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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18623c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:11.70 TPM:11.46
ORF EntryO_TrvaFAMAMG22234_complete:A_TrvaFAMAMG_TR18623c0_g1_i1
Sequence
(Nucleotide)
GCGCTTTTGATGGTCTACGCGACATAACATAAAATCATTTTGTGGAAAATTTGAAGTTTG
TTGTTATTTGTGACAACTTATAATTCATAATTATTTATGAAAGCTTCGTCATAATTACCT
TTCCAGGCGTAAGGCTGGATTTTTCAGTTGTGGTTAGCCTGAAAGCGATCGGACTCAATA
GTTCGAGCGGTGTACGGTAGCCATCTTGGATTCGAACAAAGCTTCAGATGTGTAGTTTGT
CTGTTTATCAATAATTTTTGTGCATTTCACTGTAAATAGTTTGTATGTTTAGGATATGTA
CGGAACGTTCGTCCATATGTGTAAATAGCTATGGCTGCGACAAGGAAATTACAAGGTGAA
ATAGAACGTTGTTTAAAAAAAGTAACGGAGGGAGTTGAGACTTTTGAGGACATCTGGCAA
AAAGTACACAATGCGACGAACAGTAATCAAAAGGAAAAGTACGAGGCGGACCTTAAGAAA
GAGATCAAGAAACTACAGAGGTTACGAGATCAGATCAAATCGTGGATCGCCTCTGGGGAG
ATTAAAGATAAGAGTACACTATTAGAATTTAGGAAACTTATTGAAACACAAATGGAAAGG
TTCAAAGTGGTGGAAAGAGAAACGAAAACGAAGGCATACTCTAAAGAAGGGCTCGGGGCG
GCGCAGAAACTCGACCCCGCCCAGAAAGAGAGGGAAGAAATGTCTTCATGGCTCATCTCG
TCCATCGACGCTCTTAATTTACAGGTTGATCAATTTGAGTCTGAAGTAGAGTCACTATTA
GTGGGTAAGAAGAAAAGATTAGATAAAGAGAAACAAGACAGGATGGAGGAGCTGAAATTA
AAACTCGAAAAACACAGGTTTCACATAAAAAAACTCGAAACACTACTGAGAATGCTTGAC
AACATGTCTGTGGACGTTGAACAGATAAAAGGTATAAAGGAGGACGTGGAGTACTACATC
GACTCGTCCCTTGAGCCCGGCTTCGAGGAGAACGATTACATCTACGATGACATACAGGGA
CTTGACGAGATTGAACTCAGCGGGGTTGGACCTTCGACGGACTCTAATAACAGTAATGGA
TCCGCTGCGACGCCTAATAGTATACTTTCTGGTACAAGTCCTGTAAGAACACCGACATCA
GAAAACCACAATCATTCGACAGACTCAATAGATACAGGAAAGAAAAAGAAAGATGAAATA
ATCACAAAACCGGTTAAACCTCTCCCGGTGCGCGCGGTCAACGTGGGCGCGATCGGTAAT
ACTACCTGTAATGTTAGTTCCTTGCTCTATAACTCCGCAGCCGCAAGCAATAGCACGGGA
GTGTCTGGAGCGTCCACGCCGAGCAAACCCGCGCCCAGTCCGCCGCCCACGCGGCCCGCT
AACAATACAGAAGTAATCGAGAATGGTCCAGTATCAATCGCGGCGGCGGTCAACGCGACG
TCGACGCATCTACCGCCGCCTCCCTCACAACAACCGCTACCAACGTCTCGAAGCACGTCG
TCGAGCGGCGGCGCCAGTGCGAGCGTGACCACCTCCCCGCTCACCGTCAACGGACCCACC
GCCTCCGCGCACCACACGCCGCACCACACGCCGCATCACACGCCGCACCACGCGCTCAAC
AATGGACGAGTGAGCGAAACATCAAGTATGTCTGGCGTGAGCGCGTCGAGTGCGGCCAGC
ACGGGCAGCGCGCAACACAACACCGCCTCACTCAAGAGCATGGCGCAGGAGGCCGTGCAC
CGGGCGGGGCTCGACCTGCACCATCAGAACACGAGACGAAGTACGGCGATAGCGCAGGCG
CACATCCCGCCGCTACTCGGGGTCGCGCCCTTAGGACCGCAGCCACTTGACTCGAGTAAC
CAAGTACAGTTCCAGATGATGGAATCAGCGTTCTATCACATGCCTCATCCTTCAGACTCT
GAACGGACGAGGGTTTACTTACCTAGAAATATATGTCGGACGCCTGAATATTACAATCAG
GTGCTATTACCCCATTCGGACACAGTGGAGTTCTTCCAACGACTATCAACAGAGACTTTG
TTCTTCGTGTTCTACTACATGGAGGGAACGAAGGCGCAGTACCTCGCGGCCAAGGCGCTC
AAGAAGCAGAGCTGGCGGTTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAG
CCCAAGGTCATTAATGAGGAATATGAACAGGGCACATACATCTATTTTGACTACGAAAAG
TGGGGCCAAAGAAAGAAGGAGGGCTTCACGTTCGAATATAAGTACTTAGAGGACCGAGAC
TTGAACTGAACGCGCCGCACCAGCGCTGCAGCCGTGCCGCCTCCGCGCCGCTGCCGTGCC
GCCTCCGCGCCGCTCGACAACACTGTGTACAGAACTCTCGACGTACGACAAGTGCTCAGT
GGACTGTGTTCGTGTGACAGTGATCAAACTTACCAAAAAGGCGTGGACAGTGTATCAACA
TTCATTACTACAATACTTCACGAGTGGATATTCCGAAAGTGTTCACGAATGTTTGCGGTT
TCTTCAAATTGTGTTGTTAACTAATTAGATAAAGTGTACCTGAAGAATTTCAAGAACTGG
TATTTATAGATGTTATGGCGATGGTTTTACAGGAAAGATGTTTTAATTGCCTCCGGAGAT
GAGCGGAAGAACGTTGTCATTTGATTATAGACGATAGCACCTTCAAGACTATTGATAATG
CTGTCGATAGTTTTATATCGATGCAAAAATTAAACGTCTCGATTCTACTATCGATTACAC
GAGATTTTAATCGAATCATGAATAAATCTTTTGTATAATAGCTTTCTGGCAGTCAGTGAT
GTATTTTTTTTATAAATGAACAAAAAAAAGCGAAAGATATCATGTGATGCAGTATATTTA
GTCAGCCGTTCGCGGTCGTTAAGAACTAATGTGATATTGTTATAAGCTCGGAACATTCTT
GGATTAATTTTAGTGAAAATGAAGAATGTATGGAAGGCAGTGCGTTTAGTTGTTAAGGAG
TCCTTTACATAGTTTAGAAATTGACTTAGCCTAGTCTAATTCCGATTTACCACCAATTGG
TTGCGATTCGATTATATTAAAGCTAGATCGATTATTATAAGTGCCGATTATCGATATTGA
AATCGATTATTTTACTTTATTCCCGTTACAATGTTATAGATCTGTATTTTTATAGTATTC
CGTTGTGTGATCTCTCATAAGTCATACGTGTTAGTGAAACTCCGAGTTTGTTCCGAGATG
TTTTTATAACTGGCTCCTAGATGTTAAATTTCGTTTTTAAGTGCGCCAATGTGTGTTTCA
CTTTGAATTAAAACACTAATTAATTATCCTAAATTTTAACTTTATTTGAGCATAGCTTGT
TGATTACGCAGAATTTGATTAAATGAAAAATTAAGTAGAAAATTGATTTTATTTCTGTTC
TTTGTGAAACATACATTATGCCTCTGTATAGTTTATCAGTTAGGTAAAAACAGTGTGATT
AGTTTGTTTGTTTGTTATACGCTTTTACATCTCGAATTCACTTTAACAAGGTGTATTTAA
TAGTTTTAAATGTAATGATATAATCACAAAGTACTTGTCAATATTTATTGAGAACATTGT
TACATATTTATTTAGGTAAGTATCGCTCAAAATGTGTATGTAAAATTGTAAAGTTATTTA
TTGATAAACTGTTTTAGTGAGATTGTAGTGATTCTAGATGTGAAAGTGTACGGCAAGCTG
GAAGGACAGTCGTTACTGCCAGACTATAAGCGTTCGTTAAATTGATGTTTAAACACCAAA
AACATGTTTTCCATAATAGTGAAACCATAGCGTAATGTTTGCATTTTCAAAACCTCCATT
TATTTGTCAGTTTAGGAAAGTTACGGTTAAAATTGTACAGTCAACGTCCGGTTGTATGAC
TCGGAGGCTCGAGCCACCGTCCCGCCTGTTTGCAGCGAGACTTCAACCTCTCGGTAGTGT
GTTGAGGAGCAGCTAGCGGCGTGCAGTGCCGATGCAGTGCCGACGCCGCGCCGACGCAGA
GCGGGTGCCGCGCGAGTGCAGTGCGCAGGTTGTATTGTAAAGCTAGGTGTAGGACGTCGC
GAGGACAAGTGGTTGAAGTGCGCGATCTCTCGTATATTCCGTGCGTGATGTTGATAGTTT
TCACTTTTGTAAAAAGTCGTATCGTGAGAACAGATGAAATGTGGTAAATAATAATTTAAA
GAATATCTGTACAGTTCTATTTGTATAGAAATAATAAATAACGATTTAAAAAATTAAAAA
AAAAAAAAAAAAAAAAAAAGTCAGAACAGGAA
(4292 bp)

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