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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17727c3_g1_i15
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(XXV)_chain-like_isoform_X8_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
Transcript
Level		FPKM:1.11 TPM:1.08
ORF EntryO_TrvaFAMAMG21716_complete:A_TrvaFAMAMG_TR17727c3_g1_i15
Sequence
(Nucleotide)
GCGCGCTACCGAATCCACAAACGCCATACTTGCTCTAGAATAATTGGCTAAACCACCAAA
ATTGCGGTAAAAAGTGTCGCGTGTGTCTTAATTAATAATGGATTGGATTGATTAGGAATC
ATGGCAAATCCTAAGAGACAGGAAGGTCGCGAGGAGAATATATTAAACAAAGTGGTGCTC
TGGTGCTGTTGTGGTTTCTTCTTCATTCTTTGTGGTTATGGATTGTATAGGCAGCATTGC
TTGGAGCAGAGAGTGATAGTGCTTGAAGATAAACTGAAGGAGTTGGAGAGGACTGTCCAG
GAGCCAGGGGTGAGTGGAAAGCCTGATCTGCTGCGGAGGGAGAAGAGAGATGCTGACTGC
AATTGTCCAGCAGGTCCTCCCGGGCCGCCAGGGAAGAGAGGGAAGAAAGGGAAAAAAGGA
GATTCAGGGGAACCCGGACCACCGGGCTTGACGGGCGCGCCGGGCAAGAACGGATTCCCG
GGACCGATCGGGTTAGACGGACCAAAGGGAGATCCGGGTCGGCCCGGAGACAAGGGACAG
AAGGGTGAGCACGGCAGTCCAGGGTTCGATGTGTTCTCAGCCGTCAAGGGGCTGCAGGCG
GCCGGACACAACATCTCCGCGCACACTGTCATACAACTCAAGGGTGAACCAGGGGAGCCG
GGACCACCGGGACCCCCCGGACCGCAGGGGGGCGAGGGGCTGCCGGGACATGATGGACGA
GGGGGACCACCGGGACCACCCGGACCGACCGGACCCTCCGGACCGACTGGACCACCGGGA
CCTATTGGACCAATCGGACCATCTGGACCACTTGGACATAAGGGTGACAAGGGCGACAAG
GGCGAGCGAGGGTTCACGACGACGTTAAAGGGCGACTCGTTCCCGACCGGCATCATCGAG
GGACCGCCCGGACCACCTGGACCTCCCGGTCGAACGGGCGAGGTGGGTCCCCGCGGTCCC
CCGGGGGCGGACGGTTCGCCCGGTCTAGCGGGCCTGCCTGGACCTCCCGGGAAACCGGGT
GAGCCGGGACCTAAAGGAACAAAAGGAGAATACGGAGACATGGGGTCGCCGGGCATGTTG
GGAGCACCGGGCCTGCCGGGACCCCCCGGGTACCCTGGACTCAAGGGGGAGAAAGGCGAA
AAAGGAGACTCGAAATACAGAAAGCTGAGAAGGAGGCAGAACTTGCAGGGAGACGCGACC
GGGTACGAGCTCTACGGACACGACATGATGCTGGGACCACCGGGCCCGCCGGGTCCGTCC
GGTCCCCCGGGGGTCGCCGGTCCGCCTGGGATCAAGGGGGACAAGGGAGAACCTGGCATT
CGAGGCAAAGCGGGTGACCGAGGAGAAAAAGGCGACGCCGGACCAATGGGATTACCTGGT
CCGGTGGGTCTCCCCGGGGAGCCGGGGCGCGCGGGGGACGCGGGGACCAGGGGTCCAGTC
GGGAAGCGCGGGCGGAAGGGTGACAAGGGGGACAAGGGGGAGCAGGGGGTGCCGGGGCTG
GACGCGCCCTGCCCGCTCGGACACGACGGCCTGCCGCTACCTGGCTGCGGCTGGAGACCC
AACAAGGACTCGGCGCCGGTGTTACCGCCGCGCGAGGGGACGCACGACGTGCTCTCCGAG
GAGGAGGATGAGGAGGGGGGTGCGGGCGCAGGCGAGGGGGGCGGGGACGGCGGCGAGGGG
GGCGAGTACGACGCGCGGGAGGACGAGCTCGACGCGAACAGGGACTACGACGACTACACG
GAGAACGCACACCTGCCGCATCATCACGACTAACACATTCATACAATCCTCTTTCTTTAG
TTTATACATCGCAATTAATCATTCCTCATTCCCCTTTTTCTGCTGTACTCCTACTGTCCT
TGAACACATACATACACATAGGCTCACAACACACAAAAAGTCATACCTCCAGCTCGCGGG
GTGACTCACAGGACACACTGTCTCTCAAGAGGAGAGGATCTGACAGGAGATCAGTACAAC
TCGCTATCTACAGTAAGGCAGAGGCGATGATGCAGTGGGTGCGACGGAGACTCGACGTCG
ACAACGATCTCCCCGTGTGACCTCCGCGCCGTCCCGCATCGTCCCGCACCGTCCCGCACC
GGACCACCGCGCCGGGGACGCATGCAACTTGAACACCTGCCTGTTTACTATTTAATAACA
TTCATTTACTTTCCTTTCAATAAATTCAAGATTAACGTTAGACGTGTTTTCTTCTTTTTT
AAATACTTTGTGTTACTTTTTGTACACAGTAATGTGGAACGAAGGACCGTGTACAATGAT
GTTTCATAGTATGTCGTTAAGTTATATACTACACGTTACTGATGTCTAGTTACATCTCTT
CATTTGTTGTATGTAGTTAACACTAGGTATAAGAACTGTAAATATTAGATGTAACATAAT
CTATAAGTACTGGTTCACTAGTAATACTTCTATTTCTGAATTTGTCATTCCTTATCTAAT
TATAATATTTATTTAAATTGAATTTTTTATGTAAATAAATTTGTAAGGACTACTGTAATT
TTTGTATTGTAATTTTTGATATCATTTATAGAGTATGATGAAGAAATAAGTACAAATAAT
AATAATGTTGATACTCATAGTACCGGTAGTGTGAGACAGTACTCATTGATACAGGTGGTT
TGTGTGTACATATGAAGTAGTTGTTAATTACTAAATATAACGATGACAATAAACATTCTG
GAACAGTAAAAAAAAAAAAAAAAAAAAAAAACAGTAAGGCAGAGGCGATGATG
(2753 bp)

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