SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR17465c1_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIH_subunit_1_[Bombyx_mori]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
Transcript
Level		FPKM:0.69 TPM:0.67
ORF EntryO_TrvaFAMAMG20771_5prime_partial:A_TrvaFAMAMG_TR17465c1_g2_i2
Sequence
(Nucleotide)
TTCACCCCACGTCAAACCGTCCAAAGCCACAGATCCACCCTGTATAAAACATCTTTCAAG
CAATTGATGTCATCAAATTTTTAACGACAGCAAAAATCTAATCCGTACACTCACGTTTAC
CCGACTCGACTTAACTCGACTTGGTCGCATCACCCTACTCACCTCAAAAGGCCGTAACTT
CAAATTCCTAAATCTCAGCAACGCGTCATAGAACATAGTGGCTCTCGGAATCGCTTCCGG
GTCGTTAGACGGCGCGCCGGGCTGAGGGAAACTGCGCCACAACTCTCGAGCTAACTCACC
ACAAGACGCGTACAGCCTTTGTAACTCGGCTTTGACGTCCAGTGGTATTAATTGTGCCAT
GGAGGAAGCGTGATGGTGCCGCATGAGAGCGCCGCCCGGACTGAGCTCGCCCAGCGCGCC
CACCGCCGCGCCCGCCCCCACGCGCACCGGCCGCGAGCACTGCTGGCCGCTGCTCCACGC
CTGACATACTGACGCTAATGCTGAGAGAGGCGGTGGGTTACTCGTGTGAACACTCGTTTG
ACTTATCTGATACGATGGACCTAATAAATATCTTTCTACCTTAGATAATTTTAATTCTTG
TACATCATCATTTCCTGTGTCCGAAACTAAATCTTCATAATGTATCTGTTCCATTATTCT
TTTTTTCTTGTCGACCGGTTCCGTTGTACTAGGTTCTTCTGCGGGCCTTTTCGTTACTCC
GTTTGTATTTTTAACACCGTTTTCTATCACTTTATTGTTATTATTCGATGTTTTACTACT
ATTGTCTTTATTACTATTACTAGAATTTGATTTTTGACTAGCTTTGAGCACCATAATAGA
GTGTTGGTTGAATCGTTTTATCATATTCCTGTGTATAGAATTATTGTCAGATCGATCTTT
TTCATTACTAGTTTCTTCTTCTGTAGGTAACAATGGTATTGGTTCAATAAATTTATTTAA
ATCAACAGTAATATCTAAGGTAGTATGTTTCATTGCCGATGCGATAGCATGGT
(1013 bp)

- SilkBase 1999-2023 -