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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17974c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101746153_[Bombyx_mori]
Ontology
GO:0000077 P DNA damage checkpoint signaling
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000781 C chromosome, telomeric region
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001104 F transcription coregulator activity
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016925 P protein sumoylation
GO:0035064 F methylated histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:1.77 TPM:1.74
ORF EntryO_TrvaFAMAMG21852_complete:A_TrvaFAMAMG_TR17974c0_g1_i1
Sequence
(Nucleotide)
GTTCTATTCGGGTGTCCCATGACACCTCTCAAGTTTTTTTTAATTTTTGTAGTATTTAAA
TACCTAATTATATTTAAAACCAATCAACACAAGCAAAATATTAATACACTATAATTTTTG
TCCAACAACGTTAGGCCCAATTTCTTTAATATTAAAACTATTGTTAAATTTAATAACATA
CATTCCATGATTGTAATATTTACACTAAACATTGAAGAATATTTAATCACTTCTGAGTCT
GCTTAATAGAATCCATTGTTCACATTATCACTGTTTTTTATCACTACTTCACATTGTCAC
TGTGTCACTTATCACTATTTCACATTATCACTGTGTCTATCACTTTTGTGTACTTATCAC
TACTCACACACACGGTGTCCGTTATTATAAATCACAGAACGCACCTCAAGTGTCACTTTT
CACGTATAATGAGGTATTTTCTGAAGTCCCACGATCATTCGGGCTCCGTATACAGAAATG
AAAACGAATCGTGGCTGGTCGGGTCAACGATTTGGGCCTGGATGAGGCATTCAATGACCC
AGTGAGTGGATACTAATGGAATCCCATCTTGGTTAGCTTTATTTTGGACTTCATGCGGAC
AATCCCAGTCCGTGACCAGGACAAACGCCCCGGTCATGTTGAGATCTTCTTCGTTGACCA
CTCGAGTGTTAGCCCCGGTCAATGTGCAGACTCTCTCCCAGAACTTGATGAACATGTCCT
GATCGCCACAGAGGAGAATGGTCTTGTCTTTGAAGAATGTTGCATTACGTTTGCTGCCTG
GTGGATCCCAAGTAATATACCGCCTTTGTAGCACAGAGTGTCCGGCGGGCAATGCGTGGG
CATCAACGTCGGGCAACGCGTTTTTCAAACAACTGGCTATGACCCAGTCGTGTAACACGG
CCTTGACGTTGCTGGCCAGACACTGTATGTACTTGGCGGTGAGGCACGGTCTCGGAGCGA
TGAGTTTGCACGATGAATACTTGTTCTTTGGTATCTCGTCGAAGTGGCTATAAACAACTC
CTCCTCCAGCCTCAAGTTGTTCCTTCAGCCGTTCCTTGTTGAAAGGTCTGGTGGAGAACT
CCAGGTCTTCAGTGTCGGTTCCAACGGTGGACGGTGCTTCACTGTCCTCTTCAGATGAGT
ACTGTCTGGCATCTGTTGAGTGGTCGACGGTTTGCTTGTCTTTCTTCTTGTCTCTGTCTT
TTTCCTTCTCAACGCCCGATCGCTTCGAAGTAGCAGCACAAGTCAACAAGAAGTACATTC
CCTTGAATATCTTGGTGTCTCCGTCCGGGATGGGTCCCAGCTGAGAGACAGTGTCCGCGT
CGTTTTCAAACTTTGTCAGCTTCGAGTTTTTCTTGCCGATATTCTGTTTGGCAGCGCCTT
TCAGTTGGAATGGACCGGCTTTAACTCCATCTATTTTCCGTGGCGTCTTCTGCAACTCGG
GTTCCACCCCGGCCACCTCCTCGAGGCGAGTGGTGCTGGGTGCTGAGTTGGAGCTCTCAC
TGATCTCGCTACTCTCGCTGGCAACGCGTTTACGAGCCACGCCTGCTATTTTACTTTTAA
GACCTGATGTAGAAGCTTTGGGGCTCTTCGGTGAGGCGACTCGTTTTCTGGCACTTGAAC
TGCCCTTGTCCCTGCTACGGGCGCTCCTAGGACCCTGTATAATATTATCCAGATCTAATT
CTCTATGGTTTCTCCTGCGAGGTGTGGTGTTAGGAGTGGAAGGTGACCGCGGTCTACCGG
AGTCTTTCAAAGCACGAGCCTGATCTTCAGTCAGATATAACTCGCTTGCCGTCACCACTA
CGAGATTGTCTCCATTCGTAGCACATCTATAAGTAACGGTTCCGCTATCGTTTTCTTCGA
CGCCCAGAACCAAACCAGGTTCATAGTTCTGTTCTTCATCCACCACGGCATACACCAACT
GTCCGGACAGAGGCAGAGTTTTCATATCCCCAAATATTATGAAATCATCAAGCAAAACCT
TCGTTTGACCATCGTCGAATTTGATCAAATATTTGTTCAAATCTGTTATCTCGACCACTT
TGCCTGAGTAGTAGCGTTTGTCAACCCATTTGGCCAACACCACTGTATCTGGCGCATAGC
CTGGGTATTCTTGTTTCATTGCTTTATCTACAGGCGTGGCGGGCCGTGGGGAATTTGGCC
TACGTTTTTGCTTAAGTTTGCTTATAGACTTTGGAGTTGCAACCAAAGATGATAATGGTT
TCTCGTCTTTAGGCGATTTTGGCGAATGTCTACCGTCTCCATTACTTGGGACCATTTCTG
GGGAGTTCATATCGTACATAAACTCTGCTTCTTCCGGCTGAGTTGGCAGTATAGCTCGCT
TAGTTTTCCCCGCCATGGGTCTGCGACCACGCACGCGGGTTTTCTTTAAAGAACTTTTAG
GTGTCGCCTTGTCACATTTACTAACTTCCTCGGGACTTGCGTTTCCGTTGCTTAAACTGC
CGTCAGAAAACGTCTGGACAGCGACAGAAACTTTATCTTCGTTCATCGATCGATTGCCCT
CTTCGGAAACATCGCGGATGTGCGAAAATATCTCTTGGAGCTTCTTCATTAGGGCTTCAT
ATCCTTTGATGGATGAGGTCGGGTTGGACACCGATTTCCTGGGCGGTTGGGGCACGACAA
AAGCCCCATCGCTAGTTCTGTTGCTGCTTAAAGTTGACGTCGAACTGACAGTCGAAGCGA
AAGACGTTCTATTTGGTAAATTGATCATTCCCCCACTAGTAACGCTTGATGGGGAATTGT
TGACCGAAACGTCTCCTAAATAGGGATCAATGGTGAACCGTTTGGATATCCTCTGATATT
CCTTGCACATGTCCATGCCTAGATCGTTGTCGGTTCTTACGACGTATAAAGACAGGAATT
CGTTGTCTTCATTATGGCTCACATGGACGTCAAATACTGGAATGTGGGGAGTGGAAAGTG
GGAGCGAATGTCCGTTCTGTAGCGGCGATATTGTTGAAGGAGTTGTGGTGTTACTCGCGC
GAAATGATTCGTTTTTAAGTCGTTTTCCCTTCAAATTGCTCAGTTTTGCCATATCTGGGG
TGCAATCGCTGTCTTCGATTACGTCGGCCGGGGTAGAAGAATTACCGTTAGATAACTTTG
ATATTACTTTAGAAGCGGCACTGGGAATGTGATCAGGGCTCTCCAGGTTCAGTGAACATA
TGCTGTCGGTACTTTCTTGGTCTGTCGTTTTGCTCAAATTTAAGGTCGCTCTAGGAATGG
AGGTGTTATTTTCGGAATGTATGTGACCTTCACTATTTGTTTTTTCTATTGGATCTATTG
GATTTTTAACGAGACTTGGGTCAGTGTTGTATTTCACTTTCACTGGTTCATCAAGGCTTG
GGGATAATTCTAAATGCATGCCTTGAGAATCGTCTAAGTTAGACTCTTCTTGAATTGTCT
CTGGTACTTTTGGTATTTCTTTGACGACGATTTCTGCTTCTTTTTCAGGTAGTTTTAAAT
CTTTAAGAGAAAGATTCTTTTTGGGGGTTTTTCGCGTGTAATCTACACTTGCAGGTCGCG
ATTTTGGAGTTTTCGGAGTTTTTACTATGTCAACACTATTGCTTCTTTTTGATACATTTC
TGGGGCTAGATCGTAATGGCGTACGAACGCGTGAAGTCGACGGTAATTCTTGTATTCTCT
TGGATCCTGTTATTTCTGAAACTTCATCGTCCAAAGTTTGCGTGGACACCGCAAATTCAT
CTTCATCTAAATCCAATTTTTGTATTTTTGAGCTACTTTCTGGTAATTCGTCTGAGATTT
TGCGTTTTGGAGCTGGTTGTTCTTCAGGACATTCTGCTGGCTCTTTCTTTTCTTCAGGGG
CTGAACTGGAGACAATCTCCATTTCTTCAGGTTCGTAAACCGGACTCTCAGGGAAGAGTA
TTTGTGAACCGTCAGAAGGTTTGGATGCTTCGACATTGACATTGGTAGAAGTGTCAACTG
CAACAGAAGTATCGGCTACAGTTGAAGTGTCAGCTAGATTAGAGGTATCCACTACAGTAG
TTGGTTCTTCTGAAGATGAAACTGTTTCTTGGGGCACAGAATCCATTTCGATGGTGTTGT
TTGGTAATTCCTCCATCGCACGTTCAATTTTAATTCAGAAATCAATTATAAAGTGGCGCG
CAAAGACATGAGCATCTGTCACACGATAAAACTCTCAATTGAAACTATTTTAGAAATGTA
AAACCTAAGAAACTAATGCCATACTTGGACGAAATAAACGCGAATTGTATTTATTATTCA
ATTATAATGAAAGCGATTATTTATTGATTTTAATTTCAAACGAACAGATTACCGATAAAA
GCACTGTACGGGGG
(4334 bp)

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