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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17727c3_g1_i14
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha_chain_CG42342-like_isoform_X7_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
Transcript
Level		FPKM:1.07 TPM:1.05
ORF EntryO_TrvaFAMAMG21711_complete:A_TrvaFAMAMG_TR17727c3_g1_i14
Sequence
(Nucleotide)
GCGCGCTACCGAATCCACAAACGCCATACTTGCTCTAGAATAATTGGCTAAACCACCAAA
ATTGCGGTAAAAAGTGTCGCGTGTGTCTTAATTAATAATGGATTGGATTGATTAGGAATC
ATGGCAAATCCTAAGAGACAGGAAGGTCGCGAGGAGAATATATTAAACAAAGTGGTGCTC
TGGTGCTGTTGTGGTTTCTTCTTCATTCTTTGTGGTTATGGATTGTATAGGCAGCATTGC
TTGGAGCAGAGAGTGATAGTGCTTGAAGATAAACTGAAGGAGTTGGAGAGGACTGTCCAG
GAGCCAGGGGTGAGTGGAAAGCCTGATCTGCTGCGGAGGGAGAAGAGAGATGCTGACTGC
AATTGTCCAGCAGGTCCTCCCGGGCCGCCAGGGAAGAGAGGGAAGAAAGGGAAAAAAGGA
GATTCAGGGGAACCCGGACCACCGGGCTTGACGGGCGCGCCGGGCAAGAACGGATTCCCG
GGACCGATCGGGTTAGACGGACCAAAGGGAGATCCGGGTCGGCCCGGAGACAAGGGACAG
AAGGGTGAGCACGGCAGTCCAGGGTTCGATGTGTTCTCAGCCGTCAAGGGGCTGCAGGCG
GCCGGACACAACATCTCCGCGCACACTGTCATACAACTCAAGGGTGAACCAGGGGAGCCG
GGACCACCGGGACCCCCCGGACCGCAGGGGGGCGAGGGGCTGCCGGGACATGATGGACGA
GGGGGACCACCGGGACCACCCGGACCGACCGGACCCTCCGGACCGACTGGACCACCGGGA
CCTATTGGACCAATCGGACCATCTGGACCACTTGGACATAAGGGTGACAAGGGCGACAAG
GGCGAGCGAGGGTTCACGACGACGTTAAAGGGCGACTCGTTCCCGACCGGCATCATCGAG
GGACCGCCCGGACCACCTGGACCTCCCGGTCGAACGGGCGAGGTGGGTCCCCGCGGTCCC
CCGGGGGCGGACGGTTCGCCCGGTCTAGCGGGCCTGCCTGGACCTCCCGGGAAACCGGGT
GAGCCGGGACCTAAAGGAACAAAAGGAGAATACGGAGACATGGGGTCGCCGGGCATGTTG
GGAGCACCGGGCCTGCCGGGACCCCCCGGGTACCCTGGACTCAAGGGGGAGAAAGGCGAA
AAAGGAGACTCGAAATACAGAAAGCTGAGAAGGAGGCAGAACTTGCAGGGAGACGCGACC
GGGTACGAGCTCTACGGACACGACATGATGCTGGGACCACCGGGCCCGCCGGGTCCGTCC
GGTCCCCCGGGGGTCGCCGGTCCGCCTGGGATCAAGGGGGACAAGGGAGAACCTGGCATT
CGAGGCAAAGCGGGTGACCGAGGAGAAAAAGGCGACGCCGGACCAATGGGATTACCTGGT
CCGGTGGGTCTCCCCGGGGAGCCGGGGCGCGCGGGGGACGCGGGGACCAGGGGTCCAGTC
GGGAAGCGCGGGCGGAAGGGTGACAAGGGGGACAAGGGGGAGCAGGGGGTGCCGGGGCTG
GACGCGCCCTGCCCGCTCGGACACGACGGCCTGCCGCTACCTGGCTGCGGCTGGAGACCC
AACAAGGAGGCGATGATGCAGTGGGTGCGACGGAGACTCGACGTCGACAACGATCTCCCC
GTGTGACCTCCGCGCCGTCCCGCATCGTCCCGCACCGTCCCGCACCGGACCACCGCGCCG
GGGACGCATGCAACTTGAACACCTGCCTGTTTACTATTTAATAACATTCATTTACTTTCC
TTTCAATAAATTCAAGATTAACGTTAGACGTGTTTTCTTCTTTTTTAAATACTTTGTGTT
ACTTTTTGTACACAGTAATGTGGAACGAAGGACCGTGTACAATGATGTTTCATAGTATGT
CGTTAAGTTATATACTACACGTTACTGATGTCTAGTTACATCTCTTCATTTGTTGTATGT
AGTTAACACTAGGTATAAGAACTGTAAATATTAGATGTAACATAATCTATAAGTACTGGT
TCACTAGTAATACTTCTATTTCTGAATTTGTCATTCCTTATCTAATTATAATATTTATTT
AAATTGAATTTTTTATGTAAATAAATTTGTAAGGACTACTGTAATTTTTGTATTGTAATT
TTTGATATCATTTATAGAGTATGATGAAGAAATAAGTACAAATAATAATAATGTTGATAC
TCATAGTACCGGTAGTGTGAGACAGTACTCATTGATACAGGTGGTTTGTGTGTACATATG
AAGTAGTTGTTAATTACTAAATATAACGATGACAATAAACATTCTGGAACAGTAAAAAAA
AAAAAAAAAAAAAAAAACAGTAAGGCAGAGGCGATGATG
(2319 bp)

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