SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18459c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.34 TPM:4.25
ORF EntryO_TrvaFAMAMG22160_complete:A_TrvaFAMAMG_TR18459c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTAATATTTTAGTGTTGTATTTCGACAAAATAAGTTATTACTACAATTTCAGT
ATAAATATTTAGTTTTTACAACTAACACAATTAGTGCAACTTGCACTTAGCAAACTCGTT
AGCAATGTCGATGGCTTCGTTAAGTTTATTCGGATTATTTCCAGATGCTTGTGCAGACTC
GGCCTTGCCGCCTCCTTTACCACCGATTACATCGACGACAGATTGTACCCATTCAGAAGC
TAATAATCCTTTCTCCACATCATTTTTGGGCACAGCAGCCAAACAGTAAATCTTTTTGGA
GTCATTATCGACTGAGAAGAACATAGCAGCTGAATTAGGACAATGCTGTTTGACTTGTTT
TAAGGCACCATCCAAAGCTTTTGTGTTACCAAAAGCTTTTAATTCAGACACAATATATTT
AGATTCTTTGTGTTCAAGGCATAATTCTTTAGCCTTTTCAGCAACCTGTGTAATTACTGC
AGCTTTTGCTGCTCTTTCTTTATCATCCAGTTGTTTTTTCAAGTTCTTTAACATGTTTCG
AAGTTCATCTTTTTTCCAATATGATATTTGAGCTTGAGAAATTTCATTTGAAAGTTCTAC
AATTTTCTTGGTTACTTCTTTTTGATTAATGTTTTCGTTTTGTTCTTTTATATAATTAGC
AAGATTGTTTACTTCATTTTCAAGAATACTTAATTTATTTATGGCTTTTATGGCTTCAGG
TCCTGTAAGTGCAACAATTCGGCGGATTCCTTTAGCTATTCCTTCTTCACTTACAATGAC
ATATTCACCTATATGACTGGTACGGTGTAAATGGGATCCACCACAAAATTCAACTGATGT
CTCAAATCCTGTTGGAGCATCAGGATTTTTTATAAGTTCTTCGACAGGTACTCCAACTGA
TACAACTCGGACTGGATCAGGATAGTGTTCATCAAACATAGCCCTCAGTCCATTGATTTT
TTTTTGCATCTGATAAGTTAGTATAGTTTGCATAGACTGTCTTATTTTTTGCAATAATAT
CCTTTATTTCATTTTCTGCATCTTTGATTTGCTGGACAGTCATGGGACCTTTATTAGTAA
AATCAAATCGCAGCCTATCAGGCATAACTAAAGAACCTCTTTGATCAGAATCATTGCCAA
GAACTTTTCTTAAGACATTGTTTAACACATGGGTCCCAGTATGATTATTCATAACAAGTC
TTCTTCTTTCTGTATCTATGTGTAGTGATAAAGTATCTCCTACTTTTAAAGTACCTTCAA
CCGTTCCAGTGTGTAGAACATAGCCACCTTTAACTTGAACATTTTTAACTGTAAACTCAA
CAGCTTCATCATCTACTTTCACCATGTATCCCTCATCAAAGATTTGACCTCCTTGCTCAG
CATAAAAACTACTGCGATCTAAAATTACTCCACACTCTTGGCCAGAAAAAACTTCATTTA
CAAATTCCTTATTTCTTCGCAAAGCCATTATTTTCGCTGTACATGGCGCAAAGCTGTAAA
GTGCATCCTTATCTGTAGAAGATGGCAAATAATTGTATTTTGGAGAATCATCAGTAGCAG
GAATCCCAGTATCTTGTAAATGACTAATAGCATGTATATCTAATGCTAGTAAATCTTCAT
GACCTGCACTTTTGCCTTGAGAAATTAGTTGAGATTCTTTTTTAGATTTTTCATAACCTT
CCATGTCTACAGTAAGACCCTTTTCTTCACACATAAGCTGGGTTAGATCAATCGGAAAAC
CATATGTGTCATAAAGGCGCCAAGCAACATCTCCAGGTAAAGTTTTTGAATCATTTAGTT
TCTCTATGGTTCTGTAAAGTAAATTCCTTCCACGCATCAATGTTTTAAGAAATTGTACTT
CTTCTTCATTTATAGTTTGTATAATTGAATCTGGATCCTTTTTAATTTCTGGGAAAACAT
CACCCAACAAATCAACTACTGTCTTAACTAAAGATCCAAAGAATCCTGGTTTAGCATTAA
GTTTCTCTGAAGCATACCGCACAGCTCTTCTCAGAATTCTACGTAACACATAACCGCGTC
CTGTATTATCAGGACAACCGCCATCTGACAAAGCAATTGTCAAAGTCCTAGCATGGTCAG
CTAAGACACGGTAAGCCATGTCTATTCCATCGACATCATCAGTACCTACTTTTCCAGAAT
ATGGTCTTACGCCAGTACCATTTTCAATTGCTTTGAATATTGGCATGAAGAAATCAGTAT
CATAATTGGCCCTTTTGTTTTGTATTACCGAAACTAGCCTTTCAAGTCCTAAACCACAAT
CAATATGTTTTTTGGGTAATAATTTCAGGGTGCCATCAGTTTCTCTATTAAATTGTATGA
ACACTAAGTTCCAAATCTCCAGTACATCAGGATCATCCATGTTGACAAGATGTGCAGCAT
CTCGTCCTCCTATTCGGTCATAATGAAGTTCTGAGCATGGACCACAAGGGCCTGTTTCTC
CCATCTCCCAGAAATTGTCCTTCATGCTGCCTGGAAGTATATGTGCCTCTGGTATGCCCA
ACTTCAGCCAAATGTTTTTGCATTCAAGATCAGGTTCAAGACCAGATGCTGGATCTCCTC
CAAAATATGTTACATAAAGTCTGTCTCCTGATAACTTAAAGACTTCGGTTAAAAGTTCCC
ATGCCCAAGCACATATTTCCTTTTTAAAATAATCACCAAATGACCAGTTTCCCATCATTT
CAAAAAATGTATGATGATAGACATCTTTACCTACATCATCTAAGTCATTGTGTTTACCGC
CTGCTCTGATACATTTCTGAGTGTTGACAACTCTCACATACTGAGCCATATCAGAGTTTG
GATCTACTGATCCTAGGAAAATTGGCTTGAATTGATTCATCCCTGCATTTGCAAATAGTA
AAGTAGGATCATCTAAAGGAATAGTAGATGAAGAGTGTACATATTTATGACCTTTACTGA
TAAAGAAATCAATAAAGGTTTTTCTTATTTCATTACCACTCATTGAAGTATCCATTTGAG
TATGCAATGAATAGATAATCTGGCAACAACAAATTCCTATCTGGTTCGTCTTGTACTTTG
CGTGGTTTGCAGTACCAACAGTACAACCTAGATCATTAGCCCCCACTAAGCTTATCCACG
TTTCGAATTTCAAACCAACACAAAAGTGTCAAATCGTCAAAACCTGTGGTCAAAATGTCA
AAAGCTTATTTTATGTTTTTCTACACATTAAGAAAATAATTGTACGTGCTAAATAAATAT
AAAGATGCTGCTGCTTCGACGTCACCGATAAGATCATAACTGA
(3283 bp)

- SilkBase 1999-2023 -