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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17659c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		Nep1_protein_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
Transcript
Level		FPKM:3.45 TPM:3.38
ORF EntryO_TrvaFAMAMG21149_complete:A_TrvaFAMAMG_TR17659c0_g1_i2
Sequence
(Nucleotide)
TTTTTGAATAAAATATGTTTTATTTATCAAAAATATTTATTACTCTACTCCCCAAACCTC
CTCAAAAGCTGAACACAGTTTAGCACATGTTAGTGCTGCTGATAAGGGATAATTACTAAT
TGATATTACATCTTCTGAATAATCCACCTCAACTTTTCCATGTGCCATAGCTCCTATGAC
CATCACAATCGGTTCATCTTTAGGTACAAGCTCTCTGCAGTTCTGAACTACTTTTGAGCT
GAAGGACATAGTTATTTTCTTAGCTCCAACTGGCAAATGTGATGTTACAGGATTCTTGAT
AACTTTTAAAAGCTTCATTGGTCCATCTGATGCTCTGATTGCAAACTTGTGCAGAAGTTG
AACCATTAATCCTGCAAATCGCTTAAATGTTCTAGGTATTCTAGTCTGTGGATTAATTTC
AATCAATACATTTTTTTCCGTGTGTATATAGACTTGCAGTAAACCAGCTCTGTTCAAAGG
AGAGTCCATCAACATAAGCAGTGACTGATGAGTGATATCAGGCCTGCAGGATCCAGGATC
ACGGTCATTTTTGCGTAAAATATGGGCATGATCATCACAGTTCAATAATTCAAAACTATT
ACCATTTTTGACGCTTTCTAACTGTGCATTTTCTAATATTACTATAAGACGTTTTTCTTG
TTTCTTAATATGTGAAGTAACCAAATGTTTAGGTATTGGATCGAATTCAAAATCGTCATC
TTTAGAAGCAAGTTTTCTCTTTTTGCCCATGTTCAAAATAACCTATAATAACGTAACTAC
GATGTTATCGTACACTATTTTATAAAAGCTTATATAAAAATACATGTAATATTTACATTT
AATGTTAGAACATCGATATTTCCTTTCAAAATCTTTTGATTTTATTCATAATAATTTGAA
CGGAATAAACAAAACATTAATTTCCGTTCCACGTGCTTCTTGACAGTTGACTATCTTGAC
ACTTGACGTTTGATGCAGCAGAACATTTGACATTTACACTGAACACGACTCATCCGTTCC
AACCTTTTTTGCTCAAGAACACAAGTCCAATCAAACTGTAG
(1061 bp)

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