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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18615c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		retroelement_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.68 TPM:0.67
ORF EntryO_TrvaFAMAMG22220_internal:A_TrvaFAMAMG_TR18615c1_g2_i1
Sequence
(Nucleotide)
GAGTGCCATTATTTTAGACCCACTGCATAAATTATTAAGAAAAAATGAAAAGTTTATATG
GTCAGAGAAGTGTGAAGAATCATTTAATCAAATAAAAAGATATTTATGTCAACAACCAGT
GTTGGAAATATTTGACAAAGACTTACCAATAAAAATTTTCACAGACGCATCCTTGGAGGG
TATTGGGGCCATATTAAAACAGACACAAGAAGATGGAAAAGATAAACCAGTAGCATATTT
TTCCAAAAAACTAAATGAATCTCAAAAAAGGAAGAAAGCCATATATTTAGAATGTCTCGC
TATGAAAGAAGCTGTTAAATATTGGCAACACTGGCTCATTGGAAAACATTTCATTATATA
TTCAGACCACAAACCACTGGAGAATATGAATATCAGAAGTAGAACAGATGAAGAGTTGGG
TGACCTCACATACTACCTATCTCAATATGACTTTACAGTAAAATATATACCTGGCAAAGA
TAACGTAGAAGCAGACTGTTTGAGCCGAAACCCGGTATTAGAATCAGAAGATAACAAAGA
GGAACTATTGAAAATAGTTAATTTAATAAAAATAGAAGATATATTTGAAGATCAAGAAAA
AAATGAAACAATAAAAGTAAAGAAACATAGTTTAATACACAAA
(643 bp)

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