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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18623c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:3.76 TPM:3.68
ORF EntryO_TrvaFAMAMG22235_complete:A_TrvaFAMAMG_TR18623c0_g1_i2
Sequence
(Nucleotide)
GCGCTTTTGATGGTCTACGCGACATAACATAAAATCATTTTGTGGAAAATTTGAAGTTTG
TTGTTATTTGTGACAACTTATAATTCATAATTATTTATGAAAGCTTCGTCATAATTACCT
TTCCAGGCGTAAGGCTGGATTTTTCAGTTGTGGTTAGCCTGAAAGCGATCGGACTCAATA
GTTCGAGCGGTGTACGGTAGCCATCTTGGATTCGAACAAAGCTTCAGATGTGTAGTTTGT
CTGTTTATCAATAATTTTTGTGCATTTCACTGTAAATAGTTTGTATGTTTAGGATATGTA
CGGAACGTTCGTCCATATGTGTAAATAGCTATGGCTGCGACAAGGAAATTACAAGGTGAA
ATAGAACGTTGTTTAAAAAAAGTAACGGAGGGAGTTGAGACTTTTGAGGACATCTGGCAA
AAAGTACACAATGCGACGAACAGTAATCAAAAGGAAAAGTACGAGGCGGACCTTAAGAAA
GAGATCAAGAAACTACAGAGGTTACGAGATCAGATCAAATCGTGGATCGCCTCTGGGGAG
ATTAAAGATAAGAGTACACTATTAGAATTTAGGAAACTTATTGAAACACAAATGGAAAGG
TTCAAAGTGGTGGAAAGAGAAACGAAAACGAAGGCATACTCTAAAGAAGGGCTCGGGGCG
GCGCAGAAACTCGACCCCGCCCAGAAAGAGAGGGAAGAAATGTCTTCATGGCTCATCTCG
TCCATCGACGCTCTTAATTTACAGGTTGATCAATTTGAGTCTGAAGTAGAGTCACTATTA
GTGGGTAAGAAGAAAAGATTAGATAAAGAGAAACAAGACAGGATGGAGGAGCTGAAATTA
AAACTCGAAAAACACAGGTTTCACATAAAAAAACTCGAAACACTACTGAGAATGCTTGAC
AACATGTCTGTGGACGTTGAACAGACAATCTTTATATTCCAGATAAAAGGTATAAAGGAG
GACGTGGAGTACTACATCGACTCGTCCCTTGAGCCCGGCTTCGAGGAGAACGATTACATC
TACGATGACATACAGGGACTTGACGAGATTGAACTCAGCGGGGTTGGACCTTCGACGGAC
TCTAATAACAGTAATGGATCCGCTGCGACGCCTAATAGTATACTTTCTGGTACAAGTCCT
GTAAGAACACCGACATCAGAAAACCACAATCATTCGACAGACTCAATAGATACAGGAAAG
AAAAAGAAAGATGAAATAATCACAAAACCGGTTAAACCTCTCCCGGTGCGCGCGGTCAAC
GTGGGCGCGATCGGTAATACTACCTGTAATGTTAGTTCCTTGCTCTATAACTCCGCAGCC
GCAAGCAATAGCACGGGAGTGTCTGGAGCGTCCACGCCGAGCAAACCCGCGCCCAGTCCG
CCGCCCACGCGGCCCGCTAACAATACAGAAGTAATCGAGAATGGTCCAGTATCAATCGCG
GCGGCGGTCAACGCGACGTCGACGCATCTACCGCCGCCTCCCTCACAACAACCGCTACCA
ACGTCTCGAAGCACGTCGTCGAGCGGCGGCGCCAGTGCGAGCGTGACCACCTCCCCGCTC
ACCGTCAACGGACCCACCGCCTCCGCGCACCACACGCCGCACCACACGCCGCATCACACG
CCGCACCACGCGCTCAACAATGGACGAGTGAGCGAAACATCAAGTATGTCTGGCGTGAGC
GCGTCGAGTGCGGCCAGCACGGGCAGCGCGCAACACAACACCGCCTCACTCAAGAGCATG
GCGCAGGAGGCCGTGCACCGGGCGGGGCTCGACCTGCACCATCAGAACACGAGACGAAGT
ACGGCGATAGCGCAGGCGCACATCCCGCCGCTACTCGGGGTCGCGCCCTTAGGACCGCAG
CCACTTGACTCGAGTAACCAAGTACAGTTCCAGATGATGGAATCAGCGTTCTATCACATG
CCTCATCCTTCAGACTCTGAACGGACGAGGGTTTACTTACCTAGAAATATATGTCGGACG
CCTGAATATTACAATCAGGTGCTATTACCCCATTCGGACACAGTGGAGTTCTTCCAACGA
CTATCAACAGAGACTTTGTTCTTCGTGTTCTACTACATGGAGGGAACGAAGGCGCAGTAC
CTCGCGGCCAAGGCGCTCAAGAAGCAGAGCTGGCGGTTCCACACCAAGTACATGATGTGG
TTCCAGAGGCACGAGGAGCCCAAGGTCATTAATGAGGAATATGAACAGGGCACATACATC
TATTTTGACTACGAAAAGTGGGGCCAAAGAAAGAAGGAGGGCTTCACGTTCGAATATAAG
TACTTAGAGGACCGAGACTTGAACTGAACGCGCCGCACCAGCGCTGCAGCCGTGCCGCCT
CCGCGCCGCTGCCGTGCCGCCTCCGCGCCGCTCGACAACACTGTGTACAGAACTCTCGAC
GTACGACAAGTGCTCAGTGGACTGTGTTCGTGTGACAGTGATCAAACTTACCAAAAAGGC
GTGGACAGTGTATCAACATTCATTACTACAATACTTCACGAGTGGATATTCCGAAAGTGT
TCACGAATGTTTGCGGTTTCTTCAAATTGTGTTGTTAACTAATTAGATAAAGTGTACCTG
AAGAATTTCAAGAACTGGTATTTATAGATGTTATGGCGATGGTTTTACAGGAAAGATGTT
TTAATTGCCTCCGGAGATGAGCGGAAGAACGTTGTCATTTGATTATAGACGATAGCACCT
TCAAGACTATTGATAATGCTGTCGATAGTTTTATATCGATGCAAAAATTAAACGTCTCGA
TTCTACTATCGATTACACGAGATTTTAATCGAATCATGAATAAATCTTTTGTATAATAGC
TTTCTGGCAGTCAGTGATGTATTTTTTTTATAAATGAACAAAAAAAAGCGAAAGATATCA
TGTGATGCAGTATATTTAGTCAGCCGTTCGCGGTCGTTAAGAACTAATGTGATATTGTTA
TAAGCTCGGAACATTCTTGGATTAATTTTAGTGAAAATGAAGAATGTATGGAAGGCAGTG
CGTTTAGTTGTTAAGGAGTCCTTTACATAGTTTAGAAATTGACTTAGCCTAGTCTAATTC
CGATTTACCACCAATTGGTTGCGATTCGATTATATTAAAGCTAGATCGATTATTATAAGT
GCCGATTATCGATATTGAAATCGATTATTTTACTTTATTCCCGTTACAATGTTATAGATC
TGTATTTTTATAGTATTCCGTTGTGTGATCTCTCATAAGTCATACGTGTTAGTGAAACTC
CGAGTTTGTTCCGAGATGTTTTTATAACTGGCTCCTAGATGTTAAATTTCGTTTTTAAGT
GCGCCAATGTGTGTTTCACTTTGAATTAAAACACTAATTAATTATCCTAAATTTTAACTT
TATTTGAGCATAGCTTGTTGATTACGCAGAATTTGATTAAATGAAAAATTAAGTAGAAAA
TTGATTTTATTTCTGTTCTTTGTGAAACATACATTATGCCTCTGTATAGTTTATCAGTTA
GGTAAAAACAGTGTGATTAGTTTGTTTGTTTGTTATACGCTTTTACATCTCGAATTCACT
TTAACAAGGTGTATTTAATAGTTTTAAATGTAATGATATAATCACAAAGTACTTGTCAAT
ATTTATTGAGAACATTGTTACATATTTATTTAGGTAAGTATCGCTCAAAATGTGTATGTA
AAATTGTAAAGTTATTTATTGATAAACTGTTTTAGTGAGATTGTAGTGATTCTAGATGTG
AAAGTGTACGGCAAGCTGGAAGGACAGTCGTTACTGCCAGACTATAAGCGTTCGTTAAAT
TGATGTTTAAACACCAAAAACATGTTTTCCATAATAGTGAAACCATAGCGTAATGTTTGC
ATTTTCAAAACCTCCATTTATTTGTCAGTTTAGGAAAGTTACGGTTAAAATTGTACAGTC
AACGTCCGGTTGTATGACTCGGAGGCTCGAGCCACCGTCCCGCCTGTTTGCAGCGAGACT
TCAACCTCTCGGTAGTGTGTTGAGGAGCAGCTAGCGGCGTGCAGTGCCGATGCAGTGCCG
ACGCCGCGCCGACGCAGAGCGGGTGCCGCGCGAGTGCAGTGCGCAGGTTGTATTGTAAAG
CTAGGTGTAGGACGTCGCGAGGACAAGTGGTTGAAGTGCGCGATCTCTCGTATATTCCGT
GCGTGATGTTGATAGTTTTCACTTTTGTAAAAAGTCGTATCGTGAGAACAGATGAAATGT
GGTAAATAATAATTTAAAGAATATCTGTACAGTTCTATTTGTATAGAAATAATAAATAAC
GATTTAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAGTCAGAACAGGAA
(4310 bp)

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