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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17657c0_g2_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X1_[Papilio_polytes]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:0.41 TPM:0.40
ORF EntryO_TrvaFAMAMG21133_complete:A_TrvaFAMAMG_TR17657c0_g2_i4
Sequence
(Nucleotide)
TAATCACCTTGCGATTGTAAACAATCAAGACTAAGCCAACTTTCTGTGTGGTGATTGCCA
AGCACAAACGTGAAACAGTTGCAGTCATCCTACTAGATTTTAAATAAAGAATAATATTTT
ACTTTATGTTGTAAATGGACCGTCATAATAAATCAAAGTCTGTGCACATATTGGAATGGA
GTGTTCACAAATTGTTTCCGAAGACCATGATAGATCATACAAACTCTACACCATGTATAA
GAGACCAGAAAATCTTGAAGTACCCTTGTCCGTTCCTCGTGACGTCAAGAATAGTGTGTA
CGCCATGAATGATCAGACTTTTCACACACCCTCATTTGGCGACGAAGAATTTGACATTCC
TTTAATTCATGGACAGCATGCTCCAGGGTCCGGAGTCACAAATACGCATATTCAGTATAC
ACAATTACACCACGCAGCACCACAGGTAGGTATGATGAACCCAGCACAAGACGGTTTGGC
ACCACCGGGAGGTGCTCCTTCATATCAACAACCACTATATTTACAAGAACCACATACACC
TGTCACAACACACAGTGGAGCTGGTGCTCCGGCAGGGAATTACATGATTCAACAACAGCC
TGGAGGACAACAGAGGTTGTTGATAATGCAGCCAGCACAAACTATAAGTGGACCACCTAC
CCCAAGCACTCCAACTCAACCATCAGGGCCAGTGTATGGTTCTCCACAAAGGGCATCACC
ACCTGGAACCACAAGTGATGACTCAGACGATAGTGTACCTTCACAGCACTCACAGTTGCC
TGGTGATGCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGAGCCGGCAGCAACAAAC
TACGCTTCATCAGATTGGTGTCGCTAACATGGCTGTTAAAAGAACATCACCTGATCCCAT
GGAAAGTGGAATGAACCGTGGACAAATACAGAAGAAGCCTAAGGTTCAGAAAAAAAAGAA
AAAACGTGATCCAAATGAACCTCAAAAGCCAGTGTCAGCTTATGCATTATTCTTTAGAGA
CACTCAGGCTGCAATTAAGGGCCAAAACCCAAATGCTAGTTTTGGAGAGGTTTCTAAAAT
AGTTGCATCAATGTGGGATGGATTAGATTCAGAGCACAAAAGTGTTTATAAGCAGAAAAC
AGAAATAGCAAAAAAGGAATATTTAAAGGCACTTGCTGCCTACAGAGCCAGTCTAGTGTC
AAAGGGAGGAGAACAAGAGAATCAAGCTATGTATAACCACAACAACAGTGGCAATGTTTG
TGGAGGCAACAATAGTGCCACATATGGTAACTATTACCAAGGACAGCCTTATGGCAATGG
CCACTCTCCTCAGAACTATGTACAAAATACTACGCCTCAAGGATACTCCCCGCAGAATTA
TCCTGCTGGTCAGCCTCAAGCTTCATACCCTGGGCAGCCTGCACAACAATATCCACCTAA
CTCTCAAACTCCTCAAAATTACCAAGGGAACATGCCAATCCCTCAAACCTACCAGAATGT
TCCAGCACCATCACCTCAGAGCTATCAAATAAGCTCTTCAACGTCACCTCCAAATTGTCA
ACCAAATGTAGCGCAGTCTCCTAGAAACTATCAACCAACACCCTCACCAACCAATTACCC
TGCAAGTTCATCAATGTCACCGCCAGGGTACAGACAAGTACAAGCTCAATCCCCACCAAT
GGGAGCAGTACATCCTGGCATACAATATCACCCTCAACAGCAGATGCAAACAACACACAC
ACAGATGCAACAGACACAGGTACACCAAGTTCAATACCAACAACAACAGCAATCTCAACA
ACAACAACAGCAGCAACAAATGCTGCAACAACAACAAAATCAACAACAACCGATTTTACA
ACAAAGTCAGCAACAGCAACTGCTGCATCAACAGAATCAACAGATGATGCAACAGCAAGC
CAAGCAGACACAAAATCAGCAACAACAACCACAGCAACAACAATGTCAACAACCGCCATT
ACAGCCTGTTAAATCGGAACAAAACACACCACCCACTAGTAATGGACATCCTCAAAAAAC
AACAGAACAAAATGAAAAGAGGAGTAACCCTTGTATTCGTCAGGGCTGTACTAATCCAGC
AATATCAAACAGCGAATGGGAAGATGAGTACTGCTCTAATGAGTGTGTAGTCAGCCATTG
CAGGGATGTCTTTAGTTCTTGGGTGGCATCAAACAACAGCAATCAAATGCAAAATTTTTC
AGCAGTTAAATAAACATATCATGTAGAATTTTAATGCTAGTTGGCCATGATCCTACTTGG
AGTTCCATTGTTAAAGTACAGCCACTAATAGACATTTAAATCAAACTGTAATAATACTTA
TGATTAGAAATAGTATTAAATATTAATTTGTATACTATACTCATTTAGTGGTTAGTGGGC
GAAATAGTAGTTGTGTCATTACTTTTGAAATTTAGAATCATGATATGCACAAAATATAGA
AGGATAAATTATAACACGTGATTAGAAACTATAGTGTACTTCATGCCATATTATTATGTT
TCAGTAACTAAATAACTTCATAATTTGTTAAGCATATCATGATTAGTTTCGTTAAATAAG
GGTACTATGATTATAAAAAAGAAAGCAATAATTTCAGCCTTGAATTTGTATGAAATTAAA
CCTCCATACAGTAATCGTTAATATTATTATGTAGAATTAAAGTAATTGTAAATAAATTAT
TTTAAGCTTTATATAATTATAGTTGCAAATTAGACAATTGTAACTTATTGTTATGATCAC
AGAAATTGTATTATGTTACTAGTTTTAGTATAGTTACACGTTATTTTTTAATACTGGGTG
GAAAATAAACATTTTGTTT
(2839 bp)

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