SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17717c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Sorting_nexin-8_[Papilio_machaon]
Ontology
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0034498 P early endosome to Golgi transport
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
Transcript
Level		FPKM:0.55 TPM:0.54
ORF EntryO_TrvaFAMAMG21583_3prime_partial:A_TrvaFAMAMG_TR17717c0_g1_i1
Sequence
(Nucleotide)
ATTGTGTATTTTCGGTAACTAGAAGTTTTTCATTACGATGGCGTTATAAAAATGAAAATC
CATCTACAATCAATTTTGATGTTTTCAATCGACCTAGACGGCAAGATTGGGACGGGGAAT
TAATTGAATCTGGTGCTTTTTATATCTCTAGAAGAACAATTTTGGAGAAAGGATTATTTC
AAAATAATAATTGTTCTGTGGAGGAAATGACATCAATAGAAAGTTTGGAGGTGGATTCCT
ATAGTGATCTTAAAATCGCTAATGCAATAATAGAAGCGAATATACTAAATTAAAGATATA
CGAAAATCTAAATATGTCTGAACAAACAGAAGTAACTTTCGAAGAGCTTGAAGCAACCGA
TGTTGTGAACGTAGACCTGGTTCCGGAACGAAAAGGAATCATTCTGAAACATTGCGAGTA
TTACGTCAGCTCTCGAAGACATGGAACCACAGTTACAAGGAGATACAATGACTTTGTGCA
GCTTTATGATGTGCTTTTTGCTAAATATCCGTATCGAGCTGTGTGCCAATTACCCCCAAA
ACGCGTGGTAGTAGGTGGAGGGAGTGGACAATTCCTAGAAAGGCGACGAGCTGCTCTCCA
ACGTTGGTTGACATTGGCAGCTCGTCATCCAATGTTGGCCCATGATGCAGATGTACGAGC
ATTCCTATCTGAATCAGTATTGAGGTTGGA
(690 bp)

- SilkBase 1999-2023 -