SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17472c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_polybromo-1_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
Transcript
Level		FPKM:0.14 TPM:0.13
ORF EntryO_TrvaFAMAMG20805_3prime_partial:A_TrvaFAMAMG_TR17472c0_g1_i4
Sequence
(Nucleotide)
CTCCTGGGGACATCACTCCGCTGCGTACTACCGGCTTCGGCTTCTTCGATGACATGAAGT
TTCTGGATCGTTCGTGCACGGCCATGAGTCGTCCGTTGCCCTTGTTGACGTGCAGATCTC
TCACGTGTCTCAGCAAACGCGGCAGGTTGGGGAAGGGCGCCTGTCCCTTGCGCACGCGCG
CACAGTTCCGCCACAGACACGGGTACTCGCTGAACGAGCCCCGGTAGTGTTGCTGTATGT
GTCCCGGTTCCAATTTAGGTCTTTTCGGTTCAAGATACGTTCCGATCATGTTTCCACCGT
CCCCGATGCAGTGTTCCATGCAATCCGTCAGATCTTCAAACTGATAGTCGCAGGTATCCC
AGGCGCATTCGTATGTCATTTCCATGGTTGTGTGCGCGGCCAGCTCCCTCATCTCCTCGG
CGAGGCGCGCGGAGGTCTCCTCGTTGCAGCGCGTGGCTCGCTCCTCCCAGACCTGCTTGG
TGGCGGCGGGCAGGGAGCGCCACTCGTTGCCGACGATGCGCGATATGTCGCCGAACGTAG
CCTCAGGGTTGTTAGCTATGACAGCTTTCCTGACTTCGCTCGAGTACAGAATGTAGCCCG
TTACAATCTTCTGTTTCTGTTCTTTCTTCTTCTTGCCGGTGGCGGGGGTGGCTGCCTGGC
TGGTGTTGCGGTCTTGACTTGGAGTCGCACTTAGTGACGGATTGTAGGGGTTACTGTTGC
CTCCTGTAGAGAGCGGTGTAGCAGGTGAAGCTAATGAAGAGTCGTCCAACGAATTTTCTA
GAATCATCTCGACGTCCTGACTACCGATCGTCGTGTTTATGAGATTCGTGAACTGGGGCT
TGCAGTCCGCAGTATCGAGATTGAGCGTCTGCTGTTGCGGTTTGTGCGCGAAGGCCGTGG
TGGCTGTGAGTACGTCGTGGTTGGACGCGAGCGCGGGCGGACCGAGGCGTTTCGGGAAGT
AATATATCTCATCAACAGTAACGTCCTTAGTGTGCTCGAACTTGCGCAGTCCAGACTTCA
GTTTCCTGGCGACTCGATTAGACTCGTCGTAGATGCTCTCGCAAACGTACACGTCGCCTT
CCGATATTTCTGTTGGACGACATTTAAGATAATCTTCGTAGTCAAGCACAGAACACTTCC
CAACGATACCAACGAGAGGGCTTGTGTCGTGAATCGTAGTCAACAATACCTCTTGTTTGT
AAAATGGCTTATTGATGATATTGTTCACTTCTGATGGGAAGATCAAAAACGGTCCGCGGA
AATAACATTTGTTGTCTCCAGTCTCCCATATAGTATCGACTTGAGCGATCATCTGTTTCC
CGCCTTCAGTGACGACGTACACATAGTCACCGGTTTTGATGACTCCCGAACACACAGTGT
TGTACTGTTCATAGTACGTGTTCTCATCGTCTGTTCCTAATGGATTGTACATTACTACGT
CTGGTCTTTCTTTCTCCTGTACATTCTCAAGTATCTCCAATTCTGCGAGTTCATCCTTGT
GTTTTTCAACTCGTTCACGGAACACGGACACTGTGCGTTGTGGTTCTAGAGGCACCTCTC
TAGGTACAATAGAGACTTCTTTCTCGGGTCCCTCCCACGCTCTGATCTTCTTAAACCAAC
GATGTTTAGAGCTGTATCGACTCTCGCACACGTAAACATCTTTGTCAGCGAAACCTTCAG
GTCTAAACTTGAAGTATTCTTTAACGTTCATGACGTAACACGGTCCTACGACGCGATCCA
ACGAGACTGGTCTGAATACTTCCGTTTTAAATACTTCTTGTTGCAGGAATTTACGCGTTC
TAATGTGGAACGTTTCTTGAGGTCTAAAGTAAACATTACAATACAACATAGGTACCCCAT
CGCTGTTAGTCCACAGTCTTTCAACCTGCACTATATTAGGATCGAGGTTGCCCTTCTCCG
GTTGTACGTATAAGAAGTCTCCTTTACTGTACTGGGATTGTAAGTTGGCATCGTTTGATG
GCATGGAATCGTCGTTGCTTGACCTAGTTTCATCTTCATCATCATTTTCCTGCAACAATT
TACATTGTTTTATGAGTTCAACGCTAGTGGACATCGTGTCTCGTGTGAAGGATAGTGCTG
GAGACTGCAATGTACCGCGACAGAGCAGGTCTCGTTGATCGATGTAGTAGCACTGTAGTT
CTACGGAGTCTTCGAATATTTGACTGTCTGTGCGGGATAGGCGACGGGCTCTTTCGAAAA
CAGCAAACATGTCTTGTTGGAAATGATCAAGTCGTTTGTAAAGTCCTTTGTCAAGTCTCC
TCTTGACCAAATCTAAGGATATAGCTCGTATCTTCTCGCCGTTATTCGATTCATCATGTT
CTGGCAATTCAGCCATACTGTCTGAATAACATCTCCCTTCTTCGTCCTGATGATTGTACA
CAGTAGTGAACAAGTTGAGTAGTAGTTCTTGCACGGCCGCCGGTACATCGGGCACCGAGT
CGTCATCATGACTTAACATCTGTTTAGTTTGTAAACAAACTCTATGCAATATCAGGGCGT
CCTTGTAAATCTGAGAATCCGGTTCGTTATATTTGCAAGCATTGTCGAACATCAAAATGA
AGTCCGAAGCTAACTCGTTGACCGAATGGTAGGTGTTATTCTTCAGTTTGTGAGCAATCT
TTTCCATGTCTATGGGATTTTTGATGAGCTCATAGTAATCTGGGTATTCTGTTTTGCTCG
GTAGCTTCATGAAGATTAAAGCTAGCTGGCGATTGGCTTTAGGATCTCTATAATCACGTA
TAGCATCATACAAAGTCCTCAGTTTCTGTTCAAAAGGCGACAACTGCCTAGACTTGGGCT
GTGGTTTGTTCATATGCTTAACAGGCGTTTTCCTCTCATAATTTCCGTTCAATTCTTTAA
TTTTCTCATTTAATACGCGTTCCAGTAGATTCGCATCTTCGTAAACCATAGATCCTTCTT
CATTGAAGTGACGACAGTTAGAAAACATCAAACGGAAGTCTGTTATCATTTCTTCTAGAG
AGTTGTAGCGGTCATTCTTGATATTAGCTTCAATAGTCAACATATCGATGGGGCTATCAA
TAACATTATAGTACTCCGGATACAATTTCTTGCTCGGTTTCTCCATGAAGAGCAGCATTG
GTTGCCTTCCATCGGAACATGTGAATTCGACCAGTTGTCTTGACACGTAATGTAGTTTCT
TCTTGAGCGGCATATTTGGTTTCGGCACTATAGCTGTTGGTATCGGAGATTGTGCGGACG
GTGGCAAAGGATTTATGCGTGGACGACCTCTAGGTCGCGGAGTTTGTACTTGCGTTTGAT
TCTTGACAGATGAAAGACTTTCATCGTCACTTGAAGATGACTGAACAATATCTAGAAGTT
CTTGAACGCGCTGTTGCATTAATCTTTGCAATTTAACAGCATCCTTATAAAGTCTAGAAG
TCGGTACATTGTATACTTTAGCATTTTCAAACATAACATTCATATCGCCAGCCACTTCAG
ATAATGTTCCGTAGTTACCGCGACGAATTTTATTTTTTATTTGATTCAACGACATGGGGT
TCTTGATCTCCTTGTAATAGTTAGGGTATTCACGCCGGGATGGTAGCTTCCAAAATGATT
CGGACATTGGGACGCCACTAGGTCCAAGATGATTCTTGATAGTCTCAAACAACTTCCATT
GTGGTGAATCTTCATTCTCTACTTTGTCTTCGTCACTATCGGCACTATCTTCTGAATGCT
TAACAAAAGCTTCAGTGTCAGTTTCAGGCGGTTCCATGATAGCTAGAGCCCTGCTTGTCG
GCACAGGGCCAACTCTGGATGTGCGTTTGCTGCGAATACGCTCCGATGTCTTGGCAGGTC
CGCTACGACCGTGCTGATCTATCTCTTGTCTGCGTACTGTGATTATCTTCTTCAAAGTTT
TCGCATCTTTATAAATTTGACTGCCCGGTTCATTGAATTGACACGCATTCCTGACCATGA
GCATCAAATCTTTTTCCAATTCTCCGATACTTGTGTACTCTCCACCTTGAATTTTCTGAG
CGATTGTTTTCAAGTCGATTGGGGAGTCTATAATACTGAAGTACTCTGGATAACGTCGTT
TCGATGGTATGAATTGAAATGCTGGGTAAAGAGGTCGACCGTCGATGTTGGCTGTCATAA
CTGCACTAAATAGTTCTTCATAGACATTATCGTCTTCATTGTTAGTTGATGTCTCAGACA
AGTCCTCTGCCACATCAGATCTTCTGCTTGACGAACCATTGCGGGAGTACTTTGGTGTTT
TCATCTCTTCATCATGTTCTAAAGTTTGTTTAGTATGTAAGAACAACTTCCAAAGTTCTA
CAGCATCTTTGTACTCAACAGTATCGGGCTTGTAGAATGCTTTTGCATTGTTGACAAGCA
GTTCAATGTCTGCCGTCAACTCTTCGATGTCCTCGTAGTTGTCTGTTTTAAGTTTCTGTT
GCACTCTAAGCAGATCAATAGGTTGTGAGACAACTTCGTAATACTGTGGTTCTTGACGTC
TCTTGGGAGCTCGTATAAATGAATCACACAAGAGAGTCCCGTCATCTTTCTTATGCGATC
TTATTGTGTCATAAAGTTGCTGGCATATCTCACTAGGATCTAACTTCTTCCTCCTCCTGC
TGGACGGCGGAGGTCCAGGGTTACTTAGTTCATCACTATCGTCTCCATCAGCGCCTCGGC
TGGCGCCAGAGGACGCTCGGCGTCGCTTGCTCATTACAACAAAATGCGGCTTTACGGGTC
ACGAAGAACTTAAGACATTACGCGCCACAGAATAGTTTTGTTAATTGTAGCTGATGAAAA
ACTTAGTCAATATGCAAATAAAATGAATTAAAGTAACACTTAAAAAATTTTAACCATAAT
TTTCATGTTTATGCTTTGTTTTTTTTTTTTTTTTTTT
(4897 bp)

- SilkBase 1999-2023 -