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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18459c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:16.56 TPM:16.23
ORF EntryO_TrvaFAMAMG22162_complete:A_TrvaFAMAMG_TR18459c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTAATATTTTAGTGTTGTATTTCGACAAAATAAGTTATTACTACAATTTCAGT
ATAAATATTTAGTTTTTACAACTAACACAATTAGTGCAACTTGCACTTAGCAAACTCGTT
AGCAATGTCGATGGCTTCGTTAAGTTTATTCGGATTATTTCCAGATGCTTGTGCAGACTC
GGCCTTGCCGCCTCCTTTACCACCGATTACATCGACGACAGATTGTACCCATTCAGAAGC
TAATAATCCTTTCTCCACATCATTTTTGGGCACAGCAGCCAAACAGTAAATCTTTTTGGA
GTCATTATCGACTGAGAAGAACATAGCAGCTGAATTAGGACAATGCTGTTTGACTTGTTT
TAAGGCACCATCCAAAGCTTTTGTGTTACCAAAAGCTTTTAATTCAGACACAATATATTT
AGATTCTTTGTGTTCAAGGCATAATTCTTTAGCCTTTTCAGCAACCTGTGTAATTACTGC
AGCTTTTGCTGCTCTTTCTTTATCATCCAGTTGTTTTTTCAAGTTCTTTAACATGTTTCG
AAGTTCATCTTTTTTCCAATATGATATTTGAGCTTGAGAAATTTCATTTGAAAGTTCTAC
AATTTTCTTGGTTACTTCTTTTTGATTAATGTTTTCGTTTTGTTCTTTTATATAATTAGC
AAGATTGTTTACTTCATTTTCAAGAATACTTAATTTATTTATGGCTTTTATGGCTTCAGG
TCCTGTAAGTGCAACAATTCGGCGGATTCCTTTAGCTATTCCTTCTTCACTTACAATGAC
ATATTCACCTATATGACTGGTACGGTGTAAATGGGATCCACCACAAAATTCAACTGATGT
CTCAAATCCTGTTGGAGCATCAGGATTTTTTATAAGTTCTTCGACAGGTACTCCAACTGA
TACAACTCGGACTGGATCAGGATAGTGTTCATCAAACATAGCCCTCAGTCCATTGATTTT
TTTTGCATCTGATAAGTTAGTATAGTTTGCATAGACTGTCTTATTTTTTGCAATAATATC
CTTTATTTCATTTTCTGCATCTTTGATTTGCTGGACAGTCATGGGACCTTTATTAGTAAA
ATCAAATCGCAGCCTATCAGGCATAACTAAAGAACCTCTTTGATCAGAATCATTGCCAAG
AACTTTTCTTAAGACATTGTTTAACACATGGGTCCCAGTATGATTATTCATAACAAGTCT
TCTTCTTTCTGTATCTATGTGTAGTGATAAAGTATCTCCTACTTTTAAAGTACCTTCAAC
CGTTCCAGTGTGTAGAACATAGCCACCTTTAACTTGAACATTTTTAACTGTAAACTCAAC
AGCTTCATCATCTACTTTCACCATGTATCCCTCATCAAAGATTTGACCTCCTTGCTCAGC
ATAAAAACTACTGCGATCTAAAATTACTCCACACTCTTGGCCAGAAAAAACTTCATTTAC
AAATTCCTTATTTCTTCGCAAAGCCATTATTTTCGCTGTACATGGCGCAAAGCTGTAAAG
TGCATCCTTATCTGTAGAAGATGGCAAATAATTGTATTTTGGAGAATCATCAGTAGCAGG
AATCCCAGTATCTTGTAAATGACTAATAGCATGTATATCTAATGCTAGTAAATCTTCATG
ACCTGCACTTTTGCCTTGAGAAATTAGTTGAGATTCTTTTTTAGATTTTTCATAACCTTC
CATGTCTACAGTAAGACCCTTTTCTTCACACATAAGCTGGGTTAGATCAATCGGAAAACC
ATATGTGTCATAAAGGCGCCAAGCAACATCTCCAGGTAAAGTTTTTGAATCATTTAGTTT
CTCTATGGTTCTGTAAAGTAAATTCCTTCCACGCATCAATGTTTTAAGAAATTGTACTTC
TTCTTCATTTATAGTTTGTATAATTGAATCTGGATCCTTTTTAATTTCTGGGAAAACATC
ACCCAACAAATCAACTACTGTCTTAACTAAAGATCCAAAGAATCCTGGTTTAGCATTAAG
TTTCTCTGAAGCATACCGCACAGCTCTTCTCAGAATTCTACGTAACACATAACCGCGTCC
TGTATTATCAGGACAACCGCCATCTGACAAAGCAATTGTCAAAGTCCTAGCATGGTCAGC
TAAGACACGGTAAGCCATGTCTATTCCATCGACATCATCAGTACCTACTTTTCCAGAATA
TGGTCTTACGCCAGTACCATTTTCAATTGCTTTGAATATTGGCATGAAGAAATCAGTATC
ATAATTGGCCCTTTTGTTTTGTATTACCGAAACTAGCCTTTCAAGTCCTAAACCACAATC
AATATGTTTTTTGGGTAATAATTTCAGGGTGCCATCAGTTTCTCTATTAAATTGTATGAA
CACTAAGTTCCAAATCTCCAGTACATCAGGATCATCCATGTTGACAAGATGTGCAGCATC
TCGTCCTCCTATTCGGTCATAATGAAGTTCTGAGCATGGACCACAAGGGCCTGTTTCTCC
CATCTCCCAGAAATTGTCCTTCATGCTGCCTGGAAGTATATGTGCCTCTGGTATGCCCAA
CTTCAGCCAAATGTTTTTGCATTCAAGATCAGGTTCAAGACCAGATGCTGGATCTCCTCC
AAAATATGTTACATAAAGTCTGTCTCCTGATAACTTAAAGACTTCGGTTAAAAGTTCCCA
TGCCCAAGCACATATTTCCTTTTTAAAATAATCACCAAATGACCAGTTTCCCATCATTTC
AAAAAATGTATGATGATAGACATCTTTACCTACATCATCTAAGTCATTGTGTTTACCGCC
TGCTCTGATACATTTCTGAGTGTTGACAACTCTCACATACTGAGCCATATCAGAGTTTGG
ATCTACTGATCCTAGGAAAATTGGCTTGAATTGATTCATCCCTGCATTTGCAAATAGTAA
AGTAGGATCATCTAAAGGAATAGTAGATGAAGAGTGTACATATTTATGACCTTTACTGAT
AAAGAAATCAATAAAGGTTTTTCTTATTTCATTACCACTCATTGAAGTATCCATTTGAGT
ATGCAATGAATAGATAATCTGGCAACAACAAATTCCTATCTGGTTCGTCTTGTACTTTGC
GTGGTTTGCAGTACCAACAGTACAACCTAGATCATTAGCCCCCACTAAGCTTATCCACGT
TTCGAATTTCAAACCAACACAAAAGTGTCAAATCGTCAAAACCTGTGGTCAAAATGTCAA
AAGCTTATTTTATGTTTTTCTACACATTAAGAAAATAATTGTACGTGCTAAATAAATATA
AAGATGCTGCTGCTTCGACGTCACCGATAAGATCATAACTGA
(3282 bp)

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