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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17670c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pikachurin_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005614 C interstitial matrix
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0019800 P peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0030054 C cell junction
GO:0030198 P extracellular matrix organization
GO:0045202 C synapse
Transcript
Level		FPKM:3.87 TPM:3.79
ORF EntryO_TrvaFAMAMG21217_complete:A_TrvaFAMAMG_TR17670c0_g1_i1
Sequence
(Nucleotide)
GCTAAACTTTGTGGCCGGTTTAAACGGCCAAATTGTACAGCACTAATAGCAACATTCGAG
GTTTCTGAAATTTGAGTGAAAATAAGATGTGAAATTAATGAAGAAAATACTCAAAAAGGT
TAAATACTAAATTGACTAGATTTTCATAAAATGAATTTGAGAATGATAAATTTACAATTT
TTTTTTTCAAACAGTAACAAACAATAGGTTATATGAGAAATTAAATAAACTTAGTCTGAT
AGCCTATGGATTGCCTCCACATTTAATTCTCTCAATTTGATATGTCATTAAAGCGGAGGT
CATTATTGGTCACTTTGGTAAAAATGGCCGTTCGTCAGCTACCAAAAAAAACACAATTCA
GTTTTCATAATACCTCAGTAAATACAAAAAAACTCGATTTTACAAAATATAGCTGACGAA
AAAAAAACTTAACTGCTGACGACTTAAAATATGCTGACGAATAACACAAACGGAAAAAAT
AACCTAAAAATCTGTGAAACTAAAATGTTTAGAAATAGGATCATGAACAGAGTGAAGTTT
TCTGAATTATGCCGATCAATGAATTTAGTGTTAAGTTGCACACATGCACACTACTATAAT
ATGAAAGGTACAGACTAAAAACAGTGAATATCATAGAGAATAAATTTTGAGAAAAACGCA
CTGAAAAGAAAGAAGTACATACGGCCATAGACAAAATATTTTTGACGCCAACTGTTTACT
TTTTTTAAAGTAAGTGTCTGAACTATAAACAAAGATTTGCCTTCTTAAGAGTTCAGAAAA
AAAAGTGATATTCCCTGTTTTTTGTTTATACCCTTCATATTACACACACAAGTCCATTAT
TCATGATCTTATTTCCAATAAAAATATTGCTATTTAAACTTATTATAACCCTTAAGGAGT
GCATCGTCCAACATTGTTTGTGATGGTATGTGGTAGCTTTGACAACGACAGCGGAATGTC
GAAGTCACCGCTCAATGATATTTGGGACACGCAGCCGATCAAACCACTCTTGTATTTACC
GAGGGTGTTTATTTCTATTGATGGTAGGCCTCCAATATAAAGACCATTCTCAGTGTTCAA
CTGCTTATGCTTTCCAGGTGATATTTTACCGACAGAACCTAATCCATCTACTTCTAACAC
ACCAGCTTGTCTGTTTCTTGTAGCCCGAGCTCTATGCCACAACCCATCATCTACTTTAGT
ATGGTTCGCTATAATAACTACCTCTCCGCTACCTAAATCGTATCTGAATACTAAGACGGA
GTTTTCGACGGCAAGCGATAGAAAATCACCGGGCGGCGATATAGGAGACCTCCCGCTCCA
TACAAGCAGACCGTTCGCGGTTACCGAACGAAAACGAATGTTTATATCTAAAGTGTAGCT
TAATAACCTTTTCATAGTTTCATCATCATCTATATGTATAAAACTGTCGACTCCACTAAA
ACTGGGATAAGTGTTCGTATCGCCCCAATTTATTTCATTTGTATTTAAATATTTAACTTG
CATGTAAGTCTCGCCATAACTCGGCCCTTCCGTCGGGACATCATTTAAATGATTGTAGTA
ATCATGTTTTTTGACAAAATACTTCTTTTTCTTGTATTTTTGAACGTGTATATGTTTTTT
TGGCTTCGATTTGTGTGGTTTCATTTTAAAGCCTTTTTTCGCTACTATAGAATGATGGAC
GTCTTCTTCTGATATGTTTTGACTGTATATTGGAATCGGATTAAGTGTCTCTTGACATAG
TTTATTGTTTGTGCACGTATCATTGTGGGGCTCTTCACAATTATCTACATTTAGACCACC
GAGCGCAGATGATACTATTGATAATTCTTCATCGTTTATCACCAACTGTCCAACACATCC
GCTAAAACTCTTCCTCAATGCCAATCTCGGTGGTATTGGATGCGGAGCTCCTCCTAACAA
CATTGGCTGATGCAAAGCCAGTCTCCTGGAAGTACCTCGTGACGTCACCGCCCTGGAGGT
CACCCCGAGGGAGGTCTTCACGCGTAAAGTAGCGTGACGTCCCGAACGACTGACCGATAC
GCGATGCCATTCGTTCGGTTTTAGAGGGAAAGCTGACCTCACAAGAGCAATGCCAGAGCC
CAAGTCAAAAGCGAACTCGACGAAATAATCCCTCAGGTGCAACGAGAAGAAGTCCCCGTC
GCCGCTAGCGTGTTCGGAGTTGTATAGTACCAAGCCATCTCCATTCGTAGGCTTTAGAGT
CACCTGTATGTCTAGCCAAGACTGAGCCGAGTTTCCTAATCCCGGCAGACGAAGATAAGA
AGACCCGTTGAATCGAGGTACCTTCAAATCCAACGTGATTTCACATTTGTCCCCGGCATA
GCCTAACGGACACAAACACACGCCGTTGACGCAACCGCCGCCATGATGACATTCGCAATC
CTCCTTCATCACTTTAACCCCATCACTTTTTACGTCACTCTCATCACCGACCATCACTTT
ATTAATTACAGTATTAGTTTTCACTAGTATTTTTTGGGCATCACCATTTGGGACAGTGTT
ATCCAGAGTGTTATGATCTTGATAGTGACTGGAATCTCTCATCACTAGATCATTGTCTTC
AAAGTGAACAATGTCGTTTATGTCGTAAATGGCTCTTGTTTGAAGGTCGTTGTCATGTTT
TGATATTTCTATTGTTGTGGCTTCGTTCGTCGGCCTCCAAGGCGCTAATGTTGGCGCACA
TTCACCAATATCCAAAGTAGCAACTGAATCTTTGACCAAGCGATAGGTGTCCCCGTTTAT
ACGTAAAAAGTCCACGCATCCGAGCAGACCTTCAGATAGACCCAGTTTGTTTTGAAGACC
TGTTGTATTCCCCGTTCCGCCCAGCCAGACCGGTTCTCGGAACGTCATGCGGGAGAATAG
ACCCTTAGACCTTCCTCTAACTCTCTTCCCATTGTTAAGTCTGAGCCAGGCGTCCCATCT
ATGTCGGTATATTGATATGGTGTTCCACCGACCAAGACGGACCGGTTCTGGAGACCGGAG
GATGCCTGCTCCACTGCCGCAGTCGAACCTCAGTTCAACGTGTCCATTCCTCAGCATGAG
AGCCAGGTAATCCCCAGACAGGTCATCATGTTCTCCCGTCAATAACAGCACGCCACGTGC
GCGTTCAGGACGAACTCGAATACGTGCTCGTACGCGTTTGTACGCACCGCGCAACGCTCG
GAACGCAATCCATGATGAACCGGAAAACCGTGGCGTCGATATGTTTAGTTCTGATTTGCA
CCTTCCAGCGCTATGACAAACGCACTTTCCTTCAGTACATCCATCACAGTTGCAGGCCTC
GACAGCGGCCGTCCATGGAGGTGATCCGGTTCCACCTGGTACCTTTTGCTCCAAACTGGG
TCCAAGCGTCGTAAACTTATCCAGATCTTTTTCCCGTTCATCTTCCGCTATTATATTAAG
ATCAGCTTCACTAATCCCGTCTTCTATCAAACTCCTCAATCCGTCAGCAAGTTTGGATAC
TTCTCCTGTCACCGTGTAATTCTTCTTAACAGCTGGCAGTGTTGAAAGTCTTTTTGATGC
ATCGATATGTTTGTTGCTTATAGTAGCCTTAAATCTATTGGACGGCGCTAACTCTAGTTC
TGCTGAGAAAGATACGTCTTTCTGGTATAAGATGTCTTCTTCGGCATCCAGTGATGCTGT
CGTTGTTCTTGTTGAATTTAGTTCTAGACAGCCATAGCCATCAACGTGGAGTACGTAACC
GGGCCCGCATCCACACTCATAAGTGCCGTCGTGAAGCTCTCTGCAAAGCTGCTCACACGG
GCTGCCTTCGCCGCACCTTCCTTGGAAAGCGGCCTCGAACTGCACTGGTTCCTGGGTTGG
CGCGGGCGCGGTCGCCGGCAGCAGCACAGCTAGCAGTGCCAGCACCGGCGCGACCATCAC
ACCACTACGCCATGCCATCTCCCATGCTCGGTCCCTCCACCGTTAGCTTGGTCTGAACCG
GTGTCGTCCGGGCAAATCCTGTTTGATGGTCACTTGTCACTGCCCAGTTTTTGTCACTAA
CACTGTTCACTAAAGGGGTCCGTCGTGAGGTTGTTGATTCGTTTTTAGGAGTACACGCGA
CGTCGCG
(4087 bp)

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