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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17656c1_g4_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vacuolar_protein_sorting-associated_protein_13A-like_[Bombyx_mori]
Ontology
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006895 P Golgi to endosome transport
GO:0007005 P mitochondrion organization
GO:0019898 C extrinsic component of membrane
GO:0042593 P glucose homeostasis
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:3.29 TPM:3.22
ORF EntryO_TrvaFAMAMG21121_5prime_partial:A_TrvaFAMAMG_TR17656c1_g4_i1
Sequence
(Nucleotide)
AGTTTCGCCATCTAGCGAATAGTGACGTTCCCAGTTGAGTGGTTAATTAATCTTAGAAAT
GAAATCCATTAATTAATACCGGTGTCAATAATTTTACCACATTACAATATGTTTGAGTGT
AAAAATAGCGTTTTATTTTTGTAATGTATCAAAATGGCGTCTACTCAGTACATCTCTTGT
CTTCGAGTGCCATGATGAGGGCGCATTGTATTTTAGCCGCGAGCCACTTGAGAAGCTCGG
GATCAGAAATTTGTATAACTTTCTCGTCCGTTGAGAAGTAGTTTATGAGTTCGTCCTGTT
TGACGGTAAGTATGATCTTGTCTTTGTCTATGGCAGGCGGCGCGGTCAGCTGGTCGAGGG
TGACCGTCCACTCCACCTGCCACGACCCACTGGATCCACCGCCACGGACCATGTACACCT
CAGTGGTAGTAAGTAGCACGGTACAGTTGGATCTGTCCGGTATGTGTGCGTGCGCGACGT
ACGCGTGCGTGCTGGCGTGCGGACACACGCCGCGGGCGAGCTGCGCGCCGAGCGACGCGT
GGCGCGAGTACGGACGGACGCCCTCAACCGGTGAGCAGTATCTCGGGATCCTCATCCTGG
GCACCAGTCGTCCCCCGCTCCTCTCGACGCACGACTTGAGCGCGTGCATCGCTCCGTCCA
TACACACCTGACGAGAGAGGGACGCCCGGCTCGCTTCACGGCATATATTTTGTAACATAA
CATAGTCTTCATCGAACGATGGTTTAGCGACGAGTGCGGTGAGAGCTAACGCGACGCTGG
CTGAGTTGTTAGCGTCGCTTGATACCACACTTGATGGTAAGTCGTTACTTACGGATTGAT
CACCTATTCGTCTCTTATTATGCTGTGGTCGCGGCATGTCCTCGAGAGTGATGGTGGTCT
TGTTGGCGGAGTTCACGGTCTGACCGAGCATCGAAGACACGGTCTCTTCCAGGTGTTGGG
ATATCATTAGGGATTTCTTTATCGCTGTGCCCATATAAGGTTCATAGTAGTCCGCATCAC
TAGTGGCCTCCGTACACAATGGCGAGCGCGCGAACGGGTTCCCGAGCACGCTCAGCCCCA
GCACGAGCACGTGGAACTGTTGCACGAGCTGCTGCCAATAATGGCGCTGAGCTACTGATA
TTAGACACGAACCAGATATGGGCGCGTTTTGTACTTCCAAATATGACATCCTTAAAACAA
CATCCTTCATATCACAAAGCGAAGAGCCCCACGAATTAAACAAATATTCCAAAAGATCAC
TATTGAACAACTTAGGCCGATTCTCCTTCTTACTCCCCAGTTTCATTTGCTCAGGAGTAG
TACTATACTCTGCTAGATATCCTCTAGAAGATAGACTCAAAGCTATCTTCACTGGAGACA
GATGGACATATTCAAAGACTATGTTCTTCTGGCTGCTGTTCTGTGACTTGGCTGCTATGA
TAGGTATCGGCATGTGCACTAGAGCAAGATCTGCCCTCAGCCTCACAGCTGGCTTCTCCT
CAACTTTCCAATGATTTAGTAAATCAAATACGTAGTTCACGAATCCTCTGTCCAAATTCA
CGCAGTACTCTTGAAGAATGACCTTCAAGTATTTGTATACATCCTGGTTTAGTGATGGTC
TGTGCTGTTTTAGGGCTACGATCTCTAAGCATGGTTTGAGTTGGTTCGCCTTCAAGTCTG
GCGGTAATGGCGCCGGGCAGAGTACAGTCGGGAACACAGCTTCCGACAGCTGATTGTCGA
TCTGTATCCTCTGGCATTTCAAGTGTAAATACGAGTATGTATCAGACTTTCGATACTGCA
ACCACATGCCAGGGTTGTACGTGCGCTTCAACTCAGCAAAGAACGGTTTCGTCATCTGCA
TCTTTTCCAAATCTAAGTGTATGTATTCTTTTAGTTCGCATTTCTTCTGGTTGTTGGTGT
ATTTGTCTTCAATCCACGCTGTCAGGTCTGGTGATAGTTGCTTCCATTTGTGACTGACGT
TGACTTCCCATCGCGGCAAAGTATCTGTGACGCTCACATACGTTAGTTCTTTGACTCCGT
GAGTGCTTTGCACACAGACAGACAAACTGACTCCAGAAAGAGACATGTAGATCTCATAAT
TGCTGTTTTCAGCGTTGATTCTCATCTTGTACTGATACGCGATTCTCTCGTCTTGGGCCA
AAGCGAAGACTCGTTGGTATCCATCCATGTAGGAGATCCAGTAAACTATGACCTTGTCCT
TCCTCATTTTCTTGGTCTTGACGACAGCTTCGGAAACATCAGCGCTGTCGGAGTCATCAC
TGCTGGAGGAGCAGGGTTCAGGGGACTTGGGAGTCAGTCGTTTGAGGGTGGACGATAGTT
TGGAAGTCACACTGTTGGTTGCAACTAGAGTGGAGTGCTTTACTGAGTGGAAACATACTT
TTTCTTCCCCGTAACCATCTTGCTCGAACTTCGCAGCAAATCCTTGTCCTTTATTATTGT
AGATGTTCCACAACAACTTCCTGTCTTTAGAAGGATCGTCCCACGTGTACAACATCGACT
GATACGGACTGAGGAGAGCCACTTGACCGGAATCCATCTGATGTAATTTGAGGAAGAGAT
CATCG
(2585 bp)

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