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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17660c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_alanine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016597 F amino acid binding
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0019233 P sensory perception of pain
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.66 TPM:1.63
ORF EntryO_TrvaFAMAMG21152_complete:A_TrvaFAMAMG_TR17660c0_g2_i2
Sequence
(Nucleotide)
CTCTCACGGACTTTTTTTTTTATCAATATTGTTTACACTATAAAATTGTTTTAGAAAGAA
GCATGTCAAATGGCATGGGACTTACTCCTCGGTCCGTACAGACTCAAGCCCGATGACTTA
GTTGTTACATACTTCGGAGGAGATGATATCATTGGACTGAAAGAAGATCGAGAATGTAGA
GACATATGGAGTTCTTTAGGAGTACCTCCAAGTCGTCTGAAAGCCCTCAGTGCAGCTGAT
AACTTCTGGGAGATGGGGTTGACTGGACCATGTGGTCCGTGCACTGAGATCCACTATATC
AATCCTGATGGCAGCCTCACTGAGATATGGAACCTGGTGTTTATACAGTGTAATAGGGAA
TCAGACGGCTCAGTGACTACCTTATCCCTTCAACATGTGGACACCGGTATGGGTCTGGAG
CGAATGGCGACATTACTACAAGGGGTGCCGTCTAATTACGACACAGATCTCTTCAAACCC
ATCATCAGGGCCATTGAGAAGAATAGTAAGAATGTATCAGCGTATAGTGGTCAGTATTCC
GATAGCTCAGTGTTAGATCGTGCTTACCGACGTCTAGCTGACCACTCGCGGATGATCAGC
ATTTGTTTAGCTGACGGAGCCTTCCCTTCTACCAGCTTAAACGTAAAGCAAATAATGCGA
AAATCGTTCAAAATAAGCACAGATATTTTCAACAATCCAAATTTGCTCCTAAATCTATAT
GATGAGGTGGTTTCAACCTTAGGGTCTACCTACCCTGAGCTGATCAGCAATGAATCCAAT
GCTAAAATCATAATTGAACATGAGAGTCAGGCCTATGCCAAGATGAGGGCTGGCCTGGTC
AAGAAATGGAAGGATCTGGTTATGAGGTACCCTGAAGTTGAGGGTCTGAATGATGTGGAG
ACTCCAGGGTTCGCTTTGGGATATAAAGAGTTTAAGGAGTCCATGTCAAAAATGAACACT
TCTACAATACCAGGAGAAGTCATATTTAAACTGTATGATACTCACGGCTTACAAGAAGAT
CTAATAGAGAGAATAGCGAAACTAAACCACTTGACCACAGACAAAGATGGCTTCCAGAAA
CTACTGTCGAACCATAGACAACGACACAAAACTTCCTTCAAAGAACAAAATACAAACAAA
TCATTTAATGATACAATAAACAAATTAATTAAAAATGGTGTTAGTAAAACTAATGACAGT
TACAAATATAATTACGAAATTAAAAGTAATAATTTGGAATTTAGGAGTTTGAAAACAAAG
TTAGCCGCCATTTTGGATGAAGACTGTGAATGGATAGAATATTTAGATACAACAGAAAAT
AAACCGTATTACATAGTGACAGAAGACACAAATTTCTATTGCGAAGAAGGCGGACAGATC
TCCGACACAGGTGTCGCGAGGATCGACAAATCGACTTTTAAAATCGATAGTGTTTTCAAA
ATTAGAGATTACGTGTTCCACAAAGGCAGTTTTGTCGATAACAGTGTTAGTGTAAAACGC
GGTAGTGATGTGACATTAGTTATCGATAACGAGAAACGGCTAAGGACTATACAGAATCAT
ACAGCAATACATCTTTTAAATGCAGCTATCAGGAAAGCCTTGCCGAATAGTGTGATCAGT
CAAATCGGTTCAAAAGTGACAGATAGGGGACTCAGTTTAAATTTGTCGGTTTACGGGGAG
AAGATATCGCAGGATGTGGTTTTGGAAGCCGAGAAAATGATTAGGGAATCAATAGAATCA
AACGTTAAGGTCCAAACGAGGATATTAGACAGTGTTCAGCTGTCATCTGAAGATTCAGTG
TTGACAGTACCGGGGGAAACTTACCCAGAAACTGGATTGAGACTGGTCGCTATAGGATCG
CCTTTGGTCTCCAATGTACAACAGGGAGTTGTGTTGCGGCACCCACGCGCCCTCCACCGG
CGCCCTGCGCGACTTGTGTGTCACCAGCGTGAAGAGAGCCAGGACTAACGCTCCTGTTGT
CTATGCTCTTACTGGAGATTATGCTAAGCAGGCGAGAGAACTATTCTGTCGTACGAAGAA
ATTGAACGAAGTTATAGATCTAGTCGATCCCGAGAGACGAAAGGAAGAGGTTTCTAACAT
TAAACGCGAACTCATTGAACTGTGCGGAAACAATGGCGCCCCACATGGTGAATACGCACA
GTGTCTAGCTCAACTAGACGATATGATGAAACGACCTGTCGATACTAACGAAATGGCTTT
ACAAGCCATCGCAGAAACAGAGATCCGCGAGTTGTTCGTTGAAGCGGCGTCGAGTGGCCG
CAAGTTCGTGGTGCAGTTCATCCGGTGCTCGTACCTCATGCAGGGCGCCGCGCTGGGCAG
GGTGCTTCG
(2349 bp)

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