SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17768c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_speckle_targeted_PIP5K1A-regulated_poly(A)_polymerase_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0031123 P RNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0050265 F RNA uridylyltransferase activity
GO:0071044 P histone mRNA catabolic process
Transcript
Level		FPKM:1.94 TPM:1.90
ORF EntryO_TrvaFAMAMG21789_complete:A_TrvaFAMAMG_TR17768c0_g1_i1
Sequence
(Nucleotide)
CATTCTACTGATACATGATATTTAGGATCTTAATAGTTTGTATTTAAGTTTTCTTTAAAA
TAAATTATTGAATTTTATGAGGTATGTAATAATTCCATGGGTAGCCTGCAACGATAGTCA
TAACCATATGCTTTATTGAAAAACGGGTTAACCGATTTCAAAAATACAAGTGGTTCTTAG
TTGTATTTAAACAGGTCATTCATCCCGTCATAGCACAAGATTACTGGTCTACACTGTATT
TTATTACTTATTAGTAAATACAAATTCAGAGTAAAAACTACAAACAGTCATGATTTATCT
TCTACCACGTTGTGAAAATTTTCCCCTGTTGAAATTATTTTGGTATTTATTAAACTTTTT
ATAGTTTTGCTGATTTTTATTCAAATTGGGATGTAACCGTTTCTTCTGAACTTTGTTATG
AGTAAACCTCATTTTTGTGTTCTCTTGTTTGTCAGCCAGTTCTTCAATATTATTTTCACT
ATCTTCTAGTAAATCACAAAGAAATAAATTTTTATCAACGCAAATATATGATTCTGATGC
TGATTTCATTAAATTAATTATTTTCGTTGCTAATTTGGGGTAGACACCGATGGTACAATT
CCTCGAGTGTTCAAATGGGTCTTGTAAACAGATCTGAGACTCCAACCTTAGAGGTTTGCA
TAATCTATTTCCTAAATTATTTTGATAAGTAGTAAAGTTATTAATGAACAAATCAAAACA
TTTCTTTTGTATTGGATATCCTAGATACGGACAAACAACAAGTTCATCAAAATTGAAATC
AGCATAAAATGTAAAAAAGCCCCCGAGTAAGCGATATAGTGATTCAGTGTTAGAAGTTGT
ATGAGTATAATTGCTGTCAATGGCTGTGTTCCAGTTGTCTACCATATTACAGTCAACATT
TTTTTGTAGAGCCTGAACAGAGGGCAATACAGATTGTTGCTGTAAATAAAAGATAACTAG
CATTGTCAATGCATAGTTTGGCATAAGATTAGTACCAGTTATTTTGAAGACTTTGGACCA
ATATTTGAGTATAACAGCTATTTTGATAGCCCTAGGATCCATGTGCAGCAGATGTGCTAT
AAGTTTACTGTTTTGAACTCCAGAGAAACTCGTAAAGTTGATGTCACAATTGTACCCCGT
AGGTCGATGAAATGTTTTTAATATTGGCACTCTGGCTTTGGTTATTGCAAATAAGTTAGA
GAACAAATGCGGATAGGAGCGTAGTATGTTGCGGGCTTTAATAACAGCTCCGTCTGGTGA
GTTGTATTCCGGTAGTTGTATGTAACAGTCGACATCGCTCGATTTTATGCCGAGGCCCGT
TATTATTGATCCAAACGGTTTTAAATAGCAACCTGGCCAAGGGTATTGTAGAAGTTCTTC
TAAATCTCGAAACAAATGTGTCAAATTTTCTACCTGCTGCCTAGTTAACCTTATATGTTG
TAATATGTTTTCTATTTGCGACTCGAAGTCACCTTTGTCTAAGGACAAGGCGGAAGGATC
TGGCAAACCATCTGTATCCATTGTTAATTTTTAATAGAAAACGATAGAAATTCAACAAAC
AGAAACCAAAATATTAATGTTCGTACAATCCATTTATTTCAATTTTTATTATTTTGCCTG
GCTTCAGAGCATCCACAACCTTATGTTATGAGTAACCAGTAAACAAGAAAAAAACTAATA
ACTACTAAATAAATACAGCCGTAAATATTGTAAATTCTGGAAATATCAG
(1729 bp)

- SilkBase 1999-2023 -