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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17660c0_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_alanine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016597 F amino acid binding
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0019233 P sensory perception of pain
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.78 TPM:2.72
ORF EntryO_TrvaFAMAMG21154_complete:A_TrvaFAMAMG_TR17660c0_g2_i3
Sequence
(Nucleotide)
GAAAAATAAAACTGCTCAGCTGGTTTGAGAAATCGCAATTTTTATTTTCTATTTATTTTG
TAAACCAATTACGTTAATAACTATTACACATCTAACTCTAACTTTCCGTTATTTCAAGGT
TTCTAGATTGTCTTAAATGAACCTCACGGAGTAAATTAACGTACAAACTTTACAGTTAAA
AAATGTTACGTATACCGGTTAGAAAAAACAACTTTTACCGTAATTTTACGCGAACCAAGT
CTTCCAGTAGCATTCGAAACACATTTATAGAGTATTTCGTTGATAAACATGCTCATAAGT
TCGTTAAATCTAGTTCCGTTGTGCCGCTATGTGACCCGACAGTTCCATTTGTGAATGCTG
GTATGAACCAATTCAAAGGAGTATTTCTCGGGACAGTAGATGCTCCGTGCCCCAGAGCTG
TTAATTCTCAGAAATGCATCAGGGTCGGTGGGAAGCATAATGATCTGGACGTAGTAGGTA
CTGATGGACATCATCACACATTCTTTGAGATGTTGGGAAACTGGTCATTTGGTGATTATT
ATAAGAAAGAAGCATGTCAAATGGCATGGGACTTACTCCTCGGTCCGTACAGACTCAAGC
CCGATGACTTAGTTGTTACATACTTCGGAGGAGATGATATCATTGGACTGAAAGAAGATC
GAGAATGTAGAGACATATGGAGTTCTTTAGGAGTACCTCCAAGTCGTCTGAAAGCCCTCA
GTGCAGCTGATAACTTCTGGGAGATGGGGTTGACTGGACCATGTGGTCCGTGCACTGAGA
TCCACTATATCAATCCTGATGGCAGCCTCACTGAGATATGGAACCTGGTGTTTATACAGT
GTAATAGGGAATCAGACGGCTCAGTGACTACCTTATCCCTTCAACATGTGGACACCGGTA
TGGGTCTGGAGCGAATGGCGACATTACTACAAGGGGTGCCGTCTAATTACGACACAGATC
TCTTCAAACCCATCATCAGGGCCATTGAGAAGAATAGTAAGAATGTATCAGCGTATAGTG
GTCAGTATTCCGATAGCTCAGTGTTAGATCGTGCTTACCGACGTCTAGCTGACCACTCGC
GGATGATCAGCATTTGTTTAGCTGACGGAGCCTTCCCTTCTACCAGCTTAAACGTAAAGC
AAATAATGCGAAAATCGTTCAAAATAAGCACAGATATTTTCAACAATCCAAATTTGCTCC
TAAATCTATATGATGAGGTGGTTTCAACCTTAGGGTCTACCTACCCTGAGCTGATCAGCA
ATGAATCCAATGCTAAAATCATAATTGAACATGAGAGTCAGGCCTATGCCAAGATGAGGG
CTGGCCTGGTCAAGAAATGGAAGGATCTGGTTATGAGGTACCCTGAAGTTGAGGGTCTGA
ATGATGTGGAGACTCCAGGGTTCGCTTTGGGATATAAAGAGTTTAAGGAGTCCATGTCAA
AAATGAACACTTCTACAATACCAGGAGAAGTCATATTTAAACTGTATGATACTCACGGCT
TACAAGAAGATCTAATAGAGAGAATAGCGAAACTAAACCACTTGACCACAGACAAAGATG
GCTTCCAGAAACTACTGTCGAACCATAGACAACGACACAAAACTTCCTTCAAAGAACAAA
ATACAAACAAATCATTTAATGATACAATAAACAAATTAATTAAAAATGGTGTTAGTAAAA
CTAATGACAGTTACAAATATAATTACGAAATTAAAAGTAATAATTTGGAATTTAGGAGTT
TGAAAACAAAGTTAGCCGCCATTTTGGATGAAGACTGTGAATGGATAGAATATTTAGATA
CAACAGAAAATAAACCGTATTACATAGTGACAGAAGACACAAATTTCTATTGCGAAGAAG
GCGGACAGATCTCCGACACAGGTGTCGCGAGGATCGACAAATCGACTTTTAAAATCGATA
GTGTTTTCAAAATTAGAGATTACGTGTTCCACAAAGGCAGTTTTGTCGATAACAGTGTTA
GTGTAAAACGCGGTAGTGATGTGACATTAGTTATCGATAACGAGAAACGGCTAAGGACTA
TACAGAATCATACAGCAATACATCTTTTAAATGCAGCTATCAGGAAAGCCTTGCCGAATA
GTGTGATCAGTCAAATCGGTTCAAAAGTGACAGATAGGGGACTCAGTTTAAATTTGTCGG
TTTACGGGGAGAAGATATCGCAGGATGTGGTTTTGGAAGCCGAGAAAATGATTAGGGAAT
CAATAGAATCAAACGTTAAGGTCCAAACGAGGATATTAGACAGTGTTCAGCTGTCATCTG
AAGATTCAGTGTTGACAGTACCGGGGGAAACTTACCCAGAAACTGGATTGAGACTGGTCG
CTATAGGATCGCCTTTGGTCTCCAATGTACAACAGGGAGTTGTGTTGCGGCACCCACGCG
CCCTCCACCGGCGCCCTGCGCGACTTGTGTGTCACCAGCGTGAAGAGAGCCAGGACTAAC
GCTCCTGTTGTCTATGCTCTTACTGGAGATTATGCTAAGCAGGCGAGAGAACTATTCTGT
CGTACGAAGAAATTGAACGAAGTTATAGATCTAGTCGATCCCGAGAGACGAAAGGAAGAG
GTTTCTAACATTAAACGCGAACTCATTGAACTGTGCGGAAACAATGGCGCCCCACATGGT
GAATACGCACAGTGTCTAGCTCAACTAGACGATATGATGAAACGACCTGTCGATACTAAC
GAAATGGCTTTACAAGCCATCGCAGAAACAGAGATCCGCGAGTTGTTCGTTGAAGCGGCG
TCGAGTGGCCGCAAGTTCGTGGTGCAGTTCATCCGGTGCTCGTACCTCATGCAGGGCGCC
GCGCTGGGCAGGGTGCTTCG
(2840 bp)

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