SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17635c3_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097233 C alveolar lamellar body membrane
Transcript
Level		FPKM:5.13 TPM:5.02
ORF EntryO_TrvaFAMAMG20936_complete:A_TrvaFAMAMG_TR17635c3_g1_i6
Sequence
(Nucleotide)
TCTGCGTTGAAAACTATTTATTTTTCAAATATTATTGAATAGTTATAAATACCTTGAATT
AATACAGGCCCTATTTTAAGTATTCTTATTCTAATCAGTCTTATACGAAAGTGTCGCTAG
TGAAAATTTATGATTACAAAATAATGGTTTGTTAAATAGTTTCTCTGGGAAAAATCGAGT
GCCTCCACGATGGATTGGCATTCTGTTAAAGTGTTAATGTGGAAGCACCTCGCGGTACGC
ATGCGAAGGTACATCCACACAGTTGTAGAATTTCTCTCGCCAATTGTACTGGTTCTGATC
TTCACGACCTCAGGAGTAATCGATACTCCTCCCGATCATGTCCAGTCGGCAGCCACCTAC
CGTCCAACACGTAATTTAAAAAGTGCAGACATCAAATGTATCTACTACTACCCTGATACG
GAACTCACTAAAACTTTGATGCAGGAAGTCGGAGCAAAAATGCAATTTAAAAAGATAAAT
TGTGGAGGTTCTTACGACTCTGGGTACTGTCCGGTCAAAAATGAATCGTTCTTCAACCAA
CTATCAGACAACTTGTTTGTTAGAGATGCACTTGTTATTTTTAATGATATGTCCGGAGAT
AGTTGGCCAAAGAATTTAGTCTACACTCTACGAATGATGGGCGATTTCGATACGGACCTT
ATTTTTCCGAAAGATGGACGACTAATACCACACTATGTATTCGGTACGGAATATAATCTA
TTCACAAGCATACAATGGGCGATAGATACAAGTTTTATTAAAGTTCGAACCGGCACTGAT
ATTAATTTGGATATATTTTCGCAAGAATTTCCATTTTACTCGTGGAAGAACAGCGGTTTG
TTCATAACCAACATTTTAATTGTATTATGTCAGCTGTCTCTGCTCCTGGTCTTCGTGTTT
CTGATGTCGAGGCTTCTCAACGAAAGATCAACTGGAATACAAGAACTGATGAAAATGGTA
GGAGTATCAAACGGCTGTCTAGTATTCACTCATTTCTTGAACGTTTTACCTGGAGGATTA
TTATACGCTATAGTTATTCCGATATTAATAACAAAGGCGGTGGCTTTGTTCGAAACTACA
GCGGCTGGTTTAATACTCTCGTTCGGGCTGTTTTTGCATTTCGTGAGTTTGGTCGCCGCG
GCATTCGTTTGCAGTTTCCTTGTGAAAAGCACTCAATACGTGGTATCTATATCGGTGCTC
GCGTACGGTGTGATGGCGTATCCCATGTACTGGTTGAGGAACTACCAAATCCCCGGTAAC
TGGAGACTGGTGACCGGTCTACTGCCACATGTGCCTTTGGTGTGGCTCATTGATGAACTG
GCCGCTTTAGATGGATACGGTTACATCGAAATATCATCGATAGTGAAGTCTCACACTAGT
AATAGTTATTCTATAATAGTGAGTTACGTGATGGTGCTGGTACAAATATTGATATTCTTC
ATTCTCAATTGGTACTTATCTTTGGTGAGACCGGGGAAGTATGGACAGGCTTTGCCTTGT
AACTTCTTGTTTAAGAAACAATACTGGATGAAGAATGAAATACGTCCTAAATTCGACATG
GACGCCGAGGAAGAAACACCTATAATAACGGACAAGAGGTACTTCGAGGAACCACCCAAG
AACGTAGAAGTTGGTATCAAGATCTGCAACGTTTCTAAGGTGTTCCCTGGTCAAAAAGCC
TTAGACAACGTATCATTGGACGTGTACAAAGGTGAAATAACAGTTTTGCTCGGACACAAT
GGAGCTGGGAAAACTACGCTTATGTCCATTATAACCGGTATGATGAGCGCCACGGAAGGC
AAGGTGTACGTGAACGGCATGGAGACGGTGTCCCAGCAGCGCGACGTCAGGAAGCACCTC
GGCCTGTGTCCGCAACACAACCTGTTCTTCCCGGACCTTACTGTCATAGAACACGTTATG
TTCTTTACTATGTTACGAGGAAAATCGTACAGCGAAGCGAAAGTATCATCTAAAGCTTTA
CTAGAACAACTGGGTATCGGAGACAAGGCCAACAACAGGAGCTCGGAGCTCTCCGGTGGA
ATGATGCGGCGGCTGCAGCTCGCGTGTGCGCTGGCCGGAGACGCAGACGTGCTCATACTG
GACGAGCCCACCTCGGGGCTGGACGTGGAGACCAGGAGGAGTCTGTGGGACTTGCTGCTG
AACGTGTGCAGCTCCCGCACGGTGCTGCTGTCCACTCACTTCATGGAGGAGGCGGACGCG
CTGGGTCACCGCGCCGCCGCGCTGCACCACGGCAAGCTGCGCTGTCACGCCTCCACCATG
TACCTGAAGAAGGCGATAGGAACCGGCTACCGTCTCTCATTCACAACGATAGGTCTGCCC
AACGAGACAGCCATCACCACCGCCATTACCAACTTCATCCCGGAAGTGACCCTGAAGGAG
AAGTCCCTCAACACGCTGTCGTACGGTCTTCCGGCTACGAGCTGCCAGAAGTTCCCGCAA
TTGTTCCTGGCTTTAGAATCGAATCGATCGAAATTGGGAATCGATTCCATCGGAGTTGGG
GTGTCGACGCTGGAGGAAGTGTTTTTGAAACTTTGCAGTGACGTAGACACGACATTCGGC
GATTCCAACGGCGATAAAAATGTTAATAATGATGCTGCATTCGAATATACAGAGCCACAG
AACAAGAAGCTGACCGGCTTCCCTCTATATTTTAGACAATTTGTTGTTCTCTTCAAAAGG
CAATGCTATTATCTGATGTCGAAGAAAATATCATTCCTTCTACTGCAAGTCTTAATACCT
CTAGTAGTGATAGGAGTTGTCACTAACTCACTGAACAGCGACCCGGAGACAGTGACAGAC
TACGGCGCCCCGATGACGCTCGACCTGTACAGTGATATACCGGATGTACGGGCTTTATAC
AACGTGGATAAAGATGGCGCTAATTTTAATACGATTATAGACGCTTACCCGAAGATAACG
TTTGAGAAAAATAATGATATTAATAATGCAACACTGACTTATTCGAAAGATGATCCAACC
AGTTACGTCAAATATGTATTGGGAGTCGACCTGAATTCTACAACAGCAACGGTCCACTAC
ACAACGACAATACGCCACGCCGCGCCAATATCCGTCAACGTGTTAACCAACTTGTTGGCC
AGTATGTATCTACCGTCATCGCAGGGCAGGTCGATAACCACCATCAACAAGCCGATATCA
AACCGACCGTTCATGGAGCGACCGCCACAACTTGAAACTAAACAGCTACCTGTAGTTATT
ATTTGGATATTCATCGTTATATTCATAATCCTCTCAACGAACGTGAACGCGGTGTCCCTG
CCGTGCAAGGAGCGACTCTCGGGCGCGCGACACACACACATCATGTCCGGATGTCCACCC
TCGCTGTACTGGAGCACCACCCTGCTGTTCCACACGCTGGTCTGCACCGTGGCCCTCATA
GCGCCCACCCTCGTCATGGCGGCCGCCATAGAGCGCGACCACACCATCGACCAGCCGCCG
TTCCTGTTAACAATGTTCCTGATCTTGGAGCTGAGCGTGATGTCGTTCTTCGCCTTCATA
TATTTAGTGAGTTTCCATTTCAACGAGACCGCTTCGGGCGTGTTCCTCTCCGCTGTCGTT
ATTATATTCGGTATCTTCACGCCCCTAATAAGCGTAGTATTCACAATACTAGAAGTGACG
AAAGGCGCCACGTACTACGTGATGTCGATACTGAACTACATAATACCGCCGCAGACCGCC
ATCATGGCGGGCGTCATGGCGTCCGCGCGCGCTGTCAACAACGCTATGTGTAATGTCGAC
GAGATTTACTGCAAGGTTGTTGTAGAAAAACCGGATATAGTGGTGGAAGACATTGATCCG
ACTTGTTACCTGTGCTGGAATGAGTTCACCCCGGCTCGATACGTGTTAGTGCTAGCCGTG
CAGTTCGCAGTACTAATGACGCTGGTGGTTTTGTCGGAGCACGGATACCTGAACGGATGG
TTCGACGCGATCATGAACCACGCGTACAAGGCGCCTCCCGTACGACCCGCCCCGGACCTC
GTGCGCGCCGAGGCCGCCTACGTCACGCAGGCCATCACACTGCCCCCCAACCAAATCAAG
GACGTACTTCTGGCTGATAACTTACACAAGAGGTACCCGAAGATTATCGGTAAATCATGC
AATGCTGTCAAAGGAATCAGTTTCTCGATCAAAAAAGGTGAATGTTTCGGTCTGCTGGGT
GTGAACGGCGCGGGCAAGTCCACCACGTTCAAGATGCTGACGGCCGAGGAGTGCGTCACG
AGGGGGAACATATTCGCGAACGGATACCATCGGAACCGCGACGTTGGACCGTACATCCGC
TCCCTCGGCTACTGTCCTCAGTTCTTCGGTTTAGACGAGTTCCAGACGGGCGCTCAGAAC
TTGGCGCTGCTGCTGACCCTGCGCGGGCTGGACGTGGTGGATGTCAACAATGAGGTCATG
TCGTGGATCAAAATTGTTGGTCTTGAGAAGTACATGCATCGGCGCGTGTCGGGGTACAGC
GGGGGCTGCAAGCGGAGACTGGGGGCAGGCGCGGCGCTCGCGGCCGGAGCACCCCTCACC
GCGCTCGACGAGCCCACCGCCGGCGTGGACGTGGCCGCGCGACGCCGCGTGTGGGCCGCA
CTGCGCCGCGCACTGCACGCACAGCGCGCCGTGCTCATCTCATCGCACAGCATGGACGAG
ATGGACGCCCTGTGCTCGTCCATCGCCATAATGTCCGGCGGCGAGGTGCGCGCGCTGGGG
TCGGGCGCGGCGCTGCGGGCGGCGCACGCGTCGGGACACGCGCTGCTACTCAAGATAAAA
CATAACAACAGCGGGGACGAAGTGGACAGCGCTAAGGCCGAGGTGGATCGTTTGAAAGGA
ATGCTGCATCAGTCGTTTGACTGTACACTTAAAGATGAGCATAAGACAATGCTACACTAC
CACATCAACGAAACAATGAAGTATTCCGACCTCTTCACTCAACTCGAAGATCTGAAGAAC
GACTTCACCGGTCTGGTCGAAGACTACTCCGTCACTGAAACCACTCTGGAAGAGGTGTTC
CTGTCTTTCGCTAAAGAAAACCAAGAACCGGCTACTGTGTGAATGGAATGGTAATTTTTT
TTCTGTTATTTAGGGATGTAACGATTTAATATGATAACGATTCCTAATCGATAATGATTC
CAAATAATTAATTACTTTAGCTTTTCGGTGATGTAGGTCAATCAATAGGAAATTCGAGTC
AAATTCTGACTTTACTCGTACCTAATTCATTTGAAAAAAAACTTTTTAAATACTTTTAAG
ATCCTGGATATCATGTAGCAGTAGTGTTACCTAAGTTAAACAAGTTCAAACACTACGGGT
CTATTTTGTCATATTATTGCATTGCCACGCGATATACATATTATTAGGAATCAGAAGTGG
ACTTCAAAAAAAGAAATATAAGGACACGGAGGTCCTTTCCGTACGAGCGACAACCGACAA
CTGATCCCCACGTCCGCTACACGACGGTTTTTATACTAGTCGGTATGACGTAACACACTC
AGTCTGAACAACCAAGTAAAATAATAAAATCGAAGCTATCAGTTTATTTTAATTATTTCA
TCTTTTATTTTGCTTTGTAATGAGTATATCATTTTTTCAATGTGGCACCTTGTTATTTTT
ACCTAAAACTACATTATTACTATACTTATAAATTTGTTTAGTCTAATTAATAAGACTGTT
ATTTTTGTTTTAATTTTCTATAAATTATTAATTTACTATGAAAGGGGTACAATATTAAGT
ATCAAATAAAGTATTCGGCTGTAGTGTATGTTGACTTAAAAAAATATTAATAAAATAATT
TATATAGGTTACACCATATTTACTAATTAAACACTAGATGAAAAGGCACATGATTCTGTA
AATATATACAGGGTGAGTTTTTAAAGATGGTACATATTGAAGGAAATATATACAGGGTGA
GTTTTTAAAGATGGTACATACATCACCTTGATGAGTACTTTTTCTAATACGGAATATGAA
AAAAAATTGGTGAAATTAGAAAAAAAATAAAAATATTGGAGAAATCTAAATTCGACAAAA
CTACCTCAAACATAAAGAATTTCGGCCAAAAGAGTGCTTACTGACAGCCTCTAGTGATCT
CACGCACCCCACACCTCCACCACAACCATCAGCTGTCGAAAAAACATCATTTCGTCGCCT
CAGTGCT
(6187 bp)

- SilkBase 1999-2023 -