SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17663c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_flap_endonuclease_GEN_isoform_X3_[Bombyx_mori]
Ontology
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.99 TPM:1.95
ORF EntryO_TrvaFAMAMG21169_complete:A_TrvaFAMAMG_TR17663c1_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTAGTTTTATTCTTTAATACGTATAACACTTAATTACCATATTTCGGG
CAAACTATAATCTTCAGTCTTATCACAATCCACAATAATAGCACTTTTATGTTTATAATC
AAGAGACATTTCGAAAGCATCTCGTTCATCAGTAAGTTTATCGAAAAAAATAACTCGTAT
TTAATTTAGAATTCATTGAAACATTAAAAGTATTTCTGTTCTTAGCTCTCACGGGACTAT
CTTTCGGAGTGGAACAATTGTTCTGTATATCACTCAGAACGGCTTTTCGTAAACTCAGTT
TCTTTGGCGTTGAATATTTATCGAACACAAGTTTGAACACTTTATTGTCGACTTTTGCTG
TTTCTACGATCGGTGACCTTGATATTATGTCTTCGATTATTCCAGATAAATCGCTTTCGC
AATCTTCATCGGATTTATTTAATATACTGAAGCAGCTTTCATTATCATATTTATCTTCTT
TCAAACAATTCCTACTTATTGAAAGATTCTTAAAGCTACGTCTTGTACTGTTTATCAAAC
TACTACGCAATTTCATTTTCTTTGCGATAAAGCTGTCCATCGTTTTCTGTGTTGACTTTT
TCGTGTTTTTCAATTTCCTTTTTAATTTATTCACTGAAACGCTCACGTTCAACTTGCTCG
AGTTCAATTCAACTTTCGAATGTTTGTTGGACTCGTTTAGCAACAAAACATCAACATGAT
TTTTGGGTTTTCTGTTATAACGTCGTTTTGGTTTATTCGGTTCTACATTTTCTTTTTCTT
CTTTATTCTTTTTGGTTTTAGTTTTCTTTATTTTAGGTGGTTTTTTTATAGACTCTTCAA
ATTCTTCCACTATTTTCGGGTAAAACTGTCTCATCAAATCTTGCCGTTCGGTCGTAGTCC
AAGCGACTATGTGATCTTCGCATTCATCAAACTGGTCATCAGGAATTAGCGCCTCATATT
CACCATTGATATCACCCCAAGCCACTTCAAAACTAGGAACACCACGCGGATTTCTTTTTT
TCTTAATATAAAGTGGTCGAATAGTTCTAGATGACACATTTTTTTGTAAATGAAATTTGG
TCAGTAACGGCAAGAATTTCTCGACGCAATACTTCTCTGTCCAGTCCAATTTTTTTTTCA
TCAATTTCGTAAACTGTATCAGACTCGGAACCGGTGTTTTCAAGCTGTCGATGTTTATTT
TTTCAACGTTCGGTTTCAAAAACTCTTTCATAACTCTCGGCTCGGGGAACAGAATGCCGC
ACGAGAGAGCCCGGCTGCGAAGTGACAACTCCCGTTTCACTTCCGCTACTTTCGACTTGT
GTCCAAGATCGTTGCATCCTCGGTCGGTCGCACAAACTGGACAGCCGTTTCTGAGGTGCG
TGCGTCCGACGTGACCGCACCGGTCGCACCGGCCCGGCACACACGACCAGCGGGCTTGCT
TCTCGTAGCTATCCGGATCAGACACCCACGATAGTAACCTGGGAATCACGTCGTTTTCAG
GCACAGTGTGCAGAAATTGTATAGCTGTTGTTATAGAGGAGCCACATGCTCCAACGACGT
AATCACAACCACATAGCAATGCAAGTGCAACCATTTTGTTTCGACCGAAACCATTGGACT
GAAATAGTTTTTCAGCATCATAGCAGTCGACTGAGCCCTGCATCGCTCCTCCTCCGGCCG
AACTCGAAACGCTAAAGTTTCGATACACTCGCTTCGCACCGTAAGCGAAACAATCTGAAT
CTTGTGACACTACTGCATCAACAAACTGTATCAAACGTTACAAGACTTTTGAGCTTAATG
ATAAATTACCATAGAATTCTTATATCTGGAATCAACTTCATGAACAACAGAATGAAGCCA
ATTGAAAGTACACCAATCG
(1879 bp)

- SilkBase 1999-2023 -