SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR18018c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin-conjugating_enzyme_E2_W-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
Transcript
Level		FPKM:19.86 TPM:19.46
ORF EntryO_TrvaFAMAMG21879_complete:A_TrvaFAMAMG_TR18018c0_g1_i1
Sequence
(Nucleotide)
AAGGCAAATGGCGATATCGCGTCGCGACTTCCCGTTCGGAAGGACGTGCTTCGACCACTA
CCCCACCACGACGAACGGCAATACATTTTACCAATATTATCTCAAAATCTATTTGTGGAA
AAGAACACTTTTGCTAATTTATTTATAAATTTAACATTTTAATTTTATACACGAATCATT
AGCCATTATTCACATATCTAAAGGCAAATGGCGATATCGCGTCTATCACGTAAATTGACC
TCAACTTACATTCGTGACTGCCACGAAGTTTTCCACCTGACGTCGTGTCTATAGATGCAA
AAAATACGATTTAAAACATTTTAAACGAATTTTGAAATGGTTAAATAATTAACTACAAAA
AAATAACAAGTAGGTAATATATATTTTATTTATCATGTGTCATATTTAGTTTGGAGTATA
CTATACACAGAAAAAATAATATCAGAGATTTACAAAAAAAAGTATAAAACAAAAACAGAT
AACATCTACGAAACAGTTTTAAACCATTATTTTCGTTTAAAACGCTTAAAACCGACACAT
CTATAATAGTGACGCAACACCACGTAGGCGCGGCTTGGAGTCCCGTGACGTCATAACGCA
GGTGTGACGTCATCGTCGAGCCACAATCACACACACTTTATAACACTTATCACATACTGA
GATTTTATCATCCATGTTCAGAATAAAACGAATTTCTTTGTTACACTGAATCATCATGAT
ACCACCATTTCGTTTTCTTGGGATTTTTATTACATGTTTTAACATAAAACGAATTATCTG
GCGGCCGTCTCTTTTCCTTACAGCTACTGAGCATGGACACGATGGAGAGGCACACGGACT
GCACGGAGAGAGCCGGCGACCAGTCGTCCGTCAGGATGGACAGGCAGATGTGACCGTTGG
AGTACACGTGAGGGTGGACGGGAATGTGACTGCCTATAAACGTTACTTCTGGTGAATCGA
ACGGGTATTTATTTGTGAATTTGAACTGCAGAACAAATTTTTCTCCTTCGTAAAGTGTCC
CCGCTACACCTTCCATGTGAACTGTCCACAGTGTGAGGTTCTGGCTGGCTTGCTCTGCAT
CCACCGTGACACCTGGTGGAGGTTCTTTCATCAGAGACATCAATTCTTTCTGTAGACGCC
GCTCAGATGGAGACATACCCGCCATTGTAATGTAATTGGACGTATGAAGTGAAGTTGACG
TTGCTACAATAGGAAATTTAGGAACTCCAACTTCAATACAGGAAAATGAAAAGCTATATC
AATTTAGATTAATTTTATGATGCAAATGTTGCACTAGGCGATTACACAACTTCACAATAA
AGTTTTAAACACTGAACCAAATTGGGCTAGTTTGTTTTGAAATATTTTGATGGAAG
(1376 bp)

- SilkBase 1999-2023 -