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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17676c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_syntaxin-binding_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0017157 P regulation of exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
Transcript
Level		FPKM:1.99 TPM:1.95
ORF EntryO_TrvaFAMAMG21254_complete:A_TrvaFAMAMG_TR17676c0_g1_i3
Sequence
(Nucleotide)
TTTCGGAGGAGTTCAAGTTCGAACACCGTGACACGAGAATTTTATATATTAGATTTGTTT
ACCACAAAATTAAATGAATGTATTTACAACCAATAGTATGAAGTATCTAATTCCTAGCAT
GTCTTGTACTGTCTAGTTAAAACGGTAAATAGCTATGAAAATATATCGAATTAAAACCAC
ATGTGCTTACTGTAATTAAATCTCTGTACGTTTCAACAGTTTATAAACATCTATATATCA
GCTAAAACGGAACTACTTATAATAAAATATTAACGTATTTATATGCTATGTATTTATATA
ACACAGTAGTAACACGATTTTGAGTCGTAATGCTAAGAGCAGAAGGATTATATTTGCAAA
GCTAATCATGTTTATATTTATTATTACATGCAATACAATTAAAATTTGAGTAATTTTACG
AAACTATTGGACTCTGGTTTCGTACAAATTTCAATGAAAATACGTTCAGTATTTGAAATC
GAATTCTCAGATTAATACAGACATTTTCTAATTATTATAACCATTTATATCCTAATAATA
CACAATATAACTTCTAATAGACATTTTTTTTCATTATTGCTAAAGTTAAATAAAGATTAT
TTTGTAGAATGCAACAGAAGTCACTACGTTATCACAAAAGTGTAGATCTAGCAAGTCTAT
AAATAGGTACTAGTTATTTATAGAAATAACTAACACTGGACTTGTAAGATTAAATAGTGA
AAATATACGGAAACAATGAAAAATACATATATATTCAGTTACACTACAGAGAGATTTAAA
CCTAAAATATAAGAGTACTTTGTCTAATCCTTACAATATACAGCGATATACAAGTTGCTT
TAAACAGTTTTACAAAGTTCATTGCTTTTTATATATTTAGCTCTAGTAACACACAGACAC
AACAACGATTGGTCTCGTTAGGCTTGCAACCCCATTCAATATTGCTTTACACTAAGGCGA
TTCAATTTGTAGTTACTATAAATATTTTAAATTATTTGTAGGAAATATAAACAAAATTCT
TCCCTTTAAGAAAGAGATTTATAAAAATAAGTGTCGTGTCGAAGAGAAAATGAAGTGTAT
CGAAGGCTCAAGAATAAATTACGATTGAGAAATAATTTTAACAAAATTATTGTCATCCAA
TGCCTAAATCTTCAATTAATATATTATATTTATTTATATTATTATATTTATTTAATACTT
TATACAGATCAGCACAGGGTGCCATAGTTGACTCGGTCTACATTATTATTCATTTAATTT
TGTATTTATAACATTTACATCTACATTTTATTAATAGCAACAGGTAAATAATCTCAAATT
TACGCAAGTAACTACTAAACCCATTATATTTATTGAAACTTAAATGCAAACTACACAAAT
ATATTATTTTCAAATAGATTCTACTCTCTTTTATCTAGGAGAAAACCTCTTATAAACATT
TTGTGTATAAAATTTAACATTTCAAGACACTACCACAGTTCCTAGATCACTTATAGAGAT
TGAAAACACTACCGTGTGTTTAAAACTATAATTAATATTATATGAATGCAGATTATTTAG
AACGAAGTAACGATCGGAAAACAAAGGAGTCCTACCGTACACTAGCTAGGGTATCGCGAA
CAGTATCTACAATAACAGTTCGTATAAAAAGATTAGCATTATTGCATTCATATGTACATC
ATCGATTAATCCATAGACAACAGATATTATATAAGATTGAACGAATGCAACTGTCATTGT
GACATTGACATTCATAGTGAAGAGACATTTCAAGTATTTACGAATTTCGCGCCCATTTCT
AAACCCAGTGGACAAGAATTAAAACTATAGTTAAAATTATAATTGTATTAGTCTTTTCAA
CTGTTTAAAATTATATTAAAAAAATAACGCAAGTAAAAGTCCACTGCACGGAGCGCATCA
AGGAACAAGTAAGTATAGGCACAGATATAATTGAACGATCGTTCTGTGAGTGCGGTCACT
GGCGCCGCCATGACGCCGCCATGACGCCGGGTTGTGCGTTGGTTCGTGTACAGTACTCCA
CAGCGGTAAGCTCTAAGGGCGGACACTCGCCGGCCGAAGGGAGGGTCAGTTCAGAGTTGG
TACCACTTCTTGTCCTTGTACTTGAGCATGAGCTGGTGCGCGGAGGAGGAGAACTCGGCG
GCCTGGTTGTGCATGCGCTCGGTGCGGTCCTCCAGCTGCGACAGCTTGTCCCCGCGCTCC
ACCACCATCTGGTGAGCGCGCGCCACCTCGGACGCGGCGGTGGAGGCGCGCGCCCCGAGC
TGCTCCACGGCGGCGTTGCCCCCCGGGATGTGCTTGGCGACGGTGCGGCTGCCCTTGCCG
CTGCTCTCGCCGAATAGTTCCTCCCTGTCGAGAGGTCGTGCCCCTCCTCCGAACAGGCCC
CTGAAGAAGCTCTCCTTGGGAGGCTCCGGCATGTCACGTGCCAAGAACACCTCACCCAAC
ATCTCGTTCAATTGATTACAGAATTCAGCGTCGATCGTGAATTTCTGTATTTCGGAAGGC
GACGCGAGGTATAGACCGTGCCCGCGATTACTGAAGCAAAATGTTTTCGCTATCCTGAGC
TCCGAGAGCGGCAGGAAGTCGACGTCGATGAGCGGCCTCAGCGAGGGCAGGCTGTAGGCC
ACCAGGTGACCCGTCGACAGGTAGTTCACCAGGCACACGCTATCTTTCAAGCTGACGATT
TCAGCTTTAACAACAAAGTCAGTTTCGACGATCTGTTGTCTATAGACACAGTTCTGACTA
GGCAGCGCCACCACCCGCGCCTGCTTCTCGCTGGCCACCACCACGAACTGTCTGTCTCCA
CACTCGGCGCCGGCACCAGCCCCGGGCGTGGGGCTCATGCGGCTCCCACACCCGCTACTT
GATGAGCTCTGTTTCGTGGGTGTTCGCTCTCGACGTTCTCGAACATCTTTACTATCATCT
TTCCAACTCTCGTATGAATAAGGAATTAAAGCACCATTGCAGTCGAGAAACGACATCGTT
AATATTGAACCTCTTAACCTAAATATAGGACCACCGCTCGTAGAGACGACCACTGGTTGT
GTGTGCCTGAGGTCCGTCTCCGGGAGGCTGATCATCATCGTGAGCACCGAGCCCAACGTT
GTGCCGATCCATAGCGTGGGCAGTAACGTCGTGGGATCAGACTTCTTAGTGTAGCTATCG
GCGAAGGCGAGGCACTGGATGCCCTCCTGCGATATGTTCTCGAGGCTGGACATGCTGCTG
GACCGAGACCGGGAGAACGAACTATCCAGTTTGTTGAAGCGGCGCATGAGGTTGCCGGCG
AAGGAGGCCTGCTGCTGCGAGGACTGCTTGCGGCGCGGCTCGCGGCCCGCCTCCTGCTTA
CTGTACTTTATGTTCGGCACCGACAACAGCCTCTGATCTCTCTGATCTTTCCTCTCGATC
TCTTCCTTTTTAATCTTCCCTTTCTGTCGAGGAGGCCTCGCGGGTCTGCCGTCTTCTTCG
AACAGAGGCAGGTTGTCGGGTCGAGTCGCCTTCTCCTCTTCAGCAGTGGAGGGAGAGGCG
TCGGTGGAGACGGCGTTCTCATTAGCCTCCTTGTCCTTCCATCGTTCCTGCAACTCCTTG
TGCATCCTGTCGTACACGTCACCAGATCTCTTCTCCTGCAGCTCCTTGTGCATTCTCTCG
AACACATCGGAGCAGACTCGCAGCGGTGACGGGAGGTCACTCTTGTTTTTGTCACTTTCT
TCTTCGTTTTCTACAATTTTATCATCATCTCTTGTTGGCGACTCTGCGCTAGGTTCAGTC
GGAGCATCAGTCTTATCCGTCGCTTCACAATAAAACTGTGAGGTGCTTTTTTCAGTGACG
ACCTCTTCCAAGTTGTTTTCAGTGGGAACGGCGAAGGCAGCCTTGAACTTGAGGTCGACC
TTAGAGAGCTGTCGTTTGAGGTTGAAGTTCTTCCACGAGGTGGACTTCCGTCGCGGGTCG
AGCTTGGGTTTCTCTTCGTGTTGCGGCGGCGGTGGGGGCTGCGGCTGCGGCGCCGGGACG
GGCTCGTCGCTCCCCTCGGGGCTGAGTGCCGGCGAGGGCCGCGGAGTCTCCTCCCCCTCC
AACAAACATCACCATCAACCTAACCATCGCACCACACTGCGTCCTGCCCTCCTCCCGCTC
TCTACTGTCGCCGACCGACCCTCCAATGGTAATCGAGGTGTTCCTAAACGTTAGATCATG
CTTCTGCGAACCTTATAAAAGTGTATAGACAACGAAAGACAGGCTGAGGATAAACAATGA
CTAACGATGCCATGCCGGTTGTCTACGGGTCGAGCGAGGTCAACACTACGGCTAAAACTG
CTATCAAAATAAATAGGAAATCATTAATAACGAAACTGAAAATACAGAGGAAGAGCCGAC
ATGATTCGGACGGCCGTAGCAAATTATTATAAGACAAATAAAAATGCAACTTAAATGTAA
CGTGAAATAATTACATACTTAGTATTGTACTTGGAATTGTACCTAGTACTTGTACTACCT
AGTATTGTAATATCTGTGTACCTGTGTTTGTACCTGGTGTGTGCTGCTGACTCCATCTTG
TGTTATACCGTATTCATAAAATATCATGAATAGATTTGTCTGTATTGTTTTAGATGTTAT
TATTTCTCTCAGTTTATTATTTAAAAGCATAGTGTTTTACCAATACCTTTTCGCCGTGAT
TGTTTTTCAAGTGACTTGTGAAGTTTGTAGCTTATATATTCTATTGTAGTACATATACAC
TCTGAAATTTTATTGTTATTAAAATAATTCCTTTTGTATTAACACTACAAATTTGTATTT
TCATCCGGTTTGAATGATTTTACTTTCTGCTCATATTTCTCTTCATATCTTTCATCAAAT
AAAATGTTTATGTATATTTCCAACACTGATTTTTGTATAAATTGGTTTGTCAGAAAATTA
GTCAAATATTATAATTTTATTTGAGAAATATATTGTTAAACTAAAGAATATTTTAATAAT
TTAGATTCCAGAGCATTTCTGTTACCAGTCTTCACTAAAGTGTCACATAAAAGCACACTC
ATGTGTTTCTAGTATCTAACCTAATTTTCCTAATACTGTGCAACCACAATCGACCTAGTA
TTATACTTAGTATCAATAAGTAACTGTATGTTTCCCTTACCTAATGTATTGTATTTTGTC
TGTTAGTTATTTTAAGGTTAGAATTTTTATAACCTATTCTTAAGAGTGTCAAGCGAAAGA
TTCAGTAACCCGGACCCGACCCATATATTGTCTATGGAATTGATAGACTGCGCAGCTTAT
CTATGGGTTCTGGGATTGGCGCCAATTGGG
(5310 bp)

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