SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17682c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_longitudinals_lacking_protein,_isoforms_F/I/K/T-like_[Bombyx_mori]
Ontology
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
Transcript
Level		FPKM:18.94 TPM:18.56
ORF EntryO_TrvaFAMAMG21304_complete:A_TrvaFAMAMG_TR17682c1_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTATTTGCTAAAACTATATTTGATATTAACTTCTCTAC
CGAATAAACCCCAATATATGCATATAAAAATCACACTAATCAATTAACTAGTTTCCAATA
ACATTAACAAACAATGTAAAGTTTAACATCCAAATATTCATACATCAGTACCTTAACCGC
TATCATAAAATGATATGACGGAATTATTGCAATTTAATAAATTCTCTATATAAATATAGC
AATGACTCGAATATCAACAACAAAATATATAACTTTCTTTTAAATATATTCTCTTATCAT
CACTTTATAAAACTAATACTGACTTTGGTCAAATAGCTTTGTTTATCCTAGATTAACAAA
AATATCAACAGTCGATATGAATAATTATTGCATGTCAAATATCAGTTTTCATAATAAAAT
ATAGTATCTATGTATAAAATTTTTTGAACACATCCGTTCCCAGTTTCTTTTTTCAAATGT
TACACCAAAATCAACATATACATATAATATAGTATATTTTATAAATCTTTTACATAACTA
CAGGTAACATTGTAGGCACATTAACGATGAGCTTTTAGTTATCTAAATATAACAGATACT
TCAACGAATGCGTCCCTATGTAAATATAATATGATTTTAAACGCAAACGTTTGACGTATC
TGTATGTTATAATCTTAGTAAGGACGTTTCTCCTCCTTAATTATATTAATTAATCTAATA
AATAAACAACATTAAAATAATAAAACTTTGGGTTTGCTACAGAAAACAATTAGGAAGACA
AAGGTAGTGGTCCCCGTATGATAAATTAGAAAACAAAATTAAATAATAAATTATAAACGA
GAATAACAAAAATCGTGACATGATAACTCATTTACGAACTTTGGAAGTAAAGAATAAAAT
TAATTATTATTCTACCCGTGGTGGGAATTATATATCTAACAATGGTAAAATAGAAATCCT
GTTTTAACAGGCGTAACAAGTAAATATCGACTAATTACATCTTAATATCATTGCACTAAA
TAAATTTGGAATTATTCCCATTAAGGAATGGTAGATAATTAAAACTAAACAAATTCGAGT
CGACTGAATGGAATATAATCTTTGTTCCCAAGGCTATTTTAGTTAAATTTTGTTTTGAAT
GTGACTGTTGTGTATAAAACAAATTTGAAGGCAATGTTTATCCAATGTTTTATTTTTGTA
TTGATATTTTTAAAAAATGTATAAATTTAAAACAATGTAATGTATATTTTAAGACTTTGG
GAACGTCGGCTATAGCGAGCTAAAAAGTTTAAAACTCAGTCTTAACTATCGTAATAAACT
TCAAATAAAACAACAGACGACAGTCTACGTTTTCAGGGAATGTGCACGTTGCAACTATTA
ACTAGAATAATTAAAAATGATAATAATTAACGAAAAATAAAAACAAAACTTAATGACATA
ACATAGATAATATAGGATCGCAGGATCGTTTTGGTGCGGGGTCGGGTCTACTTTGGCAGT
TCAGGCCAGCGCCTTCTTGTTGCGGCGCATCTTGTTGGGCGCGTACAGGTACCACTCGGC
CGTGTGGTGCTTGCGGATGTGCACGCCGAGGTTGCCGCGCTGCTTGGCGCGGTAGGCGCA
GTAGGGGCACTGGTGCGCCGGCGCCTTGCCCCCGCACTCCACGTTCTCGTGGCGCCGCAG
CGTGGACTTCCAGCGGTACCGCTTGCCGCAGTGCCGACACTCGAACTGACGCGCCGGCTC
CGCGTGCGGCGAGAGGCCGGCGCCCTCGTCGCTGAGCACGATGTCGTCCGTGTCGTCGTA
CTCCAGCTGCAGCGCGCGCTGCACGCCCAGCAGCGACAGCAGCGCCGGCGGGAGCGCCTT
GCCGCCCTCTTGCTGTTCCCGTGCGTTATCACTCGAATTCAGTATTTCATCTTGAGATCT
TTCCATGTGCCATTGAAAATTGCGCACTACGTCGTTGTGTGAGGGCGGGGGCGCGTCGTC
GTGGTGGTCGTCGTCCAGGGTGAGGTCCTCCAGCGTGTCGGCGCGGGACAGCTCATCCTT
CAGCGCGCCGCTCAGCACCGCCGGCGACGACACCGCGCCGCCGCCGCCGCCGCCGCCCGC
CGGGGCAGGGGACACCGCCCCTCCCGCGGACCCGCGGCGGGCCTTCTTGCGGCGGCGGGA
CGGACTGAGCGACCCCGAGCGGCTGTCTGGGCTTACATCACGACCCAGTGGCACGGGCGA
GAGAGATCTTGGCGGCTGGACGGGTGTGGTGGCGGGGGCGAGGGGGGCGAGGGGCGCGGC
GGGCGCGGGCGGCGCGAGGGGCGCGGGGCGGGAGGGCGGCCGGGAGGGCTTGTTGTCGGA
GAGCCCCTTGATCTGCAGCGACTCGGCCGCCTTCAGCAGAGCCGCGAGCTGGTCCTGCGA
GATGTTCACCTCGCCGCGGTACATGTAGTCCATCATGGCTCGCAGCTCAGCATATTTAAC
GTCTTTTAGTATTATTATTGGATGTTTGTCGTATTGTTGCGATAGTACACTCTCGAAATA
GGGACTGCACGCTGAAAGCACCACTTTGTGCGCCTTGAGTGTTTGTCCTTCTGCTGCCAG
GGTGCAGTCCACATGCATCCCCTTCTCCAGTAGCGTGTCGAACACTGACACCAGCGTCGA
CTGATGGTTGTTCCACCGAAGGCAGAACTGCTGGTCGTCGTCCATTGTGCCCTCTTGCCT
GTCACCGCGCCCACCGGCCCTTGACTATTGCATTAAATGAATTTAAGTATAACACGGTTG
CGTTTTGTTCGTGGTAATTTATTAATTTAACATTTGCACACCCGCCAGCTTTCTTGAGTG
AATGAAAATGAAAACAGAAACAATAAATTCTATGCTATGTTGCAAGTTTAGAGAAAGGCA
CCTCTACAAAAATCCAAACCAAACGAAGTACAAGTTGGAAGCGACGCGAATGACCCAAAA
TAAGCTCTATGAATGTTACCAGTACTAAAAATAAACAATTAGAGCTTATTTAACTTTAAA
CTGCATTTAATCTAAAATTGTCAAAATAAATTTTAAACAAAAAATAATATTCCATTTTTA
AATTATTTTTTGTTTTACAAGTAAAAATATAAAGTGTTTAAAAC
(3104 bp)

- SilkBase 1999-2023 -