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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17718c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Serine/threonine-protein_phosphatase_rdgC_[Papilio_machaon]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005506 F iron ion binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0007601 P visual perception
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0030544 F Hsp70 protein binding
GO:0031435 F mitogen-activated protein kinase kinase kinase binding
GO:0042995 C cell projection
GO:0043405 P regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050906 P detection of stimulus involved in sensory perception
GO:0051879 F Hsp90 protein binding
Transcript
Level		FPKM:0.78 TPM:0.77
ORF EntryO_TrvaFAMAMG21592_3prime_partial:A_TrvaFAMAMG_TR17718c0_g1_i1
Sequence
(Nucleotide)
TTCAGCGACATTTCAGGCTACGATCGTCCCGTTGTCGCGGTCGAACCGGCAACTTTGTGA
AATTTTATTTTAAAGATATGTGATTATTTTCAGTTTTTCTTTTTTTTTCTTTTTGATCGA
GAGTAGCGCCACGCCACGTACATCCAGCCTCCAATATTGGGTGATGTTACTGTATTTAAA
CTTATATCATTAGAGCAACTGCAGCCATTCCTAAGTCCCGTCAAAAAGTTCCAAGATGCA
ATCGAAAGCGAAAAGATAAGAATCATAGGCTTGCGGACAAGAGTCCAACAATGTTTTCGT
TGGCGGAAGGTTGCGGGTGCGTCAGTTTCCGGGGTGGTCGACGCACCCGCTCTCAAGGAG
ATGATTCCTCATCGTGCCGCAGCTCCGAAATAGAACAGGATGTGCCCCAGAAATCGGGCA
AAAGACTCCTCAATGGTGAATGTACCATAAAAGCCTTGGTCCCGTTCTTGAAGTTTTGGA
GAAGAGACGATGTGAGCATGACCAAAGCTGAAAGAACTATGAAGGCAGCCATCTTGATTC
AACAATGGTACAGGCGTTACTTAGCCAGGATGGAAGTTAGGAGGCGTTATACTTGGACAA
TATTCCAGAACATCGA
(616 bp)

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