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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17676c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_syntaxin-binding_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
Transcript
Level		FPKM:1.41 TPM:1.38
ORF EntryO_TrvaFAMAMG21245_complete:A_TrvaFAMAMG_TR17676c0_g1_i1
Sequence
(Nucleotide)
TTAATGAATGCTTTTTAAAAAGTAAAACCACTTCTGGTTCATAAAACTATCTGACATCTT
TGTCAAGTGACACTATTACTATTTTAGTTTAATTTAGAATTGTTAATGTCTCTCTTCATT
GATTTCTATTTGAAATGTAGTTTTACTTTGTAGCTATCTCATTTGCGTGTGTGTGTATGT
CTGTGTCCGTATTTCATCATTGTGTTGTGTAATTTATAAGATAGTACATTAATGTAAATT
TTTCGTGTGTGTATGTTTCTGACGATTGAGCTGTGTCATCTGTATGGTAGTACAATTATT
TCACTTCTTCGTGATTTGTATTACAGTAGAGTGTACAGTGTTTCTGATGGTCGTATTATG
AAATTTATATTATTGAATTGTCTCGCTTGTGTATGAGTCTGTGTAATTACCTGATCGAGG
CTGGGCGAGCGTTGTCTCTCGTGTCGCTCGTGCTGGCGGGGCGCGTGGTAGAGCGCGGCG
GGCGACAGCGCGGTCACCACGCACCGTCGTGACATGTCCACCACCACCACGCCACGGTCA
CCGCCCCACGCCATGAGTCCATACGAGGAGTTGAGTGTGAGCGCGGTGATGGCGTGCGGA
GGTCCTTGCTGCAGCGCCACCAGTGCGGGCTGGAACCCCGCCGTGCGCCGCGCTCCCCCC
GTCCCCACCGCACCCCGCACCCGCAGGGAACCCCACCCTCCCCATACACCAGACCTTCTG
TTTTCCCCCTCCACGGAGTCCCCGCCGCGGCTAAACGACATCGACCTCCCCCCCTCCGCC
TCGGGAGACGTCTCCTCTTCTAACGTGTCTGTGATCATCGGAATGTCTATTACGTGTGTC
TCTCCGTGCGTCTCCGTCTTGCGGAACTTGAAGAGCAGCACGTGTCCGTGCGAGAGTGCG
ACGGCGAGCCTGCGCGACTCGGCACACAGCGCCACCTGCTGCGCGGCGAGGGGGGACTCC
TCGCCACACGCGTTGCTTACGGCGCCACGCTCGAACACTTTAGAACATTTAAGTTTATAT
AAAATCTGTAACGTTCCCGCACTCGCGTCCCAAAACTTCACACTACCGTCTGCGTGCCCT
GTAAGTATAATCTCGCTGTAGGAGCAGGAGGCGGGCGCCCACTCTCCGCCGTTAATGGGC
CACAGCTTCTCGCTGAAGCCGGCTGTCTTCTTGTTGCCCTGACGACCCACCGAGTAGAAC
GCAGGGATCAAGTCTGAAGGGCAGTCCGCGAAATACGAGCAGCAAGTGACGGGAGACTCG
TGTATGTCCATGGGGTAGGGATTCTCGAAGCAAGGGTAGCCGGGAGACAGCAGGTCTATC
ACCACCAGGTCGTTTTGGAGGAGTACTACTATCGCGTATGGCTCCTGGTAATCAGCAGTG
TGTGGTGTTTCACACAGCGTGACAAAGTCGACAACGCTGTGTTCCATCTCGAGAACGGTG
GTGCTCTTCCCGTTAAGAACCGTGATGCTGTGTGTCTTCCCCGCCTTGTCCGTTGGCAGA
CCGCCGCTGAAGATTACTAGGCTCTCGCCAGTTTTCGAAGTTTTCCATTCAAGTCTGTGT
ATCGGTTTACATGATTCCAATTTGCCGTCTTTTGTTGCTTTTGCATGTGGATAAGAGACA
CTGGAAGGTCTGGGTCCCCTCGTGGTCCAGGTGGCGAGCGCTCCGTCCACGTGCGCCGTC
ATCAGCTTCCCGTCGTGTTGCCAGGCCGCCGCCCTCACCCCGTCGGCCGGTCCACCTGTC
CCGAGCGACCCTCGCCATTCCGCCGCGCGGGAGCGGAGGTCCCATACCACTAGGAGACCG
GACTCGAAGGCTATTAGCAGTTTACTAGCATCGAGTGGGTTATCACTAATGTCGACCACA
GCTCCGGGGTGATTTGATCTCGTTACTTCAATAGCCTTGTTCCAATTGATGACGTATCCG
GAGAGAGCGAAGGTTTCTATGTTGACGACGTGCACGTTGCCTCGCTCTGTGCCCACGTGG
ATCCACTTGGACTGAAGAGGCAGGTGGAGACATGTGATCCTTTCTCTCTGAAACTTCAGT
GACTGCAGCCGTTGTGGTGACTTCTGCCTGAAGGTCCAGAGATGGAGCTGGTCATCAGCG
GTGGCCGTCACCAGCGCCCCTTCGTTGATGAGGAACTTGGCGTGGAGTACTGCTTCTCCG
ACGTCATGGCGAACGTGGGCATCTACTCCGGGACCTCCTAATATTCTAAGGTTTCCTGTC
TTGTCTCCGATGGCGAGTAGCTTCTGTATGGGGTCCCACGCGAGGGCTGTGGGCGAGAAC
GGGAATCCGTGCCGGAATGTCTTTTTAACTTGGAAGTGCTCGGGGCGCAGCGTCTCCTGT
ATCTCCTGCTCGGTGCCGCGCGGCGCCGCCTGCATGGAGCTGCGGAACCCGTCCAGCACC
CCCTTGAACGTGAACTTCTTCATCGCGAAGTTTCGAGTCGCGGATCCTTTGTCCGAGAGC
CGCTCGCGCCGGCCGCGGCTACATCACAGCCGTCCGCCGCGGACAGCGAGCCGGTTTTGG
CGGAAGGAAGGACCGTCGTGTGATGGCACGCGCCGTCTCTACTGCGCAGGCCGCCCGGGC
CGCCGCCGACGCCGCCACGCGCCCGTCACGCCGACGATCGACGAAAACTAGGCGAGGCAC
CGCCTCCGGAATGTACGGCAATGCGGCTCCAACGAGGATCGATACCGGAGCCGACGATGC
ACACGCGCACTCGCGAGCCGCGATACGCTGTCGCCCAGAGACCGCTCTCGACTGGCCGGA
AAGAGCCAGCGGCGCGCAATCGATGCGCTCGGCCTCGATGCGAAAAGAGATGAACAAATT
ATTGCGTGTGTATATGTGAACCTTGCGGAACTTGAATTCACAGCTGATAACCGAGTGCAG
CCACGTGCGCCACCAGGCGGCGCTCACTATGTCAACACGCCTGACGTGAGCCACATTAGC
CTACCTTTCAGCTGTCAATTGTCACAAG
(2968 bp)

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