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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18299c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SINA-like_10_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.42 TPM:1.39
ORF EntryO_TrvaFAMAMG22016_complete:A_TrvaFAMAMG_TR18299c0_g1_i1
Sequence
(Nucleotide)
GTGATCATGGCGCTTGCAACAGTGAAACATCGGGATCACTCATTTAATAAAAATTGTGGT
AAGAACCCGTTTAAACGTTGTGTAGGGGATAACCGCGAGTGTTTTAAATAATTTCTCAAT
ATTAACTCATTTTATGCTAATTTTTACAATTCTATCAGCGAATACATGGTTTTATTTCTG
GTGGTATTTACCTATAATTATAAGTATTAGCTGTAACGGTAAATCACATATTTTCTTCTG
AGCAAGACAAAGGTATTCGTAAAGTATAACAAAGAAGAATCTTTTCACAAAATATAGGAA
GTAGAATAGTTGTTTAAATTGCTGTCTTTAAATTATCCTTAAAAATATAATATCACTGTT
ACTATCTAGTAAAATAAAAGCACATTATTAAAATACATTTTTGATATTAAATCCGTCTTA
GACTTAATTTCATAAAAAACAATAGTATTATTCGATTACATGGGTACATTTTTCATCTTT
TTTTAGAACAAGTACACAAAAGAATGAAAATACAAAATATACTAAAAGGTAACAACAATA
GCTGCTTAGTTCCATATAATTATGGCACCATTACAATGTTTTCGACTCACAAACATATGG
GAACTTGGAGTTAAATAATCTTTAGAAGCATTATATTATTACTCTGATTTCAATCCATAT
TACATTTTTCATGATTATACTAGCTGATAGATAGATTTCAAATAATATTGGCAGAAAAAT
GTGTTGTATTTTCATATCAAAAACTACCAACATTTTCTACCAACATCTTCCTCTTGAGCT
TCACTATCTATTAGAAAAACATGTAAAACAGTGGGAAGATTTGTTTTATCAAGAGTACGA
TGTCATCAAGAATGCACATGTGATTATCTAAATCATTGTCTGATTTGATTCGATTTGAGA
CGTAAAATTGAGCTTGAGAACATGTTTAAGATAGAATTGGATACTTAAACTGTTCTTTGA
GTATCTGTCATCAACTACGATAGTGTAGTTGACTAGATATGCTTTTAAAAGTCAGTTTAG
TATACGCCTTGGGATTTTATTCATAATGTTATATGGAATAGACAAAAATATGTTAATGAA
GATATTTTTATTCCTTCCATAACTCGTGTTATTTTTATTGTCAAAAATAGTCAAAATTAC
CTAATAGGGGTTGGGTAAAAATGTTTGACACTTCAAGTCCGATATACCCACTCTGTGCCT
TGGAAAGCATGAGACTTTATGGAATATCTGGTATTTGGTAACTATTTGCTACAAACTTAA
GGATTGACAGAGAAAATGCTACTTTTCTGTTGCTTCTACAAGTTTACAAGCATCGTTCCC
CAAGTTACGTTTCATAGATTTATCACCAGTAAAATCTACAGAATGCTAGGTATCACGACA
TTCTTTTCTAAGCATATCTGAATCTGATTTTCCAATGTTAACGTGGATTGTAATTGCCTC
ATCGTTCTCAGCCTTCATGATAACATCACTCCATTGCACCTCAGCTTTCTTCCCGTAAGC
CTCGTTCTCGATTAAAATAGCCGATTTGGTACTTAAAGCTTTACTTTGGAATTCTACTAG
AGCGCAGTATTCGCTTTTTTTTCGTCTCCGATTTGACGTCTGCGATGTATCCTAATTTTC
GCCTCATGACTTCGACTTTAACGTGGTAGTTGTAAATACAAACTTTGATGATAAAGGCGC
TTTTTTGGTGTAGTAATATTATTTTGTATTTCGTCCTACAGCAGGCTGTCTTTTTGAGCT
TCGTTTGGAAGTTTTCTATCAATATTTTTATCTTTTGTGAGTAGACTGCTATGATATTGT
GGGTTGATTGGAGGTGGGATGATAGCTCTTCGAATGGAACCGAGCAACAGTTGGCTGTTA
TGGGACACATCATGGTGTCGAATTTGCATTCTTCTTCGTGCTTCACTCTTGTGATTGCCG
TCAGGAGTTCTGTGCACCCGCGTCTGTAATTCCTGCACGGTAACATCAAGTCGTTGATGA
GCCTTTGCAGTGCAAGGCAGGGTGCAGCCGGCGCTCTTAAGGATCCTCTGCACCACGCGC
ATCGGGACATTCGCCTCGAACACCGAGCGCACCAGACACCACCGCACCAGGGGCATACGC
ATGGTCCACAGCACTGTAATGGTTCTAAGCAGATACTGCACTCTGAGAATCTGGATAGCA
GTTCATCGCAGTTGGGACAAGCGCACTGGGCTGCGTGACCTTCCTCCGAAGCCACTAGTG
GAGGTCCAACTATTGGTAGAGTTTTATCTTCTATTTCCACGTTCTCTCCACTCGACGAAT
CTGATCCATCATCTTCAATCTTCTTCTCCGTCACAATTGTAACACTATTCTCACCACAGT
CATTGTTCTGAGATCTTTTCTCCGTAACGGAGTGAAACAATCCTTGTATTCTCGGAAACA
TTTTATTTAATTTCGTAAACACACACAATCACACACTGTCACACACTGTTTAACATGTCA
CTATACGTGCGCGCGCGTCGG
(2481 bp)

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