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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17478c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_symplekin_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0035363 C histone locus body
Transcript
Level		FPKM:4.77 TPM:4.68
ORF EntryO_TrvaFAMAMG20852_complete:A_TrvaFAMAMG_TR17478c0_g2_i2
Sequence
(Nucleotide)
AAGAATTTCCGTCCGTTCCGAAGGGGGCTACCCTTTCTATAACGCGTGATAAGGAACTTC
GTTCCAATATTAAGTTTTATTTTAAATTGTGACACTGTTACAAAAAAGCGCGATATTTTC
ATCCTTAGAATTATTACCAAAAACTGTATTCTTGTGTCACAATAGTAATTTAATACCAAG
ACAAACTTATATAGTGACACAATTTGGTGTTAGGTCGTTATATCTGACAATTCTCATTAT
TTAGCGTTATTCCATGCCCGGCGGTAGGGGCTCGATGGGGTTCATCTGTTCATGGCCGAT
ATTAGGCGGGATCATTTGAGGTGTCGGATGAGATGTTATTTGTGGCTGTGTGTATTGAGG
TTCCTGATGGCACAGCGAGGTCACGTGTGCGGGCAGCGCGCTCCGCCGGTCGGGCGTCAT
GGCGGACACGTGCGCGGCCACGGACGCGCGGAGGGAGGGGGTGCGCTGCACCGCGGAGAG
CGCGGCGGAGGGCAGTGACGTCACCAGACTGAAGGATGTCGGCATTAGACGCTCGCAACA
CTTCACCCAGCCCTCCCACGCTACTTTGTTCTTCCATGCCTCCTTTTCAACTAAAAGCTG
CAGAATATTCATGACAAGTGGACTCAGTCCGGGGTATAATGTTAAACTTTGCAGTACAGT
CCTCATCATGAGCACTGGTATCTTTGATTCTTCCACTAGCCTTTGTAAAACTGCTGCCAA
TACATCCTGTGTGAAAATGTTTTTCTCAGCAAAACACAAAGCAGTCGCTTTTATGATATA
CTTGAGATCAGCCTTCTCCGGATCAATGAGGTGCAATTCAAATAACAACTCAGCCGGTGA
CACAGGAGACTGTTCATCGTACTGTTGATTGACTCCTAATAATTTGTTGAATACTTCTTT
CACGACTCCCGGTGTCAATTTGATGAGTTTAGGCAGAGCTGCTGTTATCTCTCTTTTCGT
AAGTCCAGTGAGCACCGGTATCAGGAACCGTACATCCGAGACTCGTGTCGCGTACAGATC
GCGTACTTTTGATACTAATTCAGCTGACGGCGGCGCTTTCTCCGTAAATATATGAACGAG
CCTCGTAAGTAAAGTCTCGGCGCCTCGTGGACATTGCTCTAATAGTGACGTCAGCACACT
GGGCACCTCGTGCGGCGACCCCGTGCGAGGCGACCCCGCCCCGTCGGCCACCCCGGCGGC
GAGGGCCCGGACAGGACCTTCTATAGAGCGCAGTACGACCCGCTTGGCCTCCGGGCCCGC
TATGCCGTATTCGCGGGCTATTTCCATTAGTAATTCTTCTTTAATAGGAAACAAAGCAAC
AACCAAGTTCAGGCATAATTTATAAAGGTTGTCATTCCATAGCATTCGTAGATTTCTCGA
GAACAACTCCGTGGGCGGATGATTCAATGATATAAATCCCAAGTACAGTAATGCGTGTTT
CTCTACCACTTTCTTGACGGATTCCGAACCTTTTTTATAGACTTTAAGAGTGGATTTTAA
TGCTACCTCTCTTATTTCTTCGTTTTCGTTCAAAACATGACACACCAACGACGTCACATA
CTTATGCGCTCGAGGAGGCCTCATAAGACACAACTCTTCAAGCAGTTCCAAAGCCAGCAT
CGCCATACCCTCCTCAGTCACCAAATGTTTCAAATAATCTAAAGCCTCTTCCGTAACTAT
GGGACACTCCAAATATATCTTTCTCATTAAGACTTCTTTACAACTTTCCATAACTGGGTC
TCCTCTCTCGCATATATTAGTGACAAGAGCGCAAAGCAACTGGTTGTAATTTTGATCATG
TTTTTCGTGAACTTTCGGCTGTAATGTCACCGGATGTCGGGTAAAACCTTGCATGAAAGC
ATATTCTTCGTACAACCATTTCAGGGCAAGATTTATCCTGTTAGAGGGATCTTCTAAGAT
GTAACTTAGGACCAAATCTCGGGTATCTGGTGTGTAACTTGAAGCGAATATTGTGATTAA
TTTGGCGCGGATTTGCTCCGCTCCACCGATGATAGCGTATTTTTCCGCGTTAAGTATCCT
TTCGACGGCTTGTATTACTAGTTTTTGCTTGATTTCTTTGGGGATAGGTCGAGTTATTTC
TTGAAGTTTAAGTAATTTCACTTTCTGTTTCAATTTAGGAACTGTTGGAGTCGGAGGCGG
AACTAATTTTTCCTTTTCTTTAGCTCTAAGTTCATCCTCTTTTAAGTGTTCTTGTCTCTT
TTCCTCCATAAGTTTGGAGACAGCCGATTCGATCTGTCGCTCCTTTGTTGTCTCCTGTAA
TTTAGCGACGGCGTTTTTCAATGTTATTTTTTCTTCATCCTCCCTTAGTAGGGGTATTTT
GGCCGCGATTTCTGATAAATTTGGCTGCGTTATTTGCGCTACTGGTTCGACGGGCGGCGG
GACTGGTTGCGGGTTATCCGGTTCGCCTTTTATCAGATCCAGTAACATTTTAGCCAAACT
CCTTTTCTGTACTTTGGAGCCGGAATTAGGTATGGGTTTGTACTCATTTACGAAGGTCGG
AGGCATTTCAGTGGGCAGACAATTCTGTAGGGTCGCCATTACTAGATTGACCACATTGTC
AACAGAATTTAGACCCTCGAATATACTGTCTTCGGTGACTGTCGGCGTTTTTGTACTGGA
TTGGCTGTCGTCATCGTACATGAAGTCACTACGGCTGTTACTATCGCTCCCTTGACTATT
GCTTTGAGGAGAATCGATCCTGAATCGTTTAGCCGGCGTGTCCCCATTCCGGACCTCCCC
TAACCGTTTATTCCGCTTTTCTTTGGGCAAAGCTTTATTTATCTCTTGCGGTGTCATTCC
TATATCCATCAACAATTGAGTCAGTTGCGGCACCATCTCATTCGAATTCGACTGCTTTAT
TAAGTTCAATATTTGCATTTTGAGATGTTTCCGCACAGAATTGACCTGTGATTGGGAAAG
AGTTGGGGGCAATGTCGTGTGCAAATCCCCTAATGCCTGTATGACTCGGGGCAAATATTT
GGGGCGAAATTTTGCTAGAGAACATAATGTAGTCATACAAGCCATAAGGTTCACGCTTGA
TATGTGCTGTGAATTGTGGAATTTCACCAGTAGTTTGAAGATGTGATCAGATTCGTCTTC
AAGCGTATCTCTGTCTATGAAAGGTAGATCATCGGGTAGACCATCCAGGCTGGATTCAGA
ATCCATAACGTCACCAGGGCTTTGACGGAGCACGACTTCCTCGAGAAACTTAATGGAATG
TGTGCGAATACCTTCGTTTTCACTGTCTATCATGTTTAGGACCATTAGCTTCAACTCGGT
AAGATGTTCCCACACCAGTTTCATGTCCGATACCTCGGCTTCACCGTTGCAGATCCACAT
CAGAGTGTTACGGTACATTATACTGGCGGCCTGGATAGCTCTCTTCTGTACCGCTATCAC
TGGGTCTAGTAGGAGCAGACGTAACTGCGGAACGATCTTTGGTAGGTATTCTGAATGTGT
TTTGCTTAATTCTTCGATAAAATACGCGACTTGTTTCTTCACGTCTGTGTTTTTATCGCT
GATATAGCTCAGTATGTTCTCCATATACACAGGAATCATTGTAGAACCCTGGTGCAATAA
TACTTCTATGGTTTTTCTGAGCAAATCCGCCTTTTTGCCACCCTCTGCCATTCCCGCGTC
GTTTATCCATCTTATAAGCTGATTTTGAACAGAAACATTAGACGTTTGACCGTATTTGTT
CGACATTTTGAGTTTATTTGCGCATTGGTGTATACTCCATAAATAACTGGGCCGTTAAAT
TAATTAATTGGCGACAATATTTCAATTCTTTTTCATCAATAAAAGAAACGCTGCTTTTCT
GAAACCGATGCAATAAATTTGATAATGAGGCCAAAATACATGTGGCATTACTGGATTTTA
ATCTTCACAAGTCTGAAAGAGACGTAAAATCCTTTTTACACGTAGCACGACAGAGAAAGC
AATAAATTTACAATCTTTAGAAAAATGTATCTAACATGGTAGCATAATACATCAGTTTGA
CATTGAAAGGTTTGACGTTTCTCAGAGGGTTACCATACCTTTAATTTTCCATGATAAACT
TTCGATTTTTTTCAGTTTTTCTGTAATTTTC
(4111 bp)

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