SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18451c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tau-tubulin_kinase_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006468 P protein phosphorylation
GO:0007224 P smoothened signaling pathway
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
Transcript
Level		FPKM:0.39 TPM:0.38
ORF EntryO_TrvaFAMAMG22146_3prime_partial:A_TrvaFAMAMG_TR18451c0_g2_i1
Sequence
(Nucleotide)
GGAGGGGGCGGGCGCGGGCGCGGGGGGCGGGGAGCCCGACGACGACGAGCCGGACTGGGG
ACCGCCCCTGGTGTGTTGGTGCGGTTGTCTGTGCCGCGGTCTCGCGAACCGTAGGTTGAG
TTCCCGCGCGGGGTCGGCGGCGTATTTCTCGTTAGCGTTCTGTCGACGCCTTCGTAGAGC
TGGCGTTAAATCAGCGCACAGCGGTCCATCTCCACTCCACGACGCGCACTTGGCGAGCCG
GTGGTCCGCGCTCGCTATGGGGATACGAGATGTACTAGCGCTGCCTGATGAACGATCTCG
TAAGCTCTGAGATCCATCGCCGGCCCCACTGGTCGCTTCTTTAATTTCTTTCTTAATAAC
TCCTATACAACTCCTATCTGGTATTGAGTCTAATTTGGTTCTTTCTACGGCAGGACTTTG
ACTTTTTTCGCCACTTCTCGTGGAAGAACGTTTATCCCTCTGATGTTCTGTAGCGTCGTA
ATATACTGAAGCCTCTTCGTGGTTTGGTCTTAACCCTTCGCCGCCGCTGACGACTGAGTG
AATTTTAACAGAATGATGGGGCGAAGCGCTATCTTGTGGCGGGCGCACCCTGATCTCGAG
TCTACTGGACACGGTGGCGCCCTCAGCGTCGCAAGGCTTCGCTCGGACTTCGCCCCCGCC
CCCACCGGTGTAGGAAGTCGATATGCTCGGCATAGTCTTGGTCCTGGTCACGGTTTGTAC
AGTATTGGCTCCCATCCTGGCCGCTACTCCCCTCATCACATCGACTCTGTACCCGACGCC
GTCGAACGACGCTTGTTGGACTAGTGGTGCTGTTAATGAGCGTATGTGGTCACCTATGGC
GGGCAGCGACCAGCACCTAGGTAAGGTAGGTTGTAAACGTGGGTATGCGTCTATCCCCGG
TATGTTGAGGCATCGAGGGGGCCTTTTAGGGGTCGGGGGCACTATGGGGGCCGCCTGGGG
CACAGGGGACGGCGGGGGTTCTTGAATAACTGGCGGTGTTGGTTGCGGTTGTTGGTTATG
AAGCGCGGTGTTGGCCGACGTGGAGTGTTGCGGTTGAGTGCGGGAACAGCTTGAGACGCG
CCCGCAACGATGTTCCGGGGATTGTAATTGTTCCTGTTTCCATTCATTGTCCGTTGTTTC
TTCAGAATCATCGAATTGTGACTTCCAGAGCGAAACTAGAGTCAAAGCACCTCCTTTAGT
AACCTGTTGTAGTGCTGATACATTCTCGTCGTCCATCACTGCGAACTGTGTATAGCTTTG
ATCGGCTGCACGAGTTCTGGCTGTGCGACGACCACCTCGCTTGAAATGTGTATCCGAATG
CATACTGTCCACATCTGCAACTATTCTTGGACTGACCGCTTCACCAGGAGTTGGCGGTGT
GTGCGCCAAATCTTGTACACACGTTGGCGGAGCTGTCACCACGCGGAGACGGGCCAATGT
GGGACCACCACCGGGTGCTGGTGGCCTGGGCTTGCAAGGTGGAACGCTCTGCCTCTCCGG
TCTGGTTGCCGTTGTTCCTGTGACAGCTGAAGTGCTTGTTTCTTGCTTCGCATGTCTATC
GGGAGATGGCGCCGGTGTTGTCCTGATTTCAACCTCTTTATCTACCGTCGGTTTTTCAGC
CGCAGAATATCCATTGATCTGCGCGTGTGTAGTGTGTCGCGGCGAGGTGGGGGCGAGGGG
AGCGGTCCTCTTCTCTGTTTGTTTGTCCTTCTGTACGTTTGTCTGCGTGTCCGTGGCGAC
TGCGGTCGTCATTTCCGTGTCCGGTCGGCGACGGGTTACATCCGGTTGTGTTTCCGTCGG
TAACGCGTGTTCCGGTGTGGGGTGTACGGATGCTCGAGTACGGGACACACAGACAGCCTC
TTTCTCCCAGTCATAAGGGTCAGAGTCGCGTATCCCTCGTCGCTTGCAGCACCTCTCCAG
TAGTGACGTCAGCATTGCGTAATCCGGAGTATCGGCGTATTCCAACTGTTGTACATGTTC
TAGGAATTGTCGCAGTTCTGACGGTAGATGTTTGAGGAGGAGACGATGGTCGTATTTCTC
TTTCATTAGACCGACCTGTTCTTTGTCCTTAATTTTCCTCCAAGGTAATTGTCCATTGAC
AAATTCTACCAACATGTAGAATAATGACCATAGATCATCGTGTCTACCCATTTCTTTGTT
TTTGTGAGCGTTTATAGAAGCGTATCTAACTGTCCCTCTGAATCCAGCCGCTGCCCTAGG
AGGTCTGACTTGCCCATTACTCGTGGTATATTGTCTAGCTAGACCGAAATCTAGCATATA
GACTTTTCTACAATTTGAAGGATAACGACCTATGCTGAAATTACTCGGTTTTATATCTCG
ATGTAAAAATCCAACAGAGTGTATAGAATCTATAGCTTTGAGTATTTGAAGGCCTAATCT
TAAAGTAGTAGAAAGTGAGAATGCTCCTCTTGGCTGAGCTCTTCTCAACTCAGCCAGATT
CCTGCCTTGTAGTTGCATGACTACGTAATTAAATCTAGCGTTCCTTCCGCATCCGATGAA
ACGGCAAACATGCTCTTTACCTTGCAGTTTCTTCAGCACGGCGACCTCCATCTTGAGCAC
CTGTTTGGGTTGCCTAGCTGATTCCACTTTCAGCGCCACCTGCTCCTGAGTGACCAGGTC
CAGACCCTCGTAGATCTCTCCGAAGCCACCACCACCAATTTTCTTTACAACCTTCCATCG
TTCTTTAACCACGTGACCGGGTTGGAGTAGGTCCTCGGACGCCATCGTGATGTGGTGCGC
GCGACGCGACGTATCACAGCGTGACGCGTCACGCGATACCCGACCACCGAAGTTAGGTAG
CGTGCGCGACCTCAGCAATGGATTGGCTTGTATCCGAGGCTGGGCGCTGGCCGCTTCAAT
GCGACGCTCTTCTCTCTGTGGTTCATTTCTCGTCTGACGCTGTACAGGCGCTGATCCAGA
ACCCTGGGAAGCTGTATCGGCTGATGATGACGAAGATTCTGATCTATTTGACTGATGAGG
CGCTTTTTGTTTAAAAAGCCTCCCTCTCACAAGTCGGCTCTTTTTCCCAAAAACCCTAAT
TTTATACTCGTTTGACGAGCGAAAAATAGTTACGTTCAGAATTCACCCACTAAACACAAA
AACTACACACTATTTAGCAGTCACGTCTAAAATTAACTGAAAACGATAACGGTGTGCACC
ATATTTAAATGCAATGCATTTTAATAATGTTTTTCTATGATTTTCTAGCTCTGGCACTCA
TCGATCGCCAGCC
(3253 bp)

- SilkBase 1999-2023 -