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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17472c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_polybromo-1_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
Transcript
Level		FPKM:14.31 TPM:14.02
ORF EntryO_TrvaFAMAMG20807_complete:A_TrvaFAMAMG_TR17472c0_g1_i5
Sequence
(Nucleotide)
AATATCGATTATATTGGAAATAAAAGCATAAAAAAAATGTTAGGTCTTACATCTAAAACC
TATATACCATTTATCTGTAAATTCTTGTACAAACACAGGGCATCTTTCATCATGAAATCT
CTTAGAGCACACAGTCCTTTCAAAACCTTTTGATTTTGGTCCATTTTCTGTATGTCTGTT
TCGGCGAGGGTCTTATCATGAGCGAGATAACCACTGATGGCTTCGTCTGTGATCCAGTGT
CCGGGCAGTTTTTGCATGTTGAAATGAGAAGGCTCGGGATTGGCTGGCATTGGAGTTAGA
GATTTCTCCCATGGAGTAATGTATTTTTGCTCTGAATGTAGACCTTCGATATACCTAATA
TACGCCTCAGAATGTGTAACTCGTTGCGCGCGCGGTGGAGCGGTCACAAACAGCGGGTCG
AGACCGGCGCGGGCTGGCGGGGCCGTCGGGATAGTACTGGGACCTTCTGTTGCACCCGGG
GACGGTGTGTTGCGGGCCATTGGGGACATGCCCGATAGAGATGCTCCTGGGGACATCACT
CCGCTGCGTACTACCGGCTTCGGCTTCTTCGATGACATGAAGTTTCTGGATCGTTCGTGC
ACGGCCATGAGTCGTCCGTTGCCCTTGTTGACGTGCAGATCTCTCACGTGTCTCAGCAAA
CGCGGCAGGTTGGGGAAGGGCGCCTGTCCCTTGCGCACGCGCGCACAGTTCCGCCACAGA
CACGGGTACTCGCTGAACGAGCCCCGGTAGTGTTGCTGTATGTGTCCCGCTGCGCTCGCG
CATGATCTGTTTCCACCGTCCCCGATGCAGTGTTCCATGCAATCCGTCAGATCTTCAAAC
TGATAGTCGCAGGTATCCCAGGCGCATTCGTATGTCATTTCCATGGTTGTGTGCGCGGCC
AGCTCCCTCATCTCCTCGGCGAGGCGCGCGGAGGTCTCCTCGTTGCAGCGCGTGGCTCGC
TCCTCCCAGACCTGCTTGGTGGCGGCGGGCAGGGAGCGCCACTCGTTGCCGACGATGCGC
GATATGTCGCCGAACGTAGCCTCAGGGTTGTTAGCTATGACAGCTTTCCTGACTTCGCTC
GAGTACAGAATGTAGCCCGTTACAATCTTCTGTTTCTGTTCTTTCTTCTTCTTGCCGGTG
GCGGGGGTGGCTGCCTGGCTGGTGTTGCGGTCTTGACTTGGAGTCGCACTTAGTGACGGA
TTGTAGGGGTTACTGTTGCCTCCTGTAGAGAGCGGTGTAGCAGGTGAAGCTAATGAAGAG
TCGTCCAACGAATTTTCTAGAATCATCTCGACGTCCTGACTACCGATCGTCGTGTTTATG
AGATTCGTGAACTGGGGCTTGCAGTCCGCAGTATCGAGATTGAGCGTCTGCTGTTGCGGT
TTGTGCGCGAAGGCCGTGGTGGCTGTGAGTACGTCGTGGTTGGACGCGAGCGCGGGCGGA
CCGAGGCGTTTCGGGAAGTAATATATCTCATCAACAGTAACGTCCTTAGTGTGCTCGAAC
TTGCGCAGTCCAGACTTCAGTTTCCTGGCGACTCGATTAGACTCGTCGTAGATGCTCTCG
CAAACGTACACGTCGCCTTCCGATATTTCTGTTGGACGACATTTAAGATAATCTTCGTAG
TCAAGCACAGAACACTTCCCAACGATACCAACGAGAGGGCTTGTGTCGTGAATCGTAGTC
AACAATACCTCTTGTTTGTAAAATGGCTTATTGATGATATTGTTCACTTCTGATGGGAAG
ATCAAAAACGGTCCGCGGAAATAACATTTGTTGTCTCCAGTCTCCCATATAGTATCGACT
TGAGCGATCATCTGTTTCCCGCCTTCAGTGACGACGTACACATAGTCACCGGTTTTGATG
ACTCCCGAACACACAGTGTTGTACTGTTCATAGTACGTGTTCTCATCGTCTGTTCCTAAT
GGATTGTACATTACTACGTCTGGTCTTTCTTTCTCCTGTACATTCTCAAGTATCTCCAAT
TCTGCGAGTTCATCCTTGTGTTTTTCAACTCGTTCACGGAACACGGACACTGTGCGTTGT
GGTTCTAGAGGCACCTCTCTAGGTACAATAGAGACTTCTTTCTCGGGTCCCTCCCACGCT
CTGATCTTCTTAAACCAACGATGTTTAGAGCTGTATCGACTCTCGCACACGTAAACATCT
TTGTCAGCGAAACCTTCAGGTCTAAACTTGAAGTATTCTTTAACGTTCATGACGTAACAC
GGTCCTACGACGCGATCCAACGAGACTGGTCTGAATACTTCCGTTTTAAATACTTCTTGT
TGCAGGAATTTACGCGTTCTAATGTGGAACGTTTCTTGAGGTCTAAAGTAAACATTACAA
TACAACATAGGTACCCCATCGCTGTTAGTCCACAGTCTTTCAACCTGCACTATATTAGGA
TCGAGGTTGCCCTTCTCCGGTTGTACGTATAAGAAGTCTCCTTTACTGTACTGGGATTGT
AAGTTGGCATCGTTTGATGGCATGGAATCGTCGTTGCTTGACCTAGTTTCATCTTCATCA
TCATTTTCCTGCAACAATTTACATTGTTTTATGAGTTCAACGCTAGTGGACATCGTGTCT
CGTGTGAAGGATAGTGCTGGAGACTGCAATGTACCGCGACAGAGCAGGTCTCGTTGATCG
ATGTAGTAGCACTGTAGTTCTACGGAGTCTTCGAATATTTGACTGTCTGTGCGGGATAGG
CGACGGGCTCTTTCGAAAACAGCAAACATGTCTTGTTGGAAATGATCAAGTCGTTTGTAA
AGTCCTTTGTCAAGTCTCCTCTTGACCAAATCTAAGGATATAGCTCGTATCTTCTCGCCG
TTATTCGATTCATCATGTTCTGGCAATTCAGCCATACTGTCTGAATAACATCTCCCTTCT
TCGTCCTGATGATTGTACACAGTAGTGAACAAGTTGAGTAGTAGTTCTTGCACGGCCGCC
GGTACATCGGGCACCGAGTCGTCATCATGACTTAACATCTGTTTAGTTTGTAAACAAACT
CTATGCAATATCAGGGCGTCCTTGTAAATCTGAGAATCCGGTTCGTTATATTTGCAAGCA
TTGTCGAACATCAAAATGAAGTCCGAAGCTAACTCGTTGACCGAATGGTAGGTGTTATTC
TTCAGTTTGTGAGCAATCTTTTCCATGTCTATGGGATTTTTGATGAGCTCATAGTAATCT
GGGTATTCTGTTTTGCTCGGTAGCTTCATGAAGATTAAAGCTAGCTGGCGATTGGCTTTA
GGATCTCTATAATCACGTATAGCATCATACAAAGTCCTCAGTTTCTGTTCAAAAGGCGAC
AACTGCCTAGACTTGGGCTGTGGTTTGTTCATATGCTTAACAGGCGTTTTCCTCTCATAA
TTTCCGTTCAATTCTTTAATTTTCTCATTTAATACGCGTTCCAGTAGATTCGCATCTTCG
TAAACCATAGATCCTTCTTCATTGAAGTGACGACAGTTAGAAAACATCAAACGGAAGTCT
GTTATCATTTCTTCTAGAGAGTTGTAGCGGTCATTCTTGATATTAGCTTCAATAGTCAAC
ATATCGATGGGGCTATCAATAACATTATAGTACTCCGGATACAATTTCTTGCTCGGTTTC
TCCATGAAGAGCAGCATTGGTTGCCTTCCATCGGAACATGTGAATTCGACCAGTTGTCTT
GACACGTAATGTAGTTTCTTCTTGAGCGGCATATTTGGTTTCGGCACTATAGCTGTTGGT
ATCGGAGATTGTGCGGACGGTGGCAAAGGATTTATGCGTGGACGACCTCTAGGTCGCGGA
GTTTGTACTTGCGTTTGATTCTTGACAGATGAAAGACTTTCATCGTCACTTGAAGATGAC
TGAACAATATCTAGAAGTTCTTGAACGCGCTGTTGCATTAATCTTTGCAATTTAACAGCA
TCCTTATAAAGTCTAGAAGTCGGTACATTGTATACTTTAGCATTTTCAAACATAACATTC
ATATCGCCAGCCACTTCAGATAATGTTCCGTAGTTACCGCGACGAATTTTATTTTTTATT
TGATTCAACGACATGGGGTTCTTGATCTCCTTGTAATAGTTAGGGTATTCACGCCGGGAT
GGTAGCTTCCAAAATGATTCGGACATTGGGACGCCACTAGGTCCAAGATGATTCTTGATA
GTCTCAAACAACTTCCATTGTGGTGAATCTTCATTCTCTACTTTGTCTTCGTCACTATCG
GCACTATCTTCTGAATGCTTAACAAAAGCTTCAGTGTCAGTTTCAGGCGGTTCCATGATA
GCTAGAGCCCTGCTTGTCGGCACAGGGCCAACTCTGGATGTGCGTTTGCTGCGAATACGC
TCCGATGTCTTGGCAGGTCCGCTACGACCGTGCTGATCTATCTCTTGTCTGCGTACTGTG
ATTATCTTCTTCAAAGTTTTCGCATCTTTATAAATTTGACTGCCCGGTTCATTGAATTGA
CACGCATTCCTGACCATGAGCATCAAATCTTTTTCCAATTCTCCGATACTTGTGTACTCT
CCACCTTGAATTTTCTGAGCGATTGTTTTCAAGTCGATTGGGGAGTCTATAATACTGAAG
TACTCTGGATAACGTCGTTTCGATGGTATGAATTGAAATGCTGGGTAAAGAGGTCGACCG
TCGATGTTGGCTGTCATAACTGCACTAAATAGTTCTTCATAGACATTATCGTCTTCATTG
TTAGTTGATGTCTCAGACAAGTCCTCTGCCACATCAGATCTTCTGCTTGACGAACCATTG
CGGGAGTACTTTGGTGTTTTCATCTCTTCATCATGTTCTAAAGTTTGTTTAGTATGTAAG
AACAACTTCCAAAGTTCTACAGCATCTTTGTACTCAACAGTATCGGGCTTGTAGAATGCT
TTTGCATTGTTGACAAGCAGTTCAATGTCTGCCGTCAACTCTTCGATGTCCTCGTAGTTG
TCTGTTTTAAGTTTCTGTTGCACTCTAAGCAGATCAATAGGTTGTGAGACAACTTCGTAA
TACTGTGGTTCTTGACGTCTCTTGGGAGCTCGTATAAATGAATCACACAAGAGAGTCCCG
TCATCTTTCTTATGCGATCTTATTGTGTCATAAAGTTGCTGGCATATCTCACTAGGATCT
AACTTCTTCCTCCTCCTGCTGGACGGCGGAGGTCCAGGGTTACTTAGTTCATCACTATCG
TCTCCATCAGCGCCTCGGCTGGCGCCAGAGGACGCTCGGCGTCGCTTGCTCATTACAACA
AAATGCGGCTTTACGGGTCACGAAGAACTTAAGACATTACGCGCCACAGAATAGTTTTGT
TAATTGTAGCTGATGAAAAACTTAGTCAATATGCAAATAAAATGAATTAAAGTAACACTT
AAAAAATTTTAACCATAATTTTCATGTTTATGCTTTGTTTTTTTTTTTTTTTTTTT
(5396 bp)

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