SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18227c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:13.59 TPM:13.31
ORF EntryO_TrvaFAMAMG21983_internal:A_TrvaFAMAMG_TR18227c0_g1_i1
Sequence
(Nucleotide)
GCGGGCGGTGCGGCGGCGGCTGGTGGCCCGGCGGCGGCTGGTGGCCCATGTGGTGCGGCG
GCCCGCCCTGGTGCCCGCCCATGTGGTGGGGCGGCGGTCCGCGGAGCTGGTGCGGGCCCG
GGCCGGGGATCATCATGCGGGGACCGCCCCCGCCTGGACCGTTTGGTCCTCCACCGAAGA
ACTCTCCGGGGTGCGGACCGGGGGGTCCGCCTGGGTGTGGTCCTCTCATACCAGGGTTGT
TTGGACCAGGTGGCGTCGACCTGGTCTTTGATTGACTTTCAAATTGATTCAATGCCTGTT
TAGTGGGTAATGTAACTACTGGGTGTTGGCCATGTATCTCCTTCTTAGGAAGTCGATCCA
TCACCATTCTGATGGACTGATCTGAGCCAAGGGATATAACGCAGAATCCCTTGGACTGAC
CGTTAGCTCTGTTCTCAAAGAATTTGACATCTTGAAAGTCTGTGACACCGACGTCCGCGA
TAGCATTCGCAATATCCTGGTCCGTTGCCCACCAAGTTAGGTTGCCGACGTAAAGTTGAA
ATCGGCGGCCATGATGTCCGTGAGGCGGGCCGTGATATGCGCCGTTACCGTTTGTCTCCT
CCGGTGGGTGCTGATTAGATGTGATGATGGGAGGGCCGTCACCATCCTCGGGCTTCGAAG
CCGGTGCTGAGATCACGTCGTCATATAAATCCACGTTCTCGCCTCCAAATTCGTCCTGTC
GATTAAAGTCCGATTCTATGTCGTCGGCGTACAAATCTATATCAACGTCGCCGTCCGCCA
TTTTACGAAGCGCGAAGTTGAATGTTGG
(808 bp)

- SilkBase 1999-2023 -