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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17668c1_g5_i1
Scaffold_id
NCBI non-redundant
(nr)		non-LTR_retrotransposon_CATS_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.17 TPM:1.14
ORF EntryO_TrvaFAMAMG21196_5prime_partial:A_TrvaFAMAMG_TR17668c1_g5_i1
Sequence
(Nucleotide)
CACCGCTGTGGTGGAGCCCATTATACTCTACGCGGCCAGTGCCTGGGAGCCAGCGAGTAG
AAAAAAGACGATGCAGAAGAAACTGTGGACTCTACAGAGGGGCTTTGCACTAAAGATCTG
CAGAGCGTATAGAACAACCTCTTTGCACTCTGCTCTGCTGCTGGCTGGGATACTGCCACT
AGACCTTAGGATCAGAGAAGTAACAATAATGCACAAAGCCAGAAAAGGGGAGCCTATAGA
AGATCTAAAGGATACCAAAATAGAAACAAGAGATCCCTACTGGAAACTCGGTCACCCGGC
ACTGTGGAAAACAATAGAACATCAAAACCTGCACAAACAAGAAGACATAGAAGAAGCTAT
AAGTAAAACAAGCACACAGTATTACACAGACGGCAGTAAAACAAACAATAGAGTGGGTGC
TGCGTACAGTAGATGGAGGGAAGGCCGAGAAACAAGTAACAAAAAAAATCAAGATGTCAC
CACACTGCACTGTATACCAAGCTGAACTACTGGCAATCCTAAAGGCGACGGAAGACATCC
TAAAGGAACCTGCGGTATCCATAGGTGTCTTTAGTGATTCCAGGTCGTCACTTGAAGCAA
TATCCAACATCGGCCTTCTTCATCCCCTCGGAAACCTAATCAAAGATAACATCAAAAAGG
CGGAGGCACAAGGCAAAAGCATCATAATGTACTGGGTCAAGGCCCATGTGGGGACCGAGG
GGAATGAACGGGCTGACGAATTAGCAAAAGACGCTGCTAACAAGAGAACGGTCCCGGGAT
ACGACCTATGCCCAACATCATTTGTAAAACGATGGATTCGTGAAGAATCCATCGACAAAT
GGGATGAAAAATACAGGACCGGAACAACAGCTGAAGGTACCAAAATATTCTTCCCAAATG
CAAAAGATGCATATAAAGTCATAAAACACTTTAAACCAGATGGAATCATTACACAAGCGC
TAACAGGACATGGAGATGTTGGCGCTTATCTCAAAAGGTTTAGGCGTAAACAAGACTCCT
CGTGTGCATGTGATAGAGAAAAAGACGAAACCATCCTACACTTACTGACGGAATGTCCAA
TCTCCGGTTTGGAAAGGTTTGAAACAGAATTGATAATAGGACGTAACATAACACGAGAAA
ACCTACAAGAGATATTTCAGAGAAAAGAAGAGAGAGAAATATTTGTAAAATTTATTACTA
AGATACTTAAAGTTGTTATAAATAGAAATAAGTAATAATAATAGGCAGTAGCAGGCTAAA
ATATTTGGACCTGGCCTACGAGGTGATCGACATGTGGCGTGTTGAATCGACCATCATTGT
TCCGATCGTTGT
(1332 bp)

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