTTGATTCAGTTTTTTTCGAAACTTCCTTACCAAGACGTTCCCTTGCAGGCCTTTT
CGGTAGATTAAGTTCAAATTGTGGTAATAATTCCACTGTTTCTGCACTACGCATCGGGGT
CTGTGGCTCTATTGGTTGAGGTTCTACTGGTTTCGGTTCAGTTGGTTTTGGTTCAATTGG
TTTCGGTGGAGATATGGGTCGCTGCAATGGTGGGGTTTTTGGTATGGGCTGGGAAACTTT
CTGAAAGACTTCATCAGCAAAATCGTTCATCAAATCATCAGCTTCCGTCCGTATATTCAA
GAAATCTTCATCATCTGACATAGAATCCAACTGCTCGGCCAATTTTTGTTTTAGCCCTTG
TATTTTCACTTCAATTGCATTCATCTCTTTAATTTGCTCATCTCTACTTGTTATTGAAGA
AGCAGTAGACATTTCTATATCTTTGCTGGAATCAGCACTGGATGAAAGACTGTGTTCAGA
AGAAATCGTAGCCGGATCAATTATCGGTAGAATTGGTTTCTTTGTTTCTTTAATGGCAGT
TTTCGTTTGCTTATCTTTATCATCTTCTATTAACACTCCATGGTTTTTCAATATCTGACC
GGCAAATACATCAGTAATGGATGGTTCTGACTCTTTTTCCATATTCATTAGTAATGGTGG
TATATTTGGCCGTATAATATCATGGTGTTTGCTTTTCTTCTTTTTGTGGGCCTTTTTGTC
TGCTTTCTTCTGAATGTCTTTCTCTTTTACTTTCTTTTTGGACTTTTTTGAGTCACTCTT
CTTGGATTTTTCTTTGGCTTTCTTCTCTTTAGATTTACGGTCTTTAGAGCTGGATCTCTC
TTTGCTTTTGGATCGCTCAGCAGCAAGCGGTGCAGTAACTGACACTTGCTGCAGCTTCTT
CAAGACCTGATGGAGCCAATTGACGAAGAGTTCAGTGTTGTCTCCGAGAAACAACTGAAG
GTCCTCCTCCATCTGTCCTCTGGTGCGTTTGTTGGCTACCATCACCATCACATAGTCTGG
TAGTTCATCATCAACATAACAGCCCAGTTCAGTCAGTTTGGCCTTGATAGCAGACCGCAT
TTTCTGACCAATCTCGCTTCCAACGACATCCATTTTTGCTAAATGTAAAACTAATTTTTA
ATTGTTAAAAATACACCACAATAGTCACTAAATCACACATTCACGCCGCGAAACTTTAAT
TGCAATTAGAAATTCACCATGCACATCTAAAAATTGTTTTAATTTACATTTAATTTAAAG
GTTTTCTTTTGCATTCTGCAATCTGCATTGATTTTTAACTATGAA
(2865 bp)

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